RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	ANXA5	P08758	320 aa		21.27	■■□□□ 1
LTBP4-227	ENST00000600026	MYL2	P10916	166 aa		21.27	■■□□□ 1
LTBP4-227	ENST00000600026	AMD1	P17707	334 aa		21.27	■■□□□ 1
LTBP4-227	ENST00000600026	CAPZB	P47756	277 aa		21.27	■■□□□ 1
LTBP4-227	ENST00000600026	KCNC1	P48547	511 aa		21.27	■■□□□ 1
LTBP4-227	ENST00000600026	CFHR1	Q03591	330 aa		21.27	■■□□□ 1
LTBP4-227	ENST00000600026	CCSMST1	Q4G0I0	132 aa		21.27	■■□□□ 1
LTBP4-227	ENST00000600026	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	21.27	■■□□□ 1
LTBP4-227	ENST00000600026	CDKL4	Q5MAI5	379 aa		21.27	■■□□□ 1
LTBP4-227	ENST00000600026	HHAT	Q5VTY9	493 aa		21.27	■■□□□ 1
LTBP4-227	ENST00000600026	USP53	Q70EK8	1073 aa		21.27	■■□□□ 1
LTBP4-227	ENST00000600026	TMPRSS9	Q7Z410	1059 aa		21.27	■■□□□ 1
LTBP4-227	ENST00000600026	CHCHD4	Q8N4Q1	142 aa		21.27	■■□□□ 1
LTBP4-227	ENST00000600026	OR9A1P	Q8NGU1	263 aa		21.27	■■□□□ 1
LTBP4-227	ENST00000600026	CCDC138	Q96M89	665 aa		21.27	■■□□□ 1
LTBP4-227	ENST00000600026	XKR8	Q9H6D3	395 aa		21.27	■■□□□ 1
LTBP4-227	ENST00000600026	CNOT10	Q9H9A5	744 aa	Known RBP	21.27	■■□□□ 1
LTBP4-227	ENST00000600026	CIDEB	Q9UHD4	219 aa		21.27	■■□□□ 1
LTBP4-227	ENST00000600026	KRT87P	A6NCN2	255 aa		21.26	■□□□□ 0.99
LTBP4-227	ENST00000600026	UBXN8	O00124	270 aa		21.26	■□□□□ 0.99
LTBP4-227	ENST00000600026	MT-CO3	P00414	261 aa		21.26	■□□□□ 0.99
LTBP4-227	ENST00000600026	GFAP	P14136	432 aa		21.26	■□□□□ 0.99
LTBP4-227	ENST00000600026	CPA3	P15088	417 aa		21.26	■□□□□ 0.99
LTBP4-227	ENST00000600026	FOXC1	Q12948	553 aa		21.26	■□□□□ 0.99
LTBP4-227	ENST00000600026	SQSTM1	Q13501	440 aa		21.26	■□□□□ 0.99
LTBP4-227	ENST00000600026	MPP2	Q14168	576 aa		21.26	■□□□□ 0.99
LTBP4-227	ENST00000600026	CLPP	Q16740	277 aa	Predicted RBP	21.26	■□□□□ 0.99
LTBP4-227	ENST00000600026	RBM44	Q6ZP01	1051 aa	Known RBP	21.26	■□□□□ 0.99
LTBP4-227	ENST00000600026	TCAIM	Q8N3R3	496 aa		21.26	■□□□□ 0.99
LTBP4-227	ENST00000600026	OR4E2	Q8NGC2	313 aa		21.26	■□□□□ 0.99
LTBP4-227	ENST00000600026	SREK1	Q8WXA9	508 aa	Known RBP	21.26	■□□□□ 0.99
LTBP4-227	ENST00000600026	ATL1	Q8WXF7	558 aa		21.26	■□□□□ 0.99
LTBP4-227	ENST00000600026	NCSTN	Q92542	709 aa		21.26	■□□□□ 0.99
LTBP4-227	ENST00000600026	CCDC126	Q96EE4	140 aa		21.26	■□□□□ 0.99
LTBP4-227	ENST00000600026	LNPEP	Q9UIQ6	1025 aa		21.26	■□□□□ 0.99
LTBP4-227	ENST00000600026	RALY	Q9UKM9	306 aa	Known RBP	21.26	■□□□□ 0.99
LTBP4-227	ENST00000600026	SPTBN2	O15020	2390 aa		21.26	■□□□□ 0.99
LTBP4-227	ENST00000600026	FAM221B	A6H8Z2	402 aa		21.25	■□□□□ 0.99
LTBP4-227	ENST00000600026	OR5K3	A6NET4	321 aa		21.25	■□□□□ 0.99
LTBP4-227	ENST00000600026	NCF1B	A6NI72	391 aa	Predicted RBP	21.25	■□□□□ 0.99
LTBP4-227	ENST00000600026	ZNF839	A8K0R7	811 aa		21.25	■□□□□ 0.99
LTBP4-227	ENST00000600026	NCF1C	A8MVU1	366 aa	Predicted RBP	21.25	■□□□□ 0.99
LTBP4-227	ENST00000600026	TARM1	B6A8C7	271 aa		21.25	■□□□□ 0.99
LTBP4-227	ENST00000600026	MYO1C	O00159	1063 aa		21.25	■□□□□ 0.99
LTBP4-227	ENST00000600026	SBK3	P0C264	359 aa		21.25	■□□□□ 0.99
LTBP4-227	ENST00000600026	NCF1	P14598	390 aa	Predicted RBP	21.25	■□□□□ 0.99
LTBP4-227	ENST00000600026	ATP5F1	P24539	256 aa	Predicted RBP	21.25	■□□□□ 0.99
LTBP4-227	ENST00000600026	PKLR	P30613	574 aa		21.25	■□□□□ 0.99
LTBP4-227	ENST00000600026	SHMT2	P34897	504 aa		21.25	■□□□□ 0.99
LTBP4-227	ENST00000600026	HSD17B2	P37059	387 aa		21.25	■□□□□ 0.99
LTBP4-227	ENST00000600026	PDX1	P52945	283 aa		21.25	■□□□□ 0.99
LTBP4-227	ENST00000600026	ZYG11A	Q6WRX3	759 aa		21.25	■□□□□ 0.99
LTBP4-227	ENST00000600026	AMIGO1	Q86WK6	493 aa		21.25	■□□□□ 0.99
LTBP4-227	ENST00000600026	OOSP2	Q86WS3	158 aa		21.25	■□□□□ 0.99
LTBP4-227	ENST00000600026	SLC22A9	Q8IVM8	553 aa		21.25	■□□□□ 0.99
LTBP4-227	ENST00000600026	FBXO39	Q8N4B4	442 aa		21.25	■□□□□ 0.99
LTBP4-227	ENST00000600026	TMEM151A	Q8N4L1	468 aa		21.25	■□□□□ 0.99
LTBP4-227	ENST00000600026	MGARP	Q8TDB4	240 aa		21.25	■□□□□ 0.99
LTBP4-227	ENST00000600026	DENND1A	Q8TEH3	1009 aa		21.25	■□□□□ 0.99
LTBP4-227	ENST00000600026	PKP4	Q99569	1192 aa		21.25	■□□□□ 0.99
LTBP4-227	ENST00000600026	PAIP2	Q9BPZ3	127 aa	Known RBP	21.25	■□□□□ 0.99
LTBP4-227	ENST00000600026	MENT	Q9BUN1	341 aa		21.25	■□□□□ 0.99
LTBP4-227	ENST00000600026	RAB11FIP5	Q9BXF6	653 aa		21.25	■□□□□ 0.99
LTBP4-227	ENST00000600026	SRMS	Q9H3Y6	488 aa		21.25	■□□□□ 0.99
LTBP4-227	ENST00000600026	TMEM9	Q9P0T7	183 aa		21.25	■□□□□ 0.99
LTBP4-227	ENST00000600026	SPATA7	Q9P0W8	599 aa		21.25	■□□□□ 0.99
LTBP4-227	ENST00000600026	COPG2	Q9UBF2	871 aa		21.25	■□□□□ 0.99
LTBP4-227	ENST00000600026	CLCA2	Q9UQC9	943 aa		21.25	■□□□□ 0.99
LTBP4-227	ENST00000600026	ACACB	O00763	2458 aa		21.24	■□□□□ 0.99
LTBP4-227	ENST00000600026	OR6C74	A6NCV1	312 aa		21.24	■□□□□ 0.99
LTBP4-227	ENST00000600026	BTN3A3	O00478	584 aa		21.24	■□□□□ 0.99
LTBP4-227	ENST00000600026	HOXB3	P14651	431 aa	Predicted RBP	21.24	■□□□□ 0.99
LTBP4-227	ENST00000600026	ETV4	P43268	484 aa		21.24	■□□□□ 0.99
LTBP4-227	ENST00000600026	HNMT	P50135	292 aa		21.24	■□□□□ 0.99
LTBP4-227	ENST00000600026	RAB28	P51157	221 aa		21.24	■□□□□ 0.99
LTBP4-227	ENST00000600026	GFER	P55789	205 aa		21.24	■□□□□ 0.99
LTBP4-227	ENST00000600026	SULT1C3	Q6IMI6	304 aa		21.24	■□□□□ 0.99
LTBP4-227	ENST00000600026	KLHL35	Q6PF15	583 aa		21.24	■□□□□ 0.99
LTBP4-227	ENST00000600026	WDR74	Q6RFH5	385 aa	Predicted RBP	21.24	■□□□□ 0.99
LTBP4-227	ENST00000600026	TMPRSS7	Q7RTY8	843 aa		21.24	■□□□□ 0.99
LTBP4-227	ENST00000600026	TMPRSS12	Q86WS5	348 aa		21.24	■□□□□ 0.99
LTBP4-227	ENST00000600026	PDPR	Q8NCN5	879 aa		21.24	■□□□□ 0.99
LTBP4-227	ENST00000600026	FAM76A	Q8TAV0	307 aa		21.24	■□□□□ 0.99
LTBP4-227	ENST00000600026	FBXL8	Q96CD0	374 aa		21.24	■□□□□ 0.99
LTBP4-227	ENST00000600026	IL17F	Q96PD4	163 aa		21.24	■□□□□ 0.99
LTBP4-227	ENST00000600026	DEPDC7	Q96QD5	511 aa		21.24	■□□□□ 0.99
LTBP4-227	ENST00000600026	MN1	Q10571	1320 aa	Predicted RBP	21.24	■□□□□ 0.99
LTBP4-227	ENST00000600026		G3V2L1	256 aa		21.23	■□□□□ 0.99
LTBP4-227	ENST00000600026	CAPN5	O15484	640 aa	Predicted RBP	21.23	■□□□□ 0.99
LTBP4-227	ENST00000600026	HYAL3	O43820	417 aa	Predicted RBP	21.23	■□□□□ 0.99
LTBP4-227	ENST00000600026	CS	O75390	466 aa	Known RBP	21.23	■□□□□ 0.99
LTBP4-227	ENST00000600026	MTHFD2	P13995	350 aa		21.23	■□□□□ 0.99
LTBP4-227	ENST00000600026	OAS2	P29728	719 aa	Known RBP	21.23	■□□□□ 0.99
LTBP4-227	ENST00000600026	ALDH18A1	P54886	795 aa	Known RBP	21.23	■□□□□ 0.99
LTBP4-227	ENST00000600026	PPP1CA	P62136	330 aa		21.23	■□□□□ 0.99
LTBP4-227	ENST00000600026	ASPH	Q12797	758 aa		21.23	■□□□□ 0.99
LTBP4-227	ENST00000600026	ARHGAP19	Q14CB8	494 aa		21.23	■□□□□ 0.99
LTBP4-227	ENST00000600026	PFKFB4	Q16877	469 aa		21.23	■□□□□ 0.99
LTBP4-227	ENST00000600026	TMEM71	Q6P5X7	295 aa		21.23	■□□□□ 0.99
LTBP4-227	ENST00000600026	ZNF574	Q6ZN55	896 aa	Predicted RBP	21.23	■□□□□ 0.99

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms