RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 RD3Q7Z3Z2 195 aa17.12■□□□□ 0.33
SHKBP1-224ENST00000600718 LRRC56Q8IYG6 542 aaPredicted RBP17.12■□□□□ 0.33
SHKBP1-224ENST00000600718 CADM4Q8NFZ8 388 aa17.12■□□□□ 0.33
SHKBP1-224ENST00000600718 OR13H1Q8NG92 308 aa17.12■□□□□ 0.33
SHKBP1-224ENST00000600718 MARK4Q96L34 752 aa17.12■□□□□ 0.33
SHKBP1-224ENST00000600718 OR4K3Q96R72 315 aa17.12■□□□□ 0.33
SHKBP1-224ENST00000600718 FERD3LQ96RJ6 166 aa17.12■□□□□ 0.33
SHKBP1-224ENST00000600718 SPATA7Q9P0W8 599 aa17.12■□□□□ 0.33
SHKBP1-224ENST00000600718 SNX6Q9UNH7 406 aa17.12■□□□□ 0.33
SHKBP1-224ENST00000600718 CFAP20Q9Y6A4 193 aaKnown RBP17.12■□□□□ 0.33
SHKBP1-224ENST00000600718 KCNE1BA0A087WTH5 132 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 ZNF839A8K0R7 811 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 METTL12A8MUP2 240 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 FFAR3O14843 346 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 GPR42O15529 346 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 PI15O43692 258 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 WFS1O76024 890 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 THRAP10827 490 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 CPSF6Q16630 551 aaKnown RBP eCLIP17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 WASH2PQ6VEQ5 465 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 Q6ZSR9 355 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 TRIM46Q7Z4K8 759 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 USP7Q93009 1102 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 MIPEPQ99797 713 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 ORAI3Q9BRQ5 295 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 MVB12BQ9H7P6 319 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 WASH6PQ9NQA3 447 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 TRNAU1APQ9NX07 287 aaKnown RBP17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 ZNF490Q9ULM2 529 aaPredicted RBP17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 DGKBQ9Y6T7 804 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 PDZK1P1A8MUH7 402 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 RGS14O43566 566 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 PRAMEF4O60810 478 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 PEX11AO75192 247 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 TNFP01375 233 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 DCNP07585 359 aaKnown RBP17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 ERGP11308 486 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 COX4I1P13073 169 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 JUPP14923 745 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 NPPBP16860 134 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 GNAZP19086 355 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 CASP2P42575 452 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 TBPL1P62380 186 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 ZXDAP98168 799 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 CTBSQ01459 385 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 PRKG2Q13237 762 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 CLCA4Q14CN2 919 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 HERC3Q15034 1050 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 CYP2A13Q16696 494 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 ALG11Q2TAA5 492 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 XKR6Q5GH73 641 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 PRAMEF9Q5VWM5 478 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 ABRAXAS1Q6UWZ7 409 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 MAMSTRQ6ZN01 415 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 RAB42Q8N4Z0 105 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 OR2T11Q8NH01 316 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 RP9Q8TA86 221 aaKnown RBP17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 SNX19Q92543 992 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 BTBD10Q9BSF8 475 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 CCDC177Q9NQR7 707 aaPredicted RBP17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 DYRK1BQ9Y463 629 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 HEBP2Q9Y5Z4 205 aa17.11■□□□□ 0.33
SHKBP1-224ENST00000600718 B2RBV5 119 aa17.1■□□□□ 0.33
SHKBP1-224ENST00000600718 EZRP15311 586 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-224ENST00000600718 CD27P26842 260 aa17.1■□□□□ 0.33
SHKBP1-224ENST00000600718 HNF4AP41235 474 aa17.1■□□□□ 0.33
SHKBP1-224ENST00000600718 STX1BP61266 288 aa17.1■□□□□ 0.33
SHKBP1-224ENST00000600718 ZNF33BQ06732 778 aa17.1■□□□□ 0.33
SHKBP1-224ENST00000600718 ZRSR2Q15696 482 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-224ENST00000600718 GSTA3Q16772 222 aa17.1■□□□□ 0.33
SHKBP1-224ENST00000600718 ATP6AP1LQ52LC2 224 aa17.1■□□□□ 0.33
SHKBP1-224ENST00000600718 RGL4Q8IZJ4 473 aa17.1■□□□□ 0.33
SHKBP1-224ENST00000600718 SFRP1Q8N474 314 aa17.1■□□□□ 0.33
SHKBP1-224ENST00000600718 PRDM8Q9NQV8 689 aa17.1■□□□□ 0.33
SHKBP1-224ENST00000600718 GPR27Q9NS67 375 aa17.1■□□□□ 0.33
SHKBP1-224ENST00000600718 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.1■□□□□ 0.33
SHKBP1-224ENST00000600718 SERTM1A2A2V5 107 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 E7EQ34 232 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 PSMD12O00232 456 aaPredicted RBP17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 SCAMP1O15126 338 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 MGRN1O60291 552 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 RASGRP1O95267 797 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 ALDOCP09972 364 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 THEGLP0DJG4 465 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 ERVK-8P63133 956 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 DOC2AQ14183 400 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 FASTKQ14296 549 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 KRT33BQ14525 404 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 RPE65Q16518 533 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 SMU1Q2TAY7 513 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 C6orf136Q5SQH8 315 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 SLC36A4Q6YBV0 504 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 RINLQ6ZS11 566 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 DCP2Q8IU60 420 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 HID1Q8IV36 788 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 SLC22A18ASQ8N1D0 253 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 KLHDC7BQ96G42 594 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 PPP3R2Q96LZ3 170 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 CAMK1GQ96NX5 476 aa17.09■□□□□ 0.33
SHKBP1-224ENST00000600718 ELOVL6Q9H5J4 265 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms