RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 TMPRSS11AQ6ZMR5 421 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 CEP68Q76N32 757 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 BEND5Q7L4P6 421 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 CYP2U1Q7Z449 544 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 METTL4Q8N3J2 472 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 MINDY2Q8NBR6 621 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 DIRAS2Q96HU8 199 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 ZBED3Q96IU2 234 aaPredicted RBP11.51□□□□□ -0.57
CDH5-208ENST00000614547 ATOH8Q96SQ7 321 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 ADGRE3Q9BY15 652 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 MOV10Q9HCE1 1003 aaKnown RBP11.51□□□□□ -0.57
CDH5-208ENST00000614547 FAM105AQ9NUU6 356 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 NUFIP1Q9UHK0 495 aaKnown RBP11.51□□□□□ -0.57
CDH5-208ENST00000614547 PCTPQ9UKL6 214 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 PCDHGA10Q9Y5H3 936 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 SBF2Q86WG5 1849 aa11.51□□□□□ -0.57
CDH5-208ENST00000614547 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.5□□□□□ -0.57
CDH5-208ENST00000614547 PCP4L1A6NKN8 68 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 TNFRSF11BO00300 401 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 FFAR2O15552 330 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 PLOD3O60568 738 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 FDXRP22570 491 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 HOXD11P31277 338 aaPredicted RBP11.5□□□□□ -0.57
CDH5-208ENST00000614547 MLLT6P55198 1093 aaPredicted RBP11.5□□□□□ -0.57
CDH5-208ENST00000614547 CCL23P55773 120 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 RPS14P62263 151 aaKnown RBP11.5□□□□□ -0.57
CDH5-208ENST00000614547 RPS24P62847 133 aaKnown RBP11.5□□□□□ -0.57
CDH5-208ENST00000614547 ZNF177Q13360 481 aaPredicted RBP11.5□□□□□ -0.57
CDH5-208ENST00000614547 BCL7AQ4VC05 210 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 TRIQKQ629K1 86 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 RGMBQ6NW40 437 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 CNTN4Q8IWV2 1026 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 PIANPQ8IYJ0 282 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 VANGL1Q8TAA9 524 aaPredicted RBP11.5□□□□□ -0.57
CDH5-208ENST00000614547 IMP4Q96G21 291 aaKnown RBP11.5□□□□□ -0.57
CDH5-208ENST00000614547 C16orf70Q9BSU1 422 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 MIOSQ9NXC5 875 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 SAMD4AQ9UPU9 718 aaKnown RBP11.5□□□□□ -0.57
CDH5-208ENST00000614547 CARD8Q9Y2G2 431 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 IFT52Q9Y366 437 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 TCRBV5S2A0A599 114 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 MGAT4DA6NG13 374 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 SSX4O60224 188 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 ELNP15502 786 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 RRM2P31350 389 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 SSTR4P31391 388 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 IFNA8P32881 189 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 CASP3P42574 277 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 TTPAP49638 278 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 CXCL17Q6UXB2 119 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 PTCHD4Q6ZW05 846 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 SLC38A4Q969I6 547 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 IGSF8Q969P0 613 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 HSH2DQ96JZ2 352 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 MBOAT4Q96T53 435 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 MTERF1Q99551 399 aaKnown RBP11.5□□□□□ -0.57
CDH5-208ENST00000614547 NUSAP1Q9BXS6 441 aaKnown RBP11.5□□□□□ -0.57
CDH5-208ENST00000614547 GPBP1L1Q9HC44 474 aaPredicted RBP11.5□□□□□ -0.57
CDH5-208ENST00000614547 RAD18Q9NS91 495 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 SPO11Q9Y5K1 396 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 TNPO3Q9Y5L0 923 aaKnown RBP11.5□□□□□ -0.57
CDH5-208ENST00000614547 POLR2AP24928 1970 aaKnown RBP11.5□□□□□ -0.57
CDH5-208ENST00000614547 TTC3P53804 2025 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 ASPDHA6ND91 283 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 MEN1O00255 615 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 AXIN1O15169 862 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 SUV39H1O43463 412 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 ALPIP09923 528 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 ENGP17813 658 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 KIR3DL1P43629 444 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 MAD2L1Q13257 205 aaPredicted RBP11.5□□□□□ -0.57
CDH5-208ENST00000614547 CTF1Q16619 201 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 Q6ZSR9 355 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 TLK2Q86UE8 772 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 LYSMD2Q8IV50 215 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 RGL4Q8IZJ4 473 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 TMEM86AQ8N2M4 240 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 C3orf58Q8NDZ4 430 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 SGIP1Q9BQI5 828 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 HDHD2Q9H0R4 259 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 CRISPLD1Q9H336 500 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 TAS2R9Q9NYW1 312 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 ADAMTS5Q9UNA0 930 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 PRELID1Q9Y255 219 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 VPS9D1Q9Y2B5 631 aa11.5□□□□□ -0.57
CDH5-208ENST00000614547 KIAA1217Q5T5P2 1943 aa11.49□□□□□ -0.57
CDH5-208ENST00000614547 LCHNA4D1U4 455 aa11.49□□□□□ -0.57
CDH5-208ENST00000614547 H3BM21 787 aa11.49□□□□□ -0.57
CDH5-208ENST00000614547 EIF2S1P05198 315 aaKnown RBP11.49□□□□□ -0.57
CDH5-208ENST00000614547 FGF4P08620 206 aa11.49□□□□□ -0.57
CDH5-208ENST00000614547 KRT20P35900 424 aa11.49□□□□□ -0.57
CDH5-208ENST00000614547 ZNF135P52742 658 aaPredicted RBP11.49□□□□□ -0.57
CDH5-208ENST00000614547 SRP54P61011 504 aaKnown RBP11.49□□□□□ -0.57
CDH5-208ENST00000614547 NKX3-2P78367 333 aa11.49□□□□□ -0.57
CDH5-208ENST00000614547 DPY19L1Q2PZI1 675 aa11.49□□□□□ -0.57
CDH5-208ENST00000614547 KDELC1Q6UW63 502 aa11.49□□□□□ -0.57
CDH5-208ENST00000614547 USP43Q70EL4 1123 aa11.49□□□□□ -0.57
CDH5-208ENST00000614547 ADAMTSL2Q86TH1 951 aa11.49□□□□□ -0.57
CDH5-208ENST00000614547 DENND1CQ8IV53 801 aa11.49□□□□□ -0.57
CDH5-208ENST00000614547 STK40Q8N2I9 435 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms