RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 NOMO1Q15155 1222 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 TBCEQ15813 527 aaPredicted RBP4.28□□□□□ -1.72
LRIT3-202ENST00000594814 MICAQ29983 383 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 UGT3A2Q3SY77 523 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 LBHQ53QV2 105 aaPredicted RBP4.28□□□□□ -1.72
LRIT3-202ENST00000594814 EXOSC6Q5RKV6 272 aaKnown RBP4.28□□□□□ -1.72
LRIT3-202ENST00000594814 UBXN11Q5T124 520 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 ZNF691Q5VV52 312 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 KDM4DQ6B0I6 523 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 REP15Q6BDI9 236 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 DARS2Q6PI48 645 aaKnown RBP4.28□□□□□ -1.72
LRIT3-202ENST00000594814 CYP20A1Q6UW02 462 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 IL27RAQ6UWB1 636 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 C17orf99Q6UX52 265 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 GDPD3Q7L5L3 318 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 LHFPL3Q86UP9 236 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 TRIM69Q86WT6 500 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 RNF130Q86XS8 419 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 BBS7Q8IWZ6 715 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 CMTR2Q8IYT2 770 aaKnown RBP4.28□□□□□ -1.72
LRIT3-202ENST00000594814 STPG2Q8N412 459 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 BPIFB6Q8NFQ5 453 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 SLC20A1Q8WUM9 679 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 DEPDC1BQ8WUY9 529 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 TRAPPC12Q8WVT3 735 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 CYGBQ8WWM9 190 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 ASB13Q8WXK3 278 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 KAT5Q92993 513 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 CREB3L1Q96BA8 519 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 PPP1R2P1Q96PQ5 205 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 DCLRE1CQ96SD1 692 aaKnown RBP4.28□□□□□ -1.72
LRIT3-202ENST00000594814 RAD9AQ99638 391 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 ZNF577Q9BSK1 485 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 MENTQ9BUN1 341 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 ITPAQ9BY32 194 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 CXCL16Q9H2A7 254 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 PIGUQ9H490 435 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 FAM83DQ9H4H8 585 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 MCUBQ9NWR8 336 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 FAM8A1Q9UBU6 413 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 TJP2Q9UDY2 1190 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 ING4Q9UNL4 249 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 SNX8Q9Y5X2 465 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 CCDC182A6NF36 153 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 STX16-NPEPL1H3BU86 382 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 AP3D1O14617 1153 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 CD3EAPO15446 510 aaKnown RBP4.28□□□□□ -1.72
LRIT3-202ENST00000594814 PCDHGA12O60330 932 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 NRP2O60462 931 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 RAD1O60671 282 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 SLC43A1O75387 559 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 SLC10A3P09131 477 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 INSRRP14616 1297 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 CTPS1P17812 591 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 ADCYAP1R1P41586 468 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 PXNP49023 591 aaPredicted RBP4.28□□□□□ -1.72
LRIT3-202ENST00000594814 GDI2P50395 445 aaKnown RBP4.28□□□□□ -1.72
LRIT3-202ENST00000594814 CSRP3P50461 194 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 RAB13P51153 203 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 ARSFP54793 590 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 MLLT10P55197 1068 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 CD300CQ08708 224 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 POLD3Q15054 466 aaPredicted RBP4.28□□□□□ -1.72
LRIT3-202ENST00000594814 MAJINQ3KP22 176 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 MDH1BQ5I0G3 518 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 RGMBQ6NW40 437 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 ATG14Q6ZNE5 492 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 DDX53Q86TM3 631 aaKnown RBP4.28□□□□□ -1.72
LRIT3-202ENST00000594814 HIPK1Q86Z02 1210 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 CPNE9Q8IYJ1 553 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 ABRAQ8N0Z2 381 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 EMC1Q8N766 993 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 CHDHQ8NE62 594 aaPredicted RBP4.28□□□□□ -1.72
LRIT3-202ENST00000594814 FBXL13Q8NEE6 735 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 PSMA8Q8TAA3 256 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 FAR1Q8WVX9 515 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 DEDD2Q8WXF8 326 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 SNAPC3Q92966 411 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 WNT8BQ93098 351 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 KIAA1191Q96A73 305 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 C7orf34Q96L11 122 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 NSMCE2Q96MF7 247 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 KCTD15Q96SI1 283 aaPredicted RBP4.28□□□□□ -1.72
LRIT3-202ENST00000594814 TBCBQ99426 244 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 AGAP2Q99490 1192 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 CINPQ9BW66 212 aaPredicted RBP4.28□□□□□ -1.72
LRIT3-202ENST00000594814 SPATA9Q9BWV2 254 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 POFUT1Q9H488 388 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 TAS2R3Q9NYW6 316 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 ADA2Q9NZK5 511 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 OPTCQ9UBM4 332 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 EIF2B4Q9UI10 523 aaKnown RBP4.28□□□□□ -1.72
LRIT3-202ENST00000594814 ADAM30Q9UKF2 790 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 INTS6Q9UL03 887 aaKnown RBP4.28□□□□□ -1.72
LRIT3-202ENST00000594814 EMCNQ9ULC0 261 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 PCDHGA9Q9Y5G4 932 aaKnown RBP4.28□□□□□ -1.72
LRIT3-202ENST00000594814 PCDHGA8Q9Y5G5 932 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 PCDHGA6Q9Y5G7 932 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 CCDC78A2IDD5 438 aa4.28□□□□□ -1.72
LRIT3-202ENST00000594814 MEIOCA2RUB1 952 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms