RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 CCDC90BQ9GZT6 254 aa5.7□□□□□ -1.5
LSM1P2-201ENST00000604911 UPF3AQ9H1J1 476 aaKnown RBP5.7□□□□□ -1.5
LSM1P2-201ENST00000604911 OR52A5Q9H2C5 316 aa5.7□□□□□ -1.5
LSM1P2-201ENST00000604911 KLHL31Q9H511 634 aa5.7□□□□□ -1.5
LSM1P2-201ENST00000604911 OPA3Q9H6K4 179 aa5.7□□□□□ -1.5
LSM1P2-201ENST00000604911 ZNF696Q9H7X3 374 aa5.7□□□□□ -1.5
LSM1P2-201ENST00000604911 ZNF556Q9HAH1 456 aa5.7□□□□□ -1.5
LSM1P2-201ENST00000604911 ADAP2Q9NPF8 381 aa5.7□□□□□ -1.5
LSM1P2-201ENST00000604911 XPNPEP1Q9NQW7 623 aa5.7□□□□□ -1.5
LSM1P2-201ENST00000604911 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.7□□□□□ -1.5
LSM1P2-201ENST00000604911 CENPMQ9NSP4 180 aa5.7□□□□□ -1.5
LSM1P2-201ENST00000604911 SIRT3Q9NTG7 399 aaPredicted RBP5.7□□□□□ -1.5
LSM1P2-201ENST00000604911 EPHA6Q9UF33 1036 aa5.7□□□□□ -1.5
LSM1P2-201ENST00000604911 NDOR1Q9UHB4 597 aa5.7□□□□□ -1.5
LSM1P2-201ENST00000604911 FBXL7Q9UJT9 491 aa5.7□□□□□ -1.5
LSM1P2-201ENST00000604911 DBNLQ9UJU6 430 aaKnown RBP5.7□□□□□ -1.5
LSM1P2-201ENST00000604911 MGAT4AQ9UM21 535 aa5.7□□□□□ -1.5
LSM1P2-201ENST00000604911 ADAMTS5Q9UNA0 930 aa5.7□□□□□ -1.5
LSM1P2-201ENST00000604911 KCNK7Q9Y2U2 307 aa5.7□□□□□ -1.5
LSM1P2-201ENST00000604911 NDUFAF1Q9Y375 327 aa5.7□□□□□ -1.5
LSM1P2-201ENST00000604911 TESMINQ9Y4I5 508 aa5.7□□□□□ -1.5
LSM1P2-201ENST00000604911 ACTL7AQ9Y615 435 aa5.7□□□□□ -1.5
LSM1P2-201ENST00000604911 ZHX2Q9Y6X8 837 aa5.7□□□□□ -1.5
LSM1P2-201ENST00000604911 UGGT2Q9NYU1 1516 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 A0A0A6YYH2 397 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 A0A1W2PPQ1 181 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 LINC00862A6NCI5 91 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 A6NJ64 397 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 SMIM23A6NLE4 172 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 ZNF716A6NP11 495 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 EFCAB7A8K855 629 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 H7C1D1 291 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 I3L4J1 428 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 ZBTB5O15062 677 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 TBX1O43435 398 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 KCNAB3O43448 404 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 ITM2AO43736 263 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 CHP2O43745 196 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 VEGFDO43915 354 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 DPM1O60762 260 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 TBX10O75333 385 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 TNFAIP8O95379 198 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 PGK1P00558 417 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 F10P00742 488 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 LDLRP01130 860 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 IL1BP01584 269 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 EPOP01588 193 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 LTFP02788 710 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 IFNA6P05013 189 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 HOXD4P09016 255 aaPredicted RBP5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 FAM86B2P0C5J1 330 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 ZNF735P0CB33 412 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 CDH1P12830 882 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 NCF1P14598 390 aaPredicted RBP5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 XRCC1P18887 633 aaPredicted RBP5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 DDCP20711 480 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 ABCB4P21439 1286 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 PTAFRP25105 342 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 PSMB6P28072 239 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 RORAP35398 523 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 GPR4P46093 362 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 CEBPDP49716 269 aaPredicted RBP5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 ARSEP51690 589 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 CLDN8P56748 225 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 OR2B6P58173 313 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 RPS8P62241 208 aaKnown RBP5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 ERVK-8P63133 956 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 MC1RQ01726 317 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 CNTN2Q02246 1040 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 CHRNDQ07001 517 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 GAGE1Q13065 139 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 LCP2Q13094 533 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 CBFBQ13951 182 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 PIGHQ14442 188 aaPredicted RBP5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 ZNF273Q14593 569 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 DRAP1Q14919 205 aaPredicted RBP5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 PDK1Q15118 436 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 CNN3Q15417 329 aaKnown RBP5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 HKDC1Q2TB90 917 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 CERKLQ49MI3 558 aaPredicted RBP5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 LRRC24Q50LG9 513 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 EMC4Q5J8M3 183 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 PPM1LQ5SGD2 360 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 TMEM240Q5SV17 173 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 LCN1P1Q5VSP4 162 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 PRAMEF18Q5VWM3 479 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 LIPJQ5W064 366 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 PAPD7Q5XG87 772 aaKnown RBP5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 NAPEPLDQ6IQ20 393 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 RPL13AP3Q6NVV1 102 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 USP45Q70EL2 814 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 FKBP9P1Q75LS8 142 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 TRMT11Q7Z4G4 463 aaKnown RBP5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 DDX53Q86TM3 631 aaKnown RBP5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 CENPLQ8N0S6 344 aaPredicted RBP5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 AHI1Q8N157 1196 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 ZNF786Q8N393 782 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 RASGEF1CQ8N431 466 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 SPATA6LQ8N4H0 392 aa5.69□□□□□ -1.5
LSM1P2-201ENST00000604911 ZNF561Q8N587 486 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms