RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 LMO2P25791 158 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 SMSP52788 366 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 GALNT2Q10471 571 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 COLEC12Q5KU26 742 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 RGMBQ6NW40 437 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 TMIEQ8NEW7 156 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 SEC14L1Q92503 715 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 IFT27Q9BW83 186 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 TMEM165Q9HC07 324 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 ZDHHC2Q9UIJ5 367 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 SNX10Q9Y5X0 201 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 ZNF536O15090 1300 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 RNASE12Q5GAN4 147 aaKnown RBP20.62■□□□□ 0.89
SH3D19-211ENST00000604030 FRG2Q64ET8 278 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 FRG2BQ96QU4 278 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 CYP2S1Q96SQ9 504 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 IFT46Q9NQC8 304 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 COMMD3Q9UBI1 195 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 TOR1BO14657 336 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 TYROBPO43914 113 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 INMTO95050 263 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 HLA-DPB1P04440 258 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 MPIP34949 423 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 RPL19P84098 196 aaKnown RBP20.62■□□□□ 0.89
SH3D19-211ENST00000604030 UBXN11Q5T124 520 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 SLC30A6Q6NXT4 461 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 HDAC2Q92769 488 aaKnown RBP20.62■□□□□ 0.89
SH3D19-211ENST00000604030 MSRAQ9UJ68 235 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 FKBP7Q9Y680 259 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 IQCMA0A1B0GVH7 501 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 LCHNA4D1U4 455 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 SOWAHBA6NEL2 793 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 H3BSA7 217 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 ARL6IP5O75915 188 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 H1F0P07305 194 aaKnown RBP20.62■□□□□ 0.89
SH3D19-211ENST00000604030 ZNF630Q2M218 657 aaPredicted RBP20.62■□□□□ 0.89
SH3D19-211ENST00000604030 ZNF404Q494X3 552 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 CMPK2Q5EBM0 449 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 FZD4Q9ULV1 537 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 ATRNL1Q5VV63 1379 aa20.62■□□□□ 0.89
SH3D19-211ENST00000604030 B3GALT2O43825 422 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 PSKH1P11801 424 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 POU2F1P14859 743 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 YAP1P46937 504 aaKnown RBP20.61■□□□□ 0.89
SH3D19-211ENST00000604030 BNIP3Q12983 259 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 COX18Q8N8Q8 333 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 KIAA1191Q96A73 305 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 ZNF358Q9NW07 568 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 FCF1Q9Y324 198 aaKnown RBP20.61■□□□□ 0.89
SH3D19-211ENST00000604030 SLURP2P0DP57 97 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 PHC1P78364 1004 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 ZBTB8BQ8NAP8 495 aaPredicted RBP20.61■□□□□ 0.89
SH3D19-211ENST00000604030 CHST4Q8NCG5 386 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 RBM18Q96H35 190 aaKnown RBP20.61■□□□□ 0.89
SH3D19-211ENST00000604030 FBXL21Q9UKT6 434 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 PDLIM1O00151 329 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 RLN2P04090 185 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 CAP1Q01518 475 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 ILF3Q12906 894 aaKnown RBP eCLIP20.61■□□□□ 0.898e-7■■■□□ 17
SH3D19-211ENST00000604030 PCLAFQ15004 111 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 EIF5AL1Q6IS14 154 aaKnown RBP20.61■□□□□ 0.89
SH3D19-211ENST00000604030 ZMIZ2Q8NF64 920 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 SLC45A3Q96JT2 553 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 HBEGFQ99075 208 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 ARL5AQ9Y689 179 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 TLX3O43711 291 aaPredicted RBP20.61■□□□□ 0.89
SH3D19-211ENST00000604030 HPRP00739 348 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 EBLN1P0CF75 366 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 ENGP17813 658 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 CCL23P55773 120 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 SH3PXD2AQ5TCZ1 1133 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 TPGS2Q68CL5 300 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 SYCE2Q6PIF2 218 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 SLC22A18Q96BI1 424 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 SCGB3A2Q96PL1 93 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 HAS3O00219 553 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 LGR5O75473 907 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 RENP00797 406 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 DLDP09622 509 aaKnown RBP20.61■□□□□ 0.89
SH3D19-211ENST00000604030 DDX6P26196 483 aaKnown RBP eCLIP20.61■□□□□ 0.891e-5■■■□□ 17.8
SH3D19-211ENST00000604030 CARTPTQ16568 116 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 PLA2G4EQ3MJ16 856 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 TRPM4Q8TD43 1214 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 DPF3Q92784 378 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 CEP295NLQ96MC4 621 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 DPAGT1Q9H3H5 408 aa20.61■□□□□ 0.89
SH3D19-211ENST00000604030 NEMP2A6NFY4 417 aa20.6■□□□□ 0.89
SH3D19-211ENST00000604030 MATN4O95460 622 aa20.6■□□□□ 0.89
SH3D19-211ENST00000604030 CSNK2A2P19784 350 aaPredicted RBP20.6■□□□□ 0.89
SH3D19-211ENST00000604030 SP140Q13342 867 aa20.6■□□□□ 0.89
SH3D19-211ENST00000604030 LINGO2Q7L985 606 aa20.6■□□□□ 0.89
SH3D19-211ENST00000604030 LCN9Q8WX39 176 aa20.6■□□□□ 0.89
SH3D19-211ENST00000604030 C12orf43Q96C57 262 aaKnown RBP20.6■□□□□ 0.89
SH3D19-211ENST00000604030 BHLHE41Q9C0J9 482 aaPredicted RBP20.6■□□□□ 0.89
SH3D19-211ENST00000604030 IGFLR1Q9H665 355 aa20.6■□□□□ 0.89
SH3D19-211ENST00000604030 IQCF5A8MTL0 148 aa20.6■□□□□ 0.89
SH3D19-211ENST00000604030 ZNF517Q6ZMY9 492 aaPredicted RBP20.6■□□□□ 0.89
SH3D19-211ENST00000604030 UTS2BQ765I0 119 aa20.6■□□□□ 0.89
SH3D19-211ENST00000604030 PEX13Q92968 403 aa20.6■□□□□ 0.89
SH3D19-211ENST00000604030 RPF2Q9H7B2 306 aaKnown RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms