RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 ZDHHC3Q9NYG2 299 aa11.23□□□□□ -0.61
PDLIM1P1-201ENST00000604187 IL1RAPL1Q9NZN1 696 aa11.23□□□□□ -0.61
PDLIM1P1-201ENST00000604187 UVRAGQ9P2Y5 699 aa11.23□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ZNF282Q9UDV7 671 aaPredicted RBP11.23□□□□□ -0.61
PDLIM1P1-201ENST00000604187 RSPH14Q9UHP6 348 aa11.23□□□□□ -0.61
PDLIM1P1-201ENST00000604187 BZW2Q9Y6E2 419 aaKnown RBP11.23□□□□□ -0.61
PDLIM1P1-201ENST00000604187 FER1L5A0AVI2 2057 aa11.23□□□□□ -0.61
PDLIM1P1-201ENST00000604187 STAB1Q9NY15 2570 aa11.23□□□□□ -0.61
PDLIM1P1-201ENST00000604187 FLNAP21333 2647 aaKnown RBP11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 IGLV3-16A0A075B6K0 115 aa11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 FITM1A5D6W6 292 aa11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 LIN7AO14910 233 aaPredicted RBP11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 MED26O95402 600 aa11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 AP2A1O95782 977 aa11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ITGAMP11215 1152 aa11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 CXCR2P25025 360 aa11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ACADLP28330 430 aa11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 PKLRP30613 574 aa11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 MC4RP32245 332 aa11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 CDKN1CP49918 316 aaPredicted RBP11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ZNF140P52738 457 aaPredicted RBP11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 CACNG1Q06432 222 aa11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ZNF33BQ06732 778 aa11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 OLIG2Q13516 323 aa11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 MESDQ14696 234 aa11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 BRD3Q15059 726 aa11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 LONRF1Q17RB8 773 aa11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 SYTL3Q4VX76 610 aa11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ZC3H12BQ5HYM0 836 aaKnown RBP11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 TCTE1Q5JU00 501 aa11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ABHD17BQ5VST6 288 aa11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 NAPRTQ6XQN6 538 aa11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 Q6ZPB1 254 aaPredicted RBP11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 RBM43Q6ZSC3 357 aaKnown RBP11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 TAX1BP1Q86VP1 789 aa11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 SERPINA9Q86WD7 417 aa11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 SPPL2CQ8IUH8 684 aa11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 C2orf73Q8N5S3 287 aaPredicted RBP11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 THAP3Q8WTV1 239 aaPredicted RBP11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 CA5BP1Q8WTZ4 195 aa11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 GPR137Q96N19 417 aa11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ZNF285Q96NJ3 590 aa11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ZNF304Q9HCX3 659 aa11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 RIC8BQ9NVN3 520 aa11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 LCMT1Q9UIC8 334 aa11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ZNF835Q9Y2P0 537 aa11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 JMJD1CQ15652 2540 aa11.22□□□□□ -0.61
PDLIM1P1-201ENST00000604187 PCM1Q15154 2024 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 IGHV1-45A0A0A0MS14 117 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 NPIPA5E9PKD4 350 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 FFAR3O14843 346 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 GPR42O15529 346 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 KDM1AO60341 852 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 FAM155BO75949 473 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 CRTAMO95727 393 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 SERPING1P05155 500 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 GSTM1P09488 218 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 PRSS56P0CW18 603 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 MYBL2P10244 700 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 FBLP22087 321 aaKnown RBP11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ACRV1P26436 265 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 NR2C2P49116 596 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 VSX2P58304 361 aaPredicted RBP11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 GSTM4Q03013 218 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 FAM214AQ32MH5 1076 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 GPR33Q49SQ1 333 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 FILIP1LQ4L180 1135 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ODF2Q5BJF6 829 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ZNF766Q5HY98 468 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 C3P1Q6ZMU1 363 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 RIPOR1Q6ZS17 1223 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 BZW1Q7L1Q6 419 aaKnown RBP11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 TAS2R42Q7RTR8 314 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 LAPTM4BQ86VI4 370 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 TMEM200AQ86VY9 491 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 AMER2Q8N7J2 671 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 LINC01555Q8NAE3 123 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 AGAP11Q8TF27 550 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 CTNNBL1Q8WYA6 563 aaPredicted RBP11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ELMO1Q92556 727 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 NRGNQ92686 78 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 SDCCAG3Q96C92 435 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 PACSIN1Q9BY11 444 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 LUC7LQ9NQ29 371 aaKnown RBP11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 STOX2Q9P2F5 926 aaPredicted RBP11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 CIDEBQ9UHD4 219 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 NPIPA1Q9UND3 350 aa11.21□□□□□ -0.61
PDLIM1P1-201ENST00000604187 NSD1Q96L73 2696 aaPredicted RBP11.21□□□□□ -0.62
PDLIM1P1-201ENST00000604187 TRBV5-4A0A0C4DH59 114 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 A0A1W2PQ72 361 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 HYKKA2RU49 373 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 FAM221AA4D161 298 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 IDSB3KWA1 339 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 BHMG1C9JSJ3 638 aaPredicted RBP11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 ZNHIT1O43257 154 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 CTSVO60911 334 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 MLYCDO95822 493 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 ABOP16442 354 aa11.2□□□□□ -0.62
PDLIM1P1-201ENST00000604187 KLK2P20151 261 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms