RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 MENTQ9BUN1 341 aa21.88■■□□□ 1.09
IRF3-228ENST00000601291 CAAP1Q9H8G2 361 aa21.88■■□□□ 1.09
IRF3-228ENST00000601291 ABCF3Q9NUQ8 709 aa21.88■■□□□ 1.09
IRF3-228ENST00000601291 TMEM74BQ9NUR3 256 aa21.88■■□□□ 1.09
IRF3-228ENST00000601291 POT1Q9NUX5 634 aa21.88■■□□□ 1.09
IRF3-228ENST00000601291 TRPS1Q9UHF7 1281 aa21.88■■□□□ 1.09
IRF3-228ENST00000601291 APOBEC2Q9Y235 224 aaKnown RBP21.88■■□□□ 1.09
IRF3-228ENST00000601291 DYRK1BQ9Y463 629 aa21.88■■□□□ 1.09
IRF3-228ENST00000601291 KCNE2Q9Y6J6 123 aa21.88■■□□□ 1.09
IRF3-228ENST00000601291 ZNF195O14628 629 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 HGSO14964 777 aaPredicted RBP21.87■■□□□ 1.09
IRF3-228ENST00000601291 CLGNO14967 610 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 AQP9O43315 295 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 DIAPH2O60879 1101 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 SKAP2O75563 359 aaPredicted RBP21.87■■□□□ 1.09
IRF3-228ENST00000601291 CLDN9O95484 217 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 HGFP14210 728 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 XRCC1P18887 633 aaPredicted RBP21.87■■□□□ 1.09
IRF3-228ENST00000601291 PKLRP30613 574 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 HOXD12P35452 270 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 CTSKP43235 329 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 FASTKQ14296 549 aaKnown RBP21.87■■□□□ 1.09
IRF3-228ENST00000601291 THEMIS2Q5TEJ8 643 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 PEAR1Q5VY43 1037 aaPredicted RBP21.87■■□□□ 1.09
IRF3-228ENST00000601291 LETMD1Q6P1Q0 360 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 MAVSQ7Z434 540 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 CDYL2Q8N8U2 506 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 DCBLD1Q8N8Z6 715 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 ZNF548Q8NEK5 533 aaPredicted RBP21.87■■□□□ 1.09
IRF3-228ENST00000601291 ZDHHC1Q8WTX9 485 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 SMPDL3AQ92484 453 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 KCNA7Q96RP8 456 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 NUF2Q9BZD4 464 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 ZNF225Q9UK10 706 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 BDP1A6H8Y1 2624 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 TRBV23OR9-2A0A075B6M9 112 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 VIPP01282 170 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 EPORP19235 508 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 HMOX2P30519 316 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 SLC19A1P41440 591 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 FOXA1P55317 472 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 KIF19Q2TAC6 998 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 PRAMEF14Q5SWL7 426 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 PRAMEF13Q5VWM6 474 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 EPGNQ6UW88 154 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 MYLK4Q86YV6 388 aaPredicted RBP21.87■■□□□ 1.09
IRF3-228ENST00000601291 OR2L8Q8NGY9 312 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 SETD7Q8WTS6 366 aaKnown RBP21.87■■□□□ 1.09
IRF3-228ENST00000601291 ZFPM2Q8WW38 1151 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 SH3KBP1Q96B97 665 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 RILPQ96NA2 401 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 PCBD2Q9H0N5 130 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 PFDN4Q9NQP4 134 aa21.87■■□□□ 1.09
IRF3-228ENST00000601291 TNRC6BQ9UPQ9 1833 aaKnown RBP21.86■■□□□ 1.09
IRF3-228ENST00000601291 B4DGG1 531 aa21.86■■□□□ 1.09
IRF3-228ENST00000601291 TNFRSF10AO00220 468 aa21.86■■□□□ 1.09
IRF3-228ENST00000601291 UGDHO60701 494 aa21.86■■□□□ 1.09
IRF3-228ENST00000601291 GNAZP19086 355 aa21.86■■□□□ 1.09
IRF3-228ENST00000601291 SHMT2P34897 504 aa21.86■■□□□ 1.09
IRF3-228ENST00000601291 ARRB1P49407 418 aaPredicted RBP21.86■■□□□ 1.09
IRF3-228ENST00000601291 IDH3AP50213 366 aa21.86■■□□□ 1.09
IRF3-228ENST00000601291 GGTA1PQ4G0N0 100 aa21.86■■□□□ 1.09
IRF3-228ENST00000601291 SUSD1Q6UWL2 747 aa21.86■■□□□ 1.09
IRF3-228ENST00000601291 LCTLQ6UWM7 567 aa21.86■■□□□ 1.09
IRF3-228ENST00000601291 PRR23BQ6ZRT6 265 aa21.86■■□□□ 1.09
IRF3-228ENST00000601291 SLC9B2Q86UD5 537 aa21.86■■□□□ 1.09
IRF3-228ENST00000601291 NAGSQ8N159 534 aa21.86■■□□□ 1.09
IRF3-228ENST00000601291 SFRP1Q8N474 314 aa21.86■■□□□ 1.09
IRF3-228ENST00000601291 AVL9Q8NBF6 648 aa21.86■■□□□ 1.09
IRF3-228ENST00000601291 HMGCLL1Q8TB92 370 aa21.86■■□□□ 1.09
IRF3-228ENST00000601291 METTL6Q8TCB7 284 aa21.86■■□□□ 1.09
IRF3-228ENST00000601291 TWIST2Q8WVJ9 160 aa21.86■■□□□ 1.09
IRF3-228ENST00000601291 STON2Q8WXE9 905 aa21.86■■□□□ 1.09
IRF3-228ENST00000601291 OR4K3Q96R72 315 aa21.86■■□□□ 1.09
IRF3-228ENST00000601291 HAUS8Q9BT25 410 aa21.86■■□□□ 1.09
IRF3-228ENST00000601291 CPNE7Q9UBL6 633 aa21.86■■□□□ 1.09
IRF3-228ENST00000601291 DNAJC15Q9Y5T4 150 aa21.86■■□□□ 1.09
IRF3-228ENST00000601291 SNX11Q9Y5W9 270 aa21.86■■□□□ 1.09
IRF3-228ENST00000601291 NCOR1O75376 2440 aa21.86■■□□□ 1.09
IRF3-228ENST00000601291 FAM86C2PA6NEL3 165 aa21.85■■□□□ 1.09
IRF3-228ENST00000601291 PIAS2O75928 621 aa21.85■■□□□ 1.09
IRF3-228ENST00000601291 CAPN1P07384 714 aa21.85■■□□□ 1.09
IRF3-228ENST00000601291 IRF8Q02556 426 aa21.85■■□□□ 1.09
IRF3-228ENST00000601291 BTKQ06187 659 aa21.85■■□□□ 1.09
IRF3-228ENST00000601291 CHIT1Q13231 466 aa21.85■■□□□ 1.09
IRF3-228ENST00000601291 UGT3A2Q3SY77 523 aa21.85■■□□□ 1.09
IRF3-228ENST00000601291 VWA5B1Q5TIE3 1220 aa21.85■■□□□ 1.09
IRF3-228ENST00000601291 ACAD11Q709F0 780 aa21.85■■□□□ 1.09
IRF3-228ENST00000601291 MAPK15Q8TD08 544 aa21.85■■□□□ 1.09
IRF3-228ENST00000601291 SLC37A2Q8TED4 501 aa21.85■■□□□ 1.09
IRF3-228ENST00000601291 LCN9Q8WX39 176 aa21.85■■□□□ 1.09
IRF3-228ENST00000601291 EBF4Q9BQW3 602 aa21.85■■□□□ 1.09
IRF3-228ENST00000601291 SLC29A3Q9BZD2 475 aa21.85■■□□□ 1.09
IRF3-228ENST00000601291 XKR8Q9H6D3 395 aa21.85■■□□□ 1.09
IRF3-228ENST00000601291 SLC40A1Q9NP59 571 aa21.85■■□□□ 1.09
IRF3-228ENST00000601291 ICKQ9UPZ9 632 aa21.85■■□□□ 1.09
IRF3-228ENST00000601291 TIMM22Q9Y584 194 aa21.85■■□□□ 1.09
IRF3-228ENST00000601291 PRAMEF33A0A0G2JMD5 474 aa21.84■■□□□ 1.09
IRF3-228ENST00000601291 E7EQ34 232 aa21.84■■□□□ 1.09
IRF3-228ENST00000601291 LMO7DNF2Z398 122 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms