RNA–Protein interactions for RNA: ENST00000601801.2

NEAT1-203, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 4 BASIC

Gene NEAT1, Length 487 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-203ENST00000601801 CPT1BQ92523 772 aa13.85□□□□□ -0.19
NEAT1-203ENST00000601801 TFGQ92734 400 aaPredicted RBP13.85□□□□□ -0.19
NEAT1-203ENST00000601801 ALKBH8Q96BT7 664 aaKnown RBP13.85□□□□□ -0.19
NEAT1-203ENST00000601801 LRFN5Q96NI6 719 aa13.85□□□□□ -0.19
NEAT1-203ENST00000601801 TFB2MQ9H5Q4 396 aaKnown RBP13.85□□□□□ -0.19
NEAT1-203ENST00000601801 TLK1Q9UKI8 766 aa13.85□□□□□ -0.19
NEAT1-203ENST00000601801 FARSAQ9Y285 508 aaKnown RBP13.85□□□□□ -0.19
NEAT1-203ENST00000601801 RRP15Q9Y3B9 282 aaKnown RBP13.85□□□□□ -0.19
NEAT1-203ENST00000601801 C2orf74A8MZ97 194 aa13.84□□□□□ -0.19
NEAT1-203ENST00000601801 QSOX1O00391 747 aa13.84□□□□□ -0.19
NEAT1-203ENST00000601801 BTN3A1O00481 513 aa13.84□□□□□ -0.19
NEAT1-203ENST00000601801 AP2A2O94973 939 aa13.84□□□□□ -0.19
NEAT1-203ENST00000601801 AP2A1O95782 977 aa13.84□□□□□ -0.19
NEAT1-203ENST00000601801 ZSCAN5DPP0CG00 497 aa13.84□□□□□ -0.19
NEAT1-203ENST00000601801 PRSS56P0CW18 603 aa13.84□□□□□ -0.19
NEAT1-203ENST00000601801 PDHA2P29803 388 aa13.84□□□□□ -0.19
NEAT1-203ENST00000601801 PRDX3P30048 256 aaKnown RBP13.84□□□□□ -0.19
NEAT1-203ENST00000601801 MAGEA6P43360 314 aa13.84□□□□□ -0.19
NEAT1-203ENST00000601801 PREPP48147 710 aa13.84□□□□□ -0.19
NEAT1-203ENST00000601801 GDF10P55107 478 aa13.84□□□□□ -0.19
NEAT1-203ENST00000601801 BASP1P80723 227 aaKnown RBP13.84□□□□□ -0.19
NEAT1-203ENST00000601801 CDK16Q00536 496 aa13.84□□□□□ -0.19
NEAT1-203ENST00000601801 SEMA5AQ13591 1074 aa13.84□□□□□ -0.19
NEAT1-203ENST00000601801 ZNF658BQ4V348 819 aaPredicted RBP13.84□□□□□ -0.19
NEAT1-203ENST00000601801 CCDC38Q502W7 563 aa13.84□□□□□ -0.19
NEAT1-203ENST00000601801 ZNF517Q6ZMY9 492 aaPredicted RBP13.84□□□□□ -0.19
NEAT1-203ENST00000601801 ATCAYQ86WG3 371 aa13.84□□□□□ -0.19
NEAT1-203ENST00000601801 AMIGO1Q86WK6 493 aa13.84□□□□□ -0.19
NEAT1-203ENST00000601801 TAB3Q8N5C8 712 aaPredicted RBP13.84□□□□□ -0.19
NEAT1-203ENST00000601801 SLC38A9Q8NBW4 561 aa13.84□□□□□ -0.19
NEAT1-203ENST00000601801 MCUQ8NE86 351 aa13.84□□□□□ -0.19
NEAT1-203ENST00000601801 OR52E1Q8NGJ3 308 aa13.84□□□□□ -0.19
NEAT1-203ENST00000601801 CLIP3Q96DZ5 547 aa13.84□□□□□ -0.19
NEAT1-203ENST00000601801 SSU72Q9NP77 194 aaKnown RBP13.84□□□□□ -0.19
NEAT1-203ENST00000601801 PIH1D1Q9NWS0 290 aaKnown RBP13.84□□□□□ -0.19
NEAT1-203ENST00000601801 SAMD15Q9P1V8 674 aa13.84□□□□□ -0.19
NEAT1-203ENST00000601801 PSMC3IPQ9P2W1 217 aaPredicted RBP13.84□□□□□ -0.19
NEAT1-203ENST00000601801 PLEKHB1Q9UF11 243 aaPredicted RBP13.84□□□□□ -0.19
NEAT1-203ENST00000601801 PIKFYVEQ9Y2I7 2098 aa13.84□□□□□ -0.19
NEAT1-203ENST00000601801 TMEM150CB9EJG8 249 aa13.83□□□□□ -0.2
NEAT1-203ENST00000601801 K7EM74 188 aa13.83□□□□□ -0.2
NEAT1-203ENST00000601801 MEN1O00255 615 aa13.83□□□□□ -0.2
NEAT1-203ENST00000601801 BTN3A3O00478 584 aa13.83□□□□□ -0.2
NEAT1-203ENST00000601801 LIN7AO14910 233 aaPredicted RBP13.83□□□□□ -0.2
NEAT1-203ENST00000601801 FTH1P02794 183 aa13.83□□□□□ -0.2
NEAT1-203ENST00000601801 MSL3P1P0C860 447 aa13.83□□□□□ -0.2
NEAT1-203ENST00000601801 ETS1P14921 441 aa13.83□□□□□ -0.2
NEAT1-203ENST00000601801 ST6GAL1P15907 406 aa13.83□□□□□ -0.2
NEAT1-203ENST00000601801 CYP2A7P20853 494 aa13.83□□□□□ -0.2
NEAT1-203ENST00000601801 FDFT1P37268 417 aa13.83□□□□□ -0.2
NEAT1-203ENST00000601801 NSG1P42857 185 aa13.83□□□□□ -0.2
NEAT1-203ENST00000601801 ABRQ12979 859 aa13.83□□□□□ -0.2
NEAT1-203ENST00000601801 PRKG2Q13237 762 aa13.83□□□□□ -0.2
NEAT1-203ENST00000601801 BOP1Q14137 746 aaKnown RBP13.83□□□□□ -0.2
NEAT1-203ENST00000601801 ITIH4Q14624 930 aa13.83□□□□□ -0.2
NEAT1-203ENST00000601801 DBN1Q16643 649 aa13.83□□□□□ -0.2
NEAT1-203ENST00000601801 PLEKHS1Q5SXH7 462 aa13.83□□□□□ -0.2
NEAT1-203ENST00000601801 PRAMEF17Q5VTA0 474 aa13.83□□□□□ -0.2
NEAT1-203ENST00000601801 TAX1BP1Q86VP1 789 aa13.83□□□□□ -0.2
NEAT1-203ENST00000601801 PIANPQ8IYJ0 282 aa13.83□□□□□ -0.2
NEAT1-203ENST00000601801 DSELQ8IZU8 1212 aa13.83□□□□□ -0.2
NEAT1-203ENST00000601801 DNAAF3Q8N9W5 541 aa13.83□□□□□ -0.2
NEAT1-203ENST00000601801 GLIS1Q8NBF1 620 aa13.83□□□□□ -0.2
NEAT1-203ENST00000601801 SMC6Q96SB8 1091 aa13.83□□□□□ -0.2
NEAT1-203ENST00000601801 CYTH2Q99418 400 aa13.83□□□□□ -0.2
NEAT1-203ENST00000601801 HGH1Q9BTY7 390 aa13.83□□□□□ -0.2
NEAT1-203ENST00000601801 PITPNM3Q9BZ71 974 aa13.83□□□□□ -0.2
NEAT1-203ENST00000601801 SLC7A5P2Q9GIP4 190 aa13.83□□□□□ -0.2
NEAT1-203ENST00000601801 CHST8Q9H2A9 424 aa13.83□□□□□ -0.2
NEAT1-203ENST00000601801 KCNK9Q9NPC2 374 aa13.83□□□□□ -0.2
NEAT1-203ENST00000601801 SERTAD3Q9UJW9 196 aa13.83□□□□□ -0.2
NEAT1-203ENST00000601801 IKBKGQ9Y6K9 419 aa13.83□□□□□ -0.2
NEAT1-203ENST00000601801 CACNA1DQ01668 2161 aa13.82□□□□□ -0.2
NEAT1-203ENST00000601801 CREBBPQ92793 2442 aa13.82□□□□□ -0.2
NEAT1-203ENST00000601801 TMEM120BA0PK00 339 aa13.82□□□□□ -0.2
NEAT1-203ENST00000601801 CCDC78A2IDD5 438 aa13.82□□□□□ -0.2
NEAT1-203ENST00000601801 MROH6A6NGR9 719 aa13.82□□□□□ -0.2
NEAT1-203ENST00000601801 ENO4A6NNW6 628 aa13.82□□□□□ -0.2
NEAT1-203ENST00000601801 ERI2A8K979 691 aaKnown RBP13.82□□□□□ -0.2
NEAT1-203ENST00000601801 DNAJB5O75953 348 aa13.82□□□□□ -0.2
NEAT1-203ENST00000601801 RAB40ALP0C0E4 278 aa13.82□□□□□ -0.2
NEAT1-203ENST00000601801 STX2P32856 288 aa13.82□□□□□ -0.2
NEAT1-203ENST00000601801 CORO7P57737 925 aa13.82□□□□□ -0.2
NEAT1-203ENST00000601801 CDH17Q12864 832 aa13.82□□□□□ -0.2
NEAT1-203ENST00000601801 IL10RAQ13651 578 aa13.82□□□□□ -0.2
NEAT1-203ENST00000601801 LAMB3Q13751 1172 aa13.82□□□□□ -0.2
NEAT1-203ENST00000601801 LGSNQ5TDP6 509 aa13.82□□□□□ -0.2
NEAT1-203ENST00000601801 PACS1Q6VY07 963 aa13.82□□□□□ -0.2
NEAT1-203ENST00000601801 ADGRF3Q8IZF5 1079 aa13.82□□□□□ -0.2
NEAT1-203ENST00000601801 OTUD6BQ8N6M0 293 aa13.82□□□□□ -0.2
NEAT1-203ENST00000601801 CCDC197Q8NCU1 140 aa13.82□□□□□ -0.2
NEAT1-203ENST00000601801 OR1L3Q8NH93 324 aa13.82□□□□□ -0.2
NEAT1-203ENST00000601801 ELMO1Q92556 727 aa13.82□□□□□ -0.2
NEAT1-203ENST00000601801 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.82□□□□□ -0.26e-54■□□□□ 10.5
NEAT1-203ENST00000601801 CABS1Q96KC9 395 aa13.82□□□□□ -0.2
NEAT1-203ENST00000601801 TTC1Q99614 292 aa13.82□□□□□ -0.2
NEAT1-203ENST00000601801 NLNQ9BYT8 704 aa13.82□□□□□ -0.2
NEAT1-203ENST00000601801 TRIM55Q9BYV6 548 aa13.82□□□□□ -0.2
NEAT1-203ENST00000601801 XKR8Q9H6D3 395 aa13.82□□□□□ -0.2
NEAT1-203ENST00000601801 ACSS3Q9H6R3 686 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms