RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 LMNTD1Q8N9Z9 388 aa16.84■□□□□ 0.29
PCDHGC3-205ENST00000617641 OR2L2Q8NH16 312 aa16.84■□□□□ 0.29
PCDHGC3-205ENST00000617641 OR56A3Q8NH54 315 aa16.84■□□□□ 0.29
PCDHGC3-205ENST00000617641 PKP2Q99959 881 aa16.84■□□□□ 0.29
PCDHGC3-205ENST00000617641 KLHL4Q9C0H6 718 aa16.84■□□□□ 0.29
PCDHGC3-205ENST00000617641 RIMS3Q9UJD0 308 aa16.84■□□□□ 0.29
PCDHGC3-205ENST00000617641 EYSQ5T1H1 3165 aa16.83■□□□□ 0.29
PCDHGC3-205ENST00000617641 TCRBV3S1A0A5B6 114 aa16.83■□□□□ 0.28
PCDHGC3-205ENST00000617641 RNASEH2AO75792 299 aaKnown RBP16.83■□□□□ 0.28
PCDHGC3-205ENST00000617641 C5AR1P21730 350 aa16.83■□□□□ 0.28
PCDHGC3-205ENST00000617641 TNFRSF4P43489 277 aa16.83■□□□□ 0.28
PCDHGC3-205ENST00000617641 CDK3Q00526 305 aa16.83■□□□□ 0.28
PCDHGC3-205ENST00000617641 RHDQ02161 417 aa16.83■□□□□ 0.28
PCDHGC3-205ENST00000617641 ADGRE1Q14246 886 aa16.83■□□□□ 0.28
PCDHGC3-205ENST00000617641 FAM174BQ3ZCQ3 159 aa16.83■□□□□ 0.28
PCDHGC3-205ENST00000617641 NANOGP8Q6NSW7 305 aa16.83■□□□□ 0.28
PCDHGC3-205ENST00000617641 DLEU7Q6UYE1 221 aa16.83■□□□□ 0.28
PCDHGC3-205ENST00000617641 KLHDC8AQ8IYD2 350 aa16.83■□□□□ 0.28
PCDHGC3-205ENST00000617641 SPDYE1Q8NFV5 336 aaPredicted RBP16.83■□□□□ 0.28
PCDHGC3-205ENST00000617641 HM13Q8TCT9 377 aa16.83■□□□□ 0.28
PCDHGC3-205ENST00000617641 CSGALNACT1Q8TDX6 532 aa16.83■□□□□ 0.28
PCDHGC3-205ENST00000617641 ZNF480Q8WV37 535 aa16.83■□□□□ 0.28
PCDHGC3-205ENST00000617641 NANOGQ9H9S0 305 aa16.83■□□□□ 0.28
PCDHGC3-205ENST00000617641 MBNL1Q9NR56 388 aaKnown RBP16.83■□□□□ 0.28
PCDHGC3-205ENST00000617641 C17orf113A0A1B0GUU1 675 aa16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 MGAT4DA6NG13 374 aa16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 IFRD1O00458 451 aaPredicted RBP16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 LTBRP36941 435 aa16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 MTHFRP42898 656 aa16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 GSK3BP49841 420 aa16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 RPS14P62263 151 aaKnown RBP16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 GRAMD1BQ3KR37 738 aa16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 IFNEQ86WN2 208 aa16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 KLK6Q92876 244 aa16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 APIPQ96GX9 242 aa16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 LRGUKQ96M69 825 aa16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 PPM1MQ96MI6 270 aa16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 SLC6A17Q9H1V8 727 aa16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 VCX3BQ9H321 246 aa16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 LRCH1Q9Y2L9 728 aa16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 DOCK9Q9BZ29 2069 aa16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 EIF4E1BA6NMX2 242 aaKnown RBP16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 UGDHO60701 494 aa16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 STAMBPO95630 424 aa16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 GRIA3P42263 894 aa16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 LIPEQ05469 1076 aa16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 SPANXN4Q5MJ08 99 aa16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 OGFRL1Q5TC84 451 aaPredicted RBP16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 ZNF776Q68DI1 518 aaPredicted RBP16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 MTSS1LQ765P7 747 aa16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 PDSS2Q86YH6 399 aa16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 EGFL6Q8IUX8 553 aa16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 SYTL1Q8IYJ3 562 aa16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 FBXO15Q8NCQ5 510 aaPredicted RBP16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 SLCO4A1Q96BD0 722 aa16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 CMTM7Q96FZ5 175 aa16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 MAGEB10Q96LZ2 347 aaPredicted RBP16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 MKRN2Q9H000 416 aaKnown RBP16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 ALG2Q9H553 416 aa16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 CLMPQ9H6B4 373 aa16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 SLC23A2Q9UGH3 650 aa16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 ZFR2Q9UPR6 939 aaKnown RBP16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 AP4S1Q9Y587 144 aa16.82■□□□□ 0.28
PCDHGC3-205ENST00000617641 PRR23AA6NEV1 266 aa16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 GRXCR2A6NFK2 248 aa16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 ZNF839A8K0R7 811 aa16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 SOX11P35716 441 aa16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 BNIP2Q12982 314 aa16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 TSTA3Q13630 321 aaPredicted RBP16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 HTR4Q13639 388 aa16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 DDX39BQ13838 428 aaKnown RBP16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 FGL2Q14314 439 aa16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 HID1Q8IV36 788 aa16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 OR2T34Q8NGX1 318 aa16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 OR2T3Q8NH03 318 aa16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 GANCQ8TET4 914 aa16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 SLC13A3Q8WWT9 602 aa16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 MTERF1Q99551 399 aaKnown RBP16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 TM7SF3Q9NS93 570 aa16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 USP22Q9UPT9 525 aa16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 NPPAP01160 153 aa16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 PRPH2P23942 346 aa16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 TACR1P25103 407 aa16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 ACADLP28330 430 aa16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 AQP4P55087 323 aa16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 TBPL1P62380 186 aa16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 INPP5AQ14642 412 aa16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 STARD3Q14849 445 aa16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 GRHL2Q6ISB3 625 aa16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 OR9A1PQ8NGU1 263 aa16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 WDR20Q8TBZ3 569 aa16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 APOLD1Q96LR9 279 aa16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 TSSK3Q96PN8 268 aa16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 KCTD14Q9BQ13 255 aaPredicted RBP16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 ZDHHC5Q9C0B5 715 aa16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 OR52A5Q9H2C5 316 aa16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 DPEP2Q9H4A9 486 aa16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 PIF1Q9H611 641 aa16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 OR1A2Q9Y585 309 aa16.81■□□□□ 0.28
PCDHGC3-205ENST00000617641 CCDC85CA6NKD9 419 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms