RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 GGTA1PQ4G0N0 100 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 DNAJC14Q6Y2X3 702 aaPredicted RBP12.92□□□□□ -0.34
VRK3-209ENST00000594948 ZNF783Q6ZMS7 281 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 ARMC8Q8IUR7 673 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 TTC29Q8NA56 475 aaPredicted RBP12.92□□□□□ -0.34
VRK3-209ENST00000594948 GPR152Q8TDT2 470 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 C2orf15Q8WU43 125 aaKnown RBP12.92□□□□□ -0.34
VRK3-209ENST00000594948 PLD4Q96BZ4 506 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 LGALS12Q96DT0 336 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 EGFL8Q99944 293 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 CIPCQ9C0C6 399 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 MMP27Q9H306 513 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 DSN1Q9H410 356 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 RIBC2Q9H4K1 309 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 PARVBQ9HBI1 364 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 ZFP14Q9HCL3 533 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 LATS2Q9NRM7 1088 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 EXD2Q9NVH0 621 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 KLHL42Q9P2K6 505 aa12.92□□□□□ -0.34
VRK3-209ENST00000594948 PIKFYVEQ9Y2I7 2098 aa12.91□□□□□ -0.34
VRK3-209ENST00000594948 TRBV5-4A0A0C4DH59 114 aa12.91□□□□□ -0.34
VRK3-209ENST00000594948 A0A1B0GVM2 712 aa12.91□□□□□ -0.34
VRK3-209ENST00000594948 MTMR11A4FU01 709 aa12.91□□□□□ -0.34
VRK3-209ENST00000594948 EVPLLA8MZ36 301 aa12.91□□□□□ -0.34
VRK3-209ENST00000594948 LOC730098B7Z3J9 87 aa12.91□□□□□ -0.34
VRK3-209ENST00000594948 H0Y626 953 aa12.91□□□□□ -0.34
VRK3-209ENST00000594948 TRIM16O95361 564 aa12.91□□□□□ -0.34
VRK3-209ENST00000594948 CLDN9O95484 217 aa12.91□□□□□ -0.34
VRK3-209ENST00000594948 PSMB9P28065 219 aa12.91□□□□□ -0.34
VRK3-209ENST00000594948 ATP5C1P36542 298 aaKnown RBP12.91□□□□□ -0.34
VRK3-209ENST00000594948 EIF2DP41214 584 aaKnown RBP12.91□□□□□ -0.34
VRK3-209ENST00000594948 OR1G1P47890 313 aa12.91□□□□□ -0.34
VRK3-209ENST00000594948 VBP1P61758 197 aa12.91□□□□□ -0.34
VRK3-209ENST00000594948 PPP1R8Q12972 351 aaKnown RBP12.91□□□□□ -0.34
VRK3-209ENST00000594948 PROX2Q3B8N5 592 aa12.91□□□□□ -0.34
VRK3-209ENST00000594948 INO80DQ53TQ3 878 aaPredicted RBP12.91□□□□□ -0.34
VRK3-209ENST00000594948 KIAA1614Q5VZ46 1190 aa12.91□□□□□ -0.34
VRK3-209ENST00000594948 LAIR1Q6GTX8 287 aa12.91□□□□□ -0.34
VRK3-209ENST00000594948 TMEM53Q6P2H8 277 aa12.91□□□□□ -0.34
VRK3-209ENST00000594948 MACC1Q6ZN28 852 aa12.91□□□□□ -0.34
VRK3-209ENST00000594948 SERPINA9Q86WD7 417 aa12.91□□□□□ -0.34
VRK3-209ENST00000594948 ZBTB2Q8N680 514 aa12.91□□□□□ -0.34
VRK3-209ENST00000594948 BEND7Q8N7W2 519 aaPredicted RBP12.91□□□□□ -0.34
VRK3-209ENST00000594948 ZNF540Q8NDQ6 660 aa12.91□□□□□ -0.34
VRK3-209ENST00000594948 SLC38A4Q969I6 547 aa12.91□□□□□ -0.34
VRK3-209ENST00000594948 ULK4Q96C45 1275 aa12.91□□□□□ -0.34
VRK3-209ENST00000594948 SLC6A13Q9NSD5 602 aa12.91□□□□□ -0.34
VRK3-209ENST00000594948 FARSBQ9NSD9 589 aaKnown RBP12.91□□□□□ -0.34
VRK3-209ENST00000594948 PLXNB3Q9ULL4 1909 aa12.91□□□□□ -0.34
VRK3-209ENST00000594948 FFAR3O14843 346 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 GPR42O15529 346 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 GUCA1CO95843 209 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 FABP3P05413 133 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 CBSLP0DN79 551 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 CBSP35520 551 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 GGT5P36269 586 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 PPP3CCP48454 512 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 ARF5P84085 180 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 MTAPQ13126 283 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 GPR17Q13304 367 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 BOP1Q14137 746 aaKnown RBP12.9□□□□□ -0.34
VRK3-209ENST00000594948 GPRC6AQ5T6X5 926 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 MLIPQ5VWP3 458 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 C9orf131Q5VYM1 1079 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 FAHD1Q6P587 224 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 CEP68Q76N32 757 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 PLD3Q8IV08 490 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 TRPV1Q8NER1 839 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 CHAC2Q8WUX2 184 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 OVCA2Q8WZ82 227 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 CMTM7Q96FZ5 175 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 TXNDC15Q96J42 360 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 SPATA9Q9BWV2 254 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 ITPAQ9BY32 194 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 GPR63Q9BZJ6 419 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 PLCXD1Q9NUJ7 323 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 LHX3Q9UBR4 397 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 U3KQV3 271 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 MN1Q10571 1320 aaPredicted RBP12.9□□□□□ -0.34
VRK3-209ENST00000594948 SLC38A8A6NNN8 435 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 ARVCFO00192 962 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 EIF3FO00303 357 aaPredicted RBP12.9□□□□□ -0.34
VRK3-209ENST00000594948 PRMT3O60678 531 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 STK16O75716 305 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 UPK1BO75841 260 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 CD160O95971 181 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 GSNP06396 782 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 ITGALP20701 1170 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 SERPINB1P30740 379 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 HOXA9P31269 272 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 ITGA1P56199 1179 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 NCS1P62166 190 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 RPS24P62847 133 aaKnown RBP12.9□□□□□ -0.34
VRK3-209ENST00000594948 FAM189BP81408 668 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 TEKQ02763 1124 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 SIM2Q14190 667 aaPredicted RBP12.9□□□□□ -0.34
VRK3-209ENST00000594948 PHKG1Q16816 387 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 TRIM71Q2Q1W2 868 aaKnown RBP12.9□□□□□ -0.34
VRK3-209ENST00000594948 CLLU1OSQ5K130 101 aa12.9□□□□□ -0.34
VRK3-209ENST00000594948 TMEM236Q5W0B7 351 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms