RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 TAGLN3Q9UI15 199 aa8.6□□□□□ -1.03
SMAD4-217ENST00000611848 FBXO5Q9UKT4 447 aa8.6□□□□□ -1.03
SMAD4-217ENST00000611848 RUVBL2Q9Y230 463 aaKnown RBP8.6□□□□□ -1.03
SMAD4-217ENST00000611848 WDR37Q9Y2I8 494 aa8.6□□□□□ -1.03
SMAD4-217ENST00000611848 ACOT9Q9Y305 439 aa8.6□□□□□ -1.03
SMAD4-217ENST00000611848 PCDHB1Q9Y5F3 818 aa8.6□□□□□ -1.03
SMAD4-217ENST00000611848 A0A087X1B8 175 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 UBA6A0AVT1 1052 aaPredicted RBP8.59□□□□□ -1.03
SMAD4-217ENST00000611848 MED19A0JLT2 244 aaPredicted RBP8.59□□□□□ -1.03
SMAD4-217ENST00000611848 FAM221BA6H8Z2 402 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 IFRD1O00458 451 aaPredicted RBP8.59□□□□□ -1.03
SMAD4-217ENST00000611848 NTN3O00634 580 aaPredicted RBP8.59□□□□□ -1.03
SMAD4-217ENST00000611848 KPNA5O15131 536 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 PHGDHO43175 533 aaKnown RBP8.59□□□□□ -1.03
SMAD4-217ENST00000611848 B4GAT1O43505 415 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 HYAL3O43820 417 aaPredicted RBP8.59□□□□□ -1.03
SMAD4-217ENST00000611848 KLHL2O95198 593 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 ESR1P03372 595 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 RPLP0P05388 317 aaKnown RBP8.59□□□□□ -1.03
SMAD4-217ENST00000611848 SLC35G4P0C7Q5 338 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 JUPP14923 745 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 STMN1P16949 149 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 ALDH4A1P30038 563 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 LEPRP48357 1165 aaKnown RBP8.59□□□□□ -1.03
SMAD4-217ENST00000611848 HK2P52789 917 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 CCL7P80098 99 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 GPLD1P80108 840 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 SPIDRQ14159 915 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 KIF26BQ2KJY2 2108 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 TSNAXIP1Q2TAA8 658 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 LIPMQ5VYY2 423 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 PTRHD1Q6GMV3 140 aaKnown RBP8.59□□□□□ -1.03
SMAD4-217ENST00000611848 EPGNQ6UW88 154 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 TMEM26Q6ZUK4 368 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 RAPH1Q70E73 1250 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 CEP97Q8IW35 865 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 TEX9Q8N6V9 391 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 Q8N9G6 341 aaPredicted RBP8.59□□□□□ -1.03
SMAD4-217ENST00000611848 CFAP61Q8NHU2 1237 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 ZFPM2Q8WW38 1151 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 ELMO1Q92556 727 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 LPGAT1Q92604 370 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 CXorf40BQ96DE9 158 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 RILPQ96NA2 401 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 TSNARE1Q96NA8 513 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 DEPDC7Q96QD5 511 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 GFM1Q96RP9 751 aaKnown RBP8.59□□□□□ -1.03
SMAD4-217ENST00000611848 SCNM1Q9BWG6 230 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 GATA5Q9BWX5 397 aaPredicted RBP8.59□□□□□ -1.03
SMAD4-217ENST00000611848 DRC3Q9H069 523 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 DENND2DQ9H6A0 471 aaPredicted RBP8.59□□□□□ -1.03
SMAD4-217ENST00000611848 ZNF624Q9P2J8 865 aaPredicted RBP8.59□□□□□ -1.03
SMAD4-217ENST00000611848 FAM8A1Q9UBU6 413 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 WASF3Q9UPY6 502 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 CLCA2Q9UQC9 943 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 NEUROG3Q9Y4Z2 214 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 HEBP2Q9Y5Z4 205 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 CEP295Q9C0D2 2601 aa8.59□□□□□ -1.03
SMAD4-217ENST00000611848 A0A1W2PQM1 296 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 SLC5A10A0PJK1 596 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 LILRA5A6NI73 299 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 OR52A4PA6NMU1 304 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 PEX11AO75192 247 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 HSPA4LO95757 839 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 S1PR4O95977 384 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 NDUFS1P28331 727 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 FMO4P31512 558 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 CCNG1P51959 295 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 EPHA4P54764 986 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 ALDH18A1P54886 795 aaKnown RBP8.58□□□□□ -1.04
SMAD4-217ENST00000611848 OR1D5P58170 312 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 TAS2R39P59534 338 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 SQSTM1Q13501 440 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 RPE65Q16518 533 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 SYTL3Q4VX76 610 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 CAPRIN2Q6IMN6 1127 aaKnown RBP8.58□□□□□ -1.04
SMAD4-217ENST00000611848 LRRC8EQ6NSJ5 796 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 CNSTQ6PJW8 725 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 XKR5Q6UX68 686 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 RBM44Q6ZP01 1051 aaKnown RBP8.58□□□□□ -1.04
SMAD4-217ENST00000611848 LILRA3Q8N6C8 439 aaPredicted RBP8.58□□□□□ -1.04
SMAD4-217ENST00000611848 ENDOVQ8N8Q3 282 aaKnown RBP8.58□□□□□ -1.04
SMAD4-217ENST00000611848 DCBLD1Q8N8Z6 715 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 KCTD4Q8WVF5 259 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 ASZ1Q8WWH4 475 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 TMEM159Q96B96 161 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 C12orf66Q96MD2 445 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 BIRC8Q96P09 236 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 INSM2Q96T92 566 aaPredicted RBP8.58□□□□□ -1.04
SMAD4-217ENST00000611848 DPYSL5Q9BPU6 564 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 C1orf21Q9H246 121 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 OR52A5Q9H2C5 316 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 CCDC68Q9H2F9 335 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 EPB41L1Q9H4G0 881 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 RNPEPL1Q9HAU8 725 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.58□□□□□ -1.04
SMAD4-217ENST00000611848 CPSF2Q9P2I0 782 aaKnown RBP8.58□□□□□ -1.04
SMAD4-217ENST00000611848 ANGPTL2Q9UKU9 493 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 PSMD13Q9UNM6 376 aa8.58□□□□□ -1.04
SMAD4-217ENST00000611848 CRYL1Q9Y2S2 319 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms