RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 GPRC5BQ9NZH0 403 aa14.98□□□□□ -0.01
UPF1-206ENST00000598471 CPNE7Q9UBL6 633 aa14.98□□□□□ -0.01
UPF1-206ENST00000598471 VTI1BQ9UEU0 232 aa14.98□□□□□ -0.01
UPF1-206ENST00000598471 SLC22A14Q9Y267 594 aa14.98□□□□□ -0.01
UPF1-206ENST00000598471 KCNE2Q9Y6J6 123 aa14.98□□□□□ -0.01
UPF1-206ENST00000598471 WDFY4Q6ZS81 3184 aa14.98□□□□□ -0.01
UPF1-206ENST00000598471 TRBV23OR9-2A0A075B6M9 112 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 E7ENX8 843 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 CLGNO14967 610 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 YY2O15391 372 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 SDC3O75056 442 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 ESRRBO95718 433 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 CER1O95813 267 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 CHEK2O96017 543 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 KITP10721 976 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 NBL1P41271 181 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 UBE2IP63279 158 aaKnown RBP14.97□□□□□ -0.01
UPF1-206ENST00000598471 BNC1Q01954 994 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 TAP2Q03519 686 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 PLCL1Q15111 1095 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 LPAL2Q16609 132 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 TRIM61Q5EBN2 209 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 GKAP1Q5VSY0 366 aaPredicted RBP14.97□□□□□ -0.01
UPF1-206ENST00000598471 PRAMEF13Q5VWM6 474 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 SLC23A3Q6PIS1 610 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 EFL1Q7Z2Z2 1120 aaKnown RBP14.97□□□□□ -0.01
UPF1-206ENST00000598471 SPATA21Q7Z572 469 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 MILR1Q7Z6M3 343 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 NAGSQ8N159 534 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 CHCHD4Q8N4Q1 142 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 PPFIBP2Q8ND30 876 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 AGR3Q8TD06 166 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 SLC37A2Q8TED4 501 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 AGAP11Q8TF27 550 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 ZNF473Q8WTR7 871 aaKnown RBP14.97□□□□□ -0.01
UPF1-206ENST00000598471 SETD7Q8WTS6 366 aaKnown RBP14.97□□□□□ -0.01
UPF1-206ENST00000598471 SH3KBP1Q96B97 665 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 IL17FQ96PD4 163 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 ELAC2Q9BQ52 826 aaKnown RBP14.97□□□□□ -0.01
UPF1-206ENST00000598471 HAUS8Q9BT25 410 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 SGPP1Q9BX95 441 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 NUSAP1Q9BXS6 441 aaKnown RBP14.97□□□□□ -0.01
UPF1-206ENST00000598471 CAPN10Q9HC96 672 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 ZBTB26Q9HCK0 441 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 NPHS2Q9NP85 383 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 PNPOQ9NVS9 261 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 KLHL14Q9P2G3 628 aa14.97□□□□□ -0.01
UPF1-206ENST00000598471 MARCOQ9UEW3 520 aaPredicted RBP14.97□□□□□ -0.01
UPF1-206ENST00000598471 A0A1B0GTQ1 180 aa14.96□□□□□ -0.01
UPF1-206ENST00000598471 FAM221BA6H8Z2 402 aa14.96□□□□□ -0.01
UPF1-206ENST00000598471 OR7A17O14581 309 aa14.96□□□□□ -0.01
UPF1-206ENST00000598471 HGSO14964 777 aaPredicted RBP14.96□□□□□ -0.01
UPF1-206ENST00000598471 AZIN1O14977 448 aa14.96□□□□□ -0.01
UPF1-206ENST00000598471 RRP9O43818 475 aaKnown RBP14.96□□□□□ -0.01
UPF1-206ENST00000598471 ENO1P06733 434 aaKnown RBP14.96□□□□□ -0.01
UPF1-206ENST00000598471 EBLN1P0CF75 366 aa14.96□□□□□ -0.01
UPF1-206ENST00000598471 ALPPL2P10696 532 aa14.96□□□□□ -0.01
UPF1-206ENST00000598471 EPHA8P29322 1005 aaPredicted RBP14.96□□□□□ -0.01
UPF1-206ENST00000598471 MPLP40238 635 aa14.96□□□□□ -0.01
UPF1-206ENST00000598471 CCT8P50990 548 aa14.96□□□□□ -0.01
UPF1-206ENST00000598471 SH3BP2P78314 561 aa14.96□□□□□ -0.01
UPF1-206ENST00000598471 HHEXQ03014 270 aa14.96□□□□□ -0.01
UPF1-206ENST00000598471 DEFB133Q30KQ1 61 aa14.96□□□□□ -0.01
UPF1-206ENST00000598471 AMIGO1Q86WK6 493 aa14.96□□□□□ -0.01
UPF1-206ENST00000598471 CLYBLQ8N0X4 340 aa14.96□□□□□ -0.01
UPF1-206ENST00000598471 NTMT1Q9BV86 223 aa14.96□□□□□ -0.01
UPF1-206ENST00000598471 CAAP1Q9H8G2 361 aa14.96□□□□□ -0.01
UPF1-206ENST00000598471 ACTR8Q9H981 624 aa14.96□□□□□ -0.01
UPF1-206ENST00000598471 SLC40A1Q9NP59 571 aa14.96□□□□□ -0.01
UPF1-206ENST00000598471 PFDN4Q9NQP4 134 aa14.96□□□□□ -0.01
UPF1-206ENST00000598471 ABCF3Q9NUQ8 709 aa14.96□□□□□ -0.01
UPF1-206ENST00000598471 INTS7Q9NVH2 962 aaKnown RBP14.96□□□□□ -0.01
UPF1-206ENST00000598471 OR6C2Q9NZP2 312 aa14.96□□□□□ -0.01
UPF1-206ENST00000598471 TRPS1Q9UHF7 1281 aa14.96□□□□□ -0.01
UPF1-206ENST00000598471 ZDHHC2Q9UIJ5 367 aa14.96□□□□□ -0.01
UPF1-206ENST00000598471 ICKQ9UPZ9 632 aa14.96□□□□□ -0.01
UPF1-206ENST00000598471 TRAF6Q9Y4K3 522 aa14.96□□□□□ -0.01
UPF1-206ENST00000598471 GON4LQ3T8J9 2241 aa14.95□□□□□ -0.02
UPF1-206ENST00000598471 TRPC5OSA6NMA1 111 aa14.95□□□□□ -0.02
UPF1-206ENST00000598471 ARHGAP33O14559 1287 aa14.95□□□□□ -0.02
UPF1-206ENST00000598471 UBFD1O14562 309 aaKnown RBP14.95□□□□□ -0.02
UPF1-206ENST00000598471 HDAC3O15379 428 aa14.95□□□□□ -0.02
UPF1-206ENST00000598471 SNX3O60493 162 aa14.95□□□□□ -0.02
UPF1-206ENST00000598471 UGDHO60701 494 aa14.95□□□□□ -0.02
UPF1-206ENST00000598471 CCNDBP1O95273 360 aa14.95□□□□□ -0.02
UPF1-206ENST00000598471 CLDN9O95484 217 aa14.95□□□□□ -0.02
UPF1-206ENST00000598471 FGF4P08620 206 aa14.95□□□□□ -0.02
UPF1-206ENST00000598471 UROSP10746 265 aa14.95□□□□□ -0.02
UPF1-206ENST00000598471 GNAZP19086 355 aa14.95□□□□□ -0.02
UPF1-206ENST00000598471 HMOX2P30519 316 aa14.95□□□□□ -0.02
UPF1-206ENST00000598471 IRF8Q02556 426 aa14.95□□□□□ -0.02
UPF1-206ENST00000598471 TRAF3Q13114 568 aa14.95□□□□□ -0.02
UPF1-206ENST00000598471 FASTKQ14296 549 aaKnown RBP14.95□□□□□ -0.02
UPF1-206ENST00000598471 GPR18Q14330 331 aa14.95□□□□□ -0.02
UPF1-206ENST00000598471 TERF2Q15554 542 aa14.95□□□□□ -0.02
UPF1-206ENST00000598471 ZXDCQ2QGD7 858 aaPredicted RBP14.95□□□□□ -0.02
UPF1-206ENST00000598471 HLA-BQ31612 363 aa14.95□□□□□ -0.02
UPF1-206ENST00000598471 LAIR1Q6GTX8 287 aa14.95□□□□□ -0.02
UPF1-206ENST00000598471 CGB2Q6NT52 195 aa14.95□□□□□ -0.02
UPF1-206ENST00000598471 LCTLQ6UWM7 567 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms