RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 LINC00597Q9H2U6 94 aa16.13■□□□□ 0.17
PRKCSH-217ENST00000592741 CARS2Q9HA77 564 aaKnown RBP16.13■□□□□ 0.17
PRKCSH-217ENST00000592741 PCDH12Q9NPG4 1184 aa16.13■□□□□ 0.17
PRKCSH-217ENST00000592741 DNAJB9Q9UBS3 223 aa16.13■□□□□ 0.17
PRKCSH-217ENST00000592741 PLXNA2O75051 1894 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 TSPAN11A1L157 253 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 JUPP14923 745 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 XPAP23025 273 aaPredicted RBP16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 MAP4P27816 1152 aaKnown RBP16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 ETV3P41162 512 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 ERVFC1P60507 584 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 PHC1P78364 1004 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 CHIT1Q13231 466 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 ZNF77Q15935 545 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 PGS1Q32NB8 556 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 ARSIQ5FYB1 569 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 MSANTD1Q6ZTZ1 278 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 Q6ZVL8 140 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 CYP2U1Q7Z449 544 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 STK32CQ86UX6 486 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 PHACTR4Q8IZ21 702 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 FAM86B1Q8N7N1 296 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 ADAMTS16Q8TE57 1224 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 CYB5D2Q8WUJ1 264 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 MYLIPQ8WY64 445 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 POP5Q969H6 163 aaKnown RBP16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 APIPQ96GX9 242 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 ZSCAN5AQ9BUG6 496 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 ATG10Q9H0Y0 220 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 SOX17Q9H6I2 414 aaPredicted RBP16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 SERHLQ9NQF3 203 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 NFKBIL1Q9UBC1 381 aaPredicted RBP16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 IRAK3Q9Y616 596 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 HIDE1A8MVS5 230 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 TTC34A8MYJ7 566 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 SGTAO43765 313 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 RFPL2O75678 378 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 RETP07949 1114 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 RHOP08100 348 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 GSTM1P09488 218 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 THRBP10828 461 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 TIMP2P16035 220 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 AMD1P17707 334 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 SLC5A2P31639 672 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 HTRA4P83105 476 aaPredicted RBP16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 GSTM4Q03013 218 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 ZNF284Q2VY69 593 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 SYTL3Q4VX76 610 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 TMEM215Q68D42 235 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 KIAA0907Q7Z7F0 614 aaPredicted RBP16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 GPR149Q86SP6 731 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 CALHM3Q86XJ0 350 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 ZDHHC13Q8IUH4 622 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 CSGALNACT1Q8TDX6 532 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 FRS2Q8WU20 508 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 CLP1Q92989 425 aaKnown RBP16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 HIC2Q96JB3 615 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 APOLD1Q96LR9 279 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 RIOK2Q9BVS4 552 aaKnown RBP16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 C11orf49Q9H6J7 331 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 SLC6A13Q9NSD5 602 aa16.12■□□□□ 0.17
PRKCSH-217ENST00000592741 G3V2T6 193 aa16.11■□□□□ 0.17
PRKCSH-217ENST00000592741 CLGNO14967 610 aa16.11■□□□□ 0.17
PRKCSH-217ENST00000592741 KIAA0355O15063 1070 aa16.11■□□□□ 0.17
PRKCSH-217ENST00000592741 UGDHO60701 494 aa16.11■□□□□ 0.17
PRKCSH-217ENST00000592741 CREG1O75629 220 aa16.11■□□□□ 0.17
PRKCSH-217ENST00000592741 TRMUO75648 421 aaKnown RBP16.11■□□□□ 0.17
PRKCSH-217ENST00000592741 SLCO2B1O94956 709 aa16.11■□□□□ 0.17
PRKCSH-217ENST00000592741 CST1P01037 141 aa16.11■□□□□ 0.17
PRKCSH-217ENST00000592741 ASLP04424 464 aa16.11■□□□□ 0.17
PRKCSH-217ENST00000592741 ALPLP05186 524 aa16.11■□□□□ 0.17
PRKCSH-217ENST00000592741 TACR1P25103 407 aa16.11■□□□□ 0.17
PRKCSH-217ENST00000592741 PFN3P60673 137 aa16.11■□□□□ 0.17
PRKCSH-217ENST00000592741 HTRA3P83110 453 aa16.11■□□□□ 0.17
PRKCSH-217ENST00000592741 IRF8Q02556 426 aa16.11■□□□□ 0.17
PRKCSH-217ENST00000592741 ZNF33BQ06732 778 aa16.11■□□□□ 0.17
PRKCSH-217ENST00000592741 HENMT1Q5T8I9 393 aaKnown RBP16.11■□□□□ 0.17
PRKCSH-217ENST00000592741 LIPJQ5W064 366 aa16.11■□□□□ 0.17
PRKCSH-217ENST00000592741 GPR180Q86V85 440 aa16.11■□□□□ 0.17
PRKCSH-217ENST00000592741 RAVER1Q8IY67 606 aaKnown RBP16.11■□□□□ 0.17
PRKCSH-217ENST00000592741 NAT16Q8N8M0 369 aa16.11■□□□□ 0.17
PRKCSH-217ENST00000592741 NELL1Q92832 810 aa16.11■□□□□ 0.17
PRKCSH-217ENST00000592741 MRGPRX3Q96LB0 322 aa16.11■□□□□ 0.17
PRKCSH-217ENST00000592741 RDH12Q96NR8 316 aa16.11■□□□□ 0.17
PRKCSH-217ENST00000592741 INPP5KQ9BT40 448 aa16.11■□□□□ 0.17
PRKCSH-217ENST00000592741 MAGIXQ9H6Y5 334 aa16.11■□□□□ 0.17
PRKCSH-217ENST00000592741 DCAF13Q9NV06 445 aaKnown RBP16.11■□□□□ 0.17
PRKCSH-217ENST00000592741 PCDH10Q9P2E7 1040 aa16.11■□□□□ 0.17
PRKCSH-217ENST00000592741 IL36AQ9UHA7 158 aa16.11■□□□□ 0.17
PRKCSH-217ENST00000592741 PPT2Q9UMR5 302 aa16.11■□□□□ 0.17
PRKCSH-217ENST00000592741 KRT87PA6NCN2 255 aa16.1■□□□□ 0.17
PRKCSH-217ENST00000592741 OR2AG2A6NM03 316 aa16.1■□□□□ 0.17
PRKCSH-217ENST00000592741 GNGT2O14610 69 aa16.1■□□□□ 0.17
PRKCSH-217ENST00000592741 WNT9AO14904 365 aa16.1■□□□□ 0.17
PRKCSH-217ENST00000592741 PRAMEF4O60810 478 aa16.1■□□□□ 0.17
PRKCSH-217ENST00000592741 PRKD3O94806 890 aa16.1■□□□□ 0.17
PRKCSH-217ENST00000592741 HOXB6P17509 224 aaKnown RBP16.1■□□□□ 0.17
PRKCSH-217ENST00000592741 HNRNPFP52597 415 aaKnown RBP16.1■□□□□ 0.17
PRKCSH-217ENST00000592741 CSTF3Q12996 717 aaKnown RBP16.1■□□□□ 0.17
PRKCSH-217ENST00000592741 PON2Q15165 354 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms