RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 COG1Q8WTW3 980 aa18.12■□□□□ 0.49
CCDC43-205ENST00000592333 P2RY12Q9H244 342 aa18.12■□□□□ 0.49
CCDC43-205ENST00000592333 ZNF552Q9H707 407 aaPredicted RBP18.12■□□□□ 0.49
CCDC43-205ENST00000592333 CHRAC1Q9NRG0 131 aa18.12■□□□□ 0.49
CCDC43-205ENST00000592333 TREX1Q9NSU2 369 aa18.12■□□□□ 0.49
CCDC43-205ENST00000592333 BFARQ9NZS9 450 aa18.12■□□□□ 0.49
CCDC43-205ENST00000592333 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.12■□□□□ 0.49
CCDC43-205ENST00000592333 SLC39A10Q9ULF5 831 aa18.12■□□□□ 0.49
CCDC43-205ENST00000592333 PLAGL1Q9UM63 463 aa18.12■□□□□ 0.49
CCDC43-205ENST00000592333 SPTAN1Q13813 2472 aaKnown RBP18.12■□□□□ 0.49
CCDC43-205ENST00000592333 A0A0U1RQJ8 604 aa18.11■□□□□ 0.49
CCDC43-205ENST00000592333 FITM1A5D6W6 292 aa18.11■□□□□ 0.49
CCDC43-205ENST00000592333 DSCR3O14972 297 aa18.11■□□□□ 0.49
CCDC43-205ENST00000592333 PRICKLE3O43900 615 aaPredicted RBP18.11■□□□□ 0.49
CCDC43-205ENST00000592333 UMODP07911 640 aa18.11■□□□□ 0.49
CCDC43-205ENST00000592333 ADARP55265 1226 aaKnown RBP18.11■□□□□ 0.49
CCDC43-205ENST00000592333 RPS6KA1Q15418 735 aa18.11■□□□□ 0.49
CCDC43-205ENST00000592333 SF1Q15637 639 aaKnown RBP18.11■□□□□ 0.49
CCDC43-205ENST00000592333 PTRHD1Q6GMV3 140 aaKnown RBP18.11■□□□□ 0.49
CCDC43-205ENST00000592333 FIGLAQ6QHK4 219 aa18.11■□□□□ 0.49
CCDC43-205ENST00000592333 ZNF662Q6ZS27 426 aa18.11■□□□□ 0.49
CCDC43-205ENST00000592333 LMNTD1Q8N9Z9 388 aa18.11■□□□□ 0.49
CCDC43-205ENST00000592333 C1orf54Q8WWF1 131 aa18.11■□□□□ 0.49
CCDC43-205ENST00000592333 FOPNLQ96NB1 174 aa18.11■□□□□ 0.49
CCDC43-205ENST00000592333 TCF12Q99081 682 aa18.11■□□□□ 0.49
CCDC43-205ENST00000592333 HOMER3Q9NSC5 361 aa18.11■□□□□ 0.49
CCDC43-205ENST00000592333 FER1L5A0AVI2 2057 aa18.11■□□□□ 0.49
CCDC43-205ENST00000592333 SHANK1Q9Y566 2161 aa18.1■□□□□ 0.49
CCDC43-205ENST00000592333 TCP11X1B4DZS4 312 aa18.1■□□□□ 0.49
CCDC43-205ENST00000592333 H3BMM5 538 aa18.1■□□□□ 0.49
CCDC43-205ENST00000592333 CNOT3O75175 753 aaKnown RBP18.1■□□□□ 0.49
CCDC43-205ENST00000592333 ALAS2P22557 587 aa18.1■□□□□ 0.49
CCDC43-205ENST00000592333 ATP5DP30049 168 aa18.1■□□□□ 0.49
CCDC43-205ENST00000592333 RPL22P35268 128 aaKnown RBP18.1■□□□□ 0.49
CCDC43-205ENST00000592333 CSE1LP55060 971 aaKnown RBP18.1■□□□□ 0.49
CCDC43-205ENST00000592333 RNF187Q5TA31 235 aaPredicted RBP18.1■□□□□ 0.49
CCDC43-205ENST00000592333 MRNIPQ6NTE8 343 aa18.1■□□□□ 0.49
CCDC43-205ENST00000592333 TTLL10Q6ZVT0 673 aa18.1■□□□□ 0.49
CCDC43-205ENST00000592333 OTOAQ7RTW8 1153 aa18.1■□□□□ 0.49
CCDC43-205ENST00000592333 PPP1R32Q7Z5V6 425 aa18.1■□□□□ 0.49
CCDC43-205ENST00000592333 SDCCAG8Q86SQ7 713 aaPredicted RBP18.1■□□□□ 0.49
CCDC43-205ENST00000592333 ZADH2Q8N4Q0 377 aa18.1■□□□□ 0.49
CCDC43-205ENST00000592333 TTC29Q8NA56 475 aaPredicted RBP18.1■□□□□ 0.49
CCDC43-205ENST00000592333 KIFC1Q9BW19 673 aa18.1■□□□□ 0.49
CCDC43-205ENST00000592333 SLC22A11Q9NSA0 550 aa18.1■□□□□ 0.49
CCDC43-205ENST00000592333 GUCA1BQ9UMX6 200 aa18.1■□□□□ 0.49
CCDC43-205ENST00000592333 SPTBN1Q01082 2364 aaKnown RBP18.1■□□□□ 0.49
CCDC43-205ENST00000592333 PCSK5Q92824 1860 aa18.09■□□□□ 0.49
CCDC43-205ENST00000592333 IQCF5A8MTL0 148 aa18.09■□□□□ 0.49
CCDC43-205ENST00000592333 NDUFS3O75489 264 aa18.09■□□□□ 0.49
CCDC43-205ENST00000592333 ETS1P14921 441 aa18.09■□□□□ 0.49
CCDC43-205ENST00000592333 ITGAXP20702 1163 aa18.09■□□□□ 0.49
CCDC43-205ENST00000592333 SNX1Q13596 522 aa18.09■□□□□ 0.49
CCDC43-205ENST00000592333 ESPL1Q14674 2120 aa18.09■□□□□ 0.49
CCDC43-205ENST00000592333 SIX1Q15475 284 aaPredicted RBP18.09■□□□□ 0.49
CCDC43-205ENST00000592333 PLEKHN1Q494U1 663 aaPredicted RBP18.09■□□□□ 0.49
CCDC43-205ENST00000592333 FCRL6Q6DN72 434 aa18.09■□□□□ 0.49
CCDC43-205ENST00000592333 CFAP61Q8NHU2 1237 aa18.09■□□□□ 0.49
CCDC43-205ENST00000592333 LKAAEAR1Q8TD35 194 aa18.09■□□□□ 0.49
CCDC43-205ENST00000592333 MFRPQ9BY79 579 aa18.09■□□□□ 0.49
CCDC43-205ENST00000592333 CUTCQ9NTM9 273 aa18.09■□□□□ 0.49
CCDC43-205ENST00000592333 SPATA7Q9P0W8 599 aa18.09■□□□□ 0.49
CCDC43-205ENST00000592333 ANKRD12Q6UB98 2062 aa18.09■□□□□ 0.49
CCDC43-205ENST00000592333 PCM1Q15154 2024 aa18.08■□□□□ 0.49
CCDC43-205ENST00000592333 PHF2O75151 1096 aa18.08■□□□□ 0.48
CCDC43-205ENST00000592333 C1orf105O95561 183 aa18.08■□□□□ 0.48
CCDC43-205ENST00000592333 CTSBP07858 339 aa18.08■□□□□ 0.48
CCDC43-205ENST00000592333 EMP3P54852 163 aa18.08■□□□□ 0.48
CCDC43-205ENST00000592333 NKG7Q16617 165 aa18.08■□□□□ 0.48
CCDC43-205ENST00000592333 PRMT9Q6P2P2 845 aa18.08■□□□□ 0.48
CCDC43-205ENST00000592333 LRRC8BQ6P9F7 803 aa18.08■□□□□ 0.48
CCDC43-205ENST00000592333 Q6ZS92 163 aa18.08■□□□□ 0.48
CCDC43-205ENST00000592333 GAS2L3Q86XJ1 694 aa18.08■□□□□ 0.48
CCDC43-205ENST00000592333 KRT222Q8N1A0 295 aa18.08■□□□□ 0.48
CCDC43-205ENST00000592333 SNRNP40Q96DI7 357 aaKnown RBP18.08■□□□□ 0.48
CCDC43-205ENST00000592333 BARD1Q99728 777 aaKnown RBP18.08■□□□□ 0.48
CCDC43-205ENST00000592333 SELENOSQ9BQE4 189 aa18.08■□□□□ 0.48
CCDC43-205ENST00000592333 SEMA3GQ9NS98 782 aa18.08■□□□□ 0.48
CCDC43-205ENST00000592333 MARCH4Q9P2E8 410 aaPredicted RBP18.08■□□□□ 0.48
CCDC43-205ENST00000592333 TTC7AQ9ULT0 858 aaPredicted RBP18.08■□□□□ 0.48
CCDC43-205ENST00000592333 VPS9D1Q9Y2B5 631 aa18.08■□□□□ 0.48
CCDC43-205ENST00000592333 FAM169AQ9Y6X4 670 aa18.08■□□□□ 0.48
CCDC43-205ENST00000592333 SNRNP200O75643 2136 aaKnown RBP18.07■□□□□ 0.48
CCDC43-205ENST00000592333 VSTM2BA6NLU5 285 aa18.07■□□□□ 0.48
CCDC43-205ENST00000592333 MATN4O95460 622 aa18.07■□□□□ 0.48
CCDC43-205ENST00000592333 ESR1P03372 595 aa18.07■□□□□ 0.48
CCDC43-205ENST00000592333 TPSB2P20231 275 aa18.07■□□□□ 0.48
CCDC43-205ENST00000592333 GRIA3P42263 894 aa18.07■□□□□ 0.48
CCDC43-205ENST00000592333 SESN2P58004 480 aaPredicted RBP18.07■□□□□ 0.48
CCDC43-205ENST00000592333 SARNPP82979 210 aaKnown RBP18.07■□□□□ 0.48
CCDC43-205ENST00000592333 TPSAB1Q15661 275 aa18.07■□□□□ 0.48
CCDC43-205ENST00000592333 TYSND1Q2T9J0 566 aa18.07■□□□□ 0.48
CCDC43-205ENST00000592333 CRB2Q5IJ48 1285 aa18.07■□□□□ 0.48
CCDC43-205ENST00000592333 PRAMEF13Q5VWM6 474 aa18.07■□□□□ 0.48
CCDC43-205ENST00000592333 IGFL2Q6UWQ7 119 aa18.07■□□□□ 0.48
CCDC43-205ENST00000592333 SPSB2Q99619 263 aa18.07■□□□□ 0.48
CCDC43-205ENST00000592333 ILKAPQ9H0C8 392 aaPredicted RBP18.07■□□□□ 0.48
CCDC43-205ENST00000592333 PLEKHB1Q9UF11 243 aaPredicted RBP18.07■□□□□ 0.48
CCDC43-205ENST00000592333 WIPF3A6NGB9 483 aa18.06■□□□□ 0.48
CCDC43-205ENST00000592333 CBX6O95503 412 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms