RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 MED16Q9Y2X0 877 aa14.62□□□□□ -0.07
ERCC1-213ENST00000592023 SPTBP11277 2137 aa14.62□□□□□ -0.07
ERCC1-213ENST00000592023 C9J4A7 227 aa14.61□□□□□ -0.07
ERCC1-213ENST00000592023 H3BMH7 237 aa14.61□□□□□ -0.07
ERCC1-213ENST00000592023 PYCARD-AS1I3L0S3 204 aa14.61□□□□□ -0.07
ERCC1-213ENST00000592023 TTI1O43156 1089 aa14.61□□□□□ -0.07
ERCC1-213ENST00000592023 MATN4O95460 622 aa14.61□□□□□ -0.07
ERCC1-213ENST00000592023 CATP04040 527 aaKnown RBP14.61□□□□□ -0.07
ERCC1-213ENST00000592023 CBSLP0DN79 551 aa14.61□□□□□ -0.07
ERCC1-213ENST00000592023 ERVK-10P10266 1014 aa14.61□□□□□ -0.07
ERCC1-213ENST00000592023 AGXTP21549 392 aa14.61□□□□□ -0.07
ERCC1-213ENST00000592023 IVDP26440 423 aa14.61□□□□□ -0.07
ERCC1-213ENST00000592023 CBSP35520 551 aa14.61□□□□□ -0.07
ERCC1-213ENST00000592023 FASTKQ14296 549 aaKnown RBP14.61□□□□□ -0.07
ERCC1-213ENST00000592023 SLC9A5Q14940 896 aa14.61□□□□□ -0.07
ERCC1-213ENST00000592023 NCF4Q15080 339 aa14.61□□□□□ -0.07
ERCC1-213ENST00000592023 SPANXN3Q5MJ09 141 aa14.61□□□□□ -0.07
ERCC1-213ENST00000592023 HP1BP3Q5SSJ5 553 aaPredicted RBP14.61□□□□□ -0.07
ERCC1-213ENST00000592023 ZNF385CQ66K41 422 aaPredicted RBP14.61□□□□□ -0.07
ERCC1-213ENST00000592023 SYDE1Q6ZW31 735 aaPredicted RBP14.61□□□□□ -0.07
ERCC1-213ENST00000592023 PTRH1Q86Y79 214 aaKnown RBP14.61□□□□□ -0.07
ERCC1-213ENST00000592023 SEC14L1Q92503 715 aa14.61□□□□□ -0.07
ERCC1-213ENST00000592023 KCNJ9Q92806 393 aa14.61□□□□□ -0.07
ERCC1-213ENST00000592023 PWWP2AQ96N64 755 aa14.61□□□□□ -0.07
ERCC1-213ENST00000592023 RUNDC3BQ96NL0 473 aa14.61□□□□□ -0.07
ERCC1-213ENST00000592023 NDNQ99608 321 aa14.61□□□□□ -0.07
ERCC1-213ENST00000592023 GPR21Q99679 349 aa14.61□□□□□ -0.07
ERCC1-213ENST00000592023 MIPEPQ99797 713 aa14.61□□□□□ -0.07
ERCC1-213ENST00000592023 EBNA1BP2Q99848 306 aaKnown RBP14.61□□□□□ -0.07
ERCC1-213ENST00000592023 NLNQ9BYT8 704 aa14.61□□□□□ -0.07
ERCC1-213ENST00000592023 TRIM31Q9BZY9 425 aa14.61□□□□□ -0.07
ERCC1-213ENST00000592023 ZNF71Q9NQZ8 489 aaPredicted RBP14.61□□□□□ -0.07
ERCC1-213ENST00000592023 TXLNGQ9NUQ3 528 aa14.61□□□□□ -0.07
ERCC1-213ENST00000592023 EURLQ9NYK6 297 aa14.61□□□□□ -0.07
ERCC1-213ENST00000592023 SRPK3Q9UPE1 567 aa14.61□□□□□ -0.07
ERCC1-213ENST00000592023 CHMP2BQ9UQN3 213 aa14.61□□□□□ -0.07
ERCC1-213ENST00000592023 AP1M2Q9Y6Q5 423 aa14.61□□□□□ -0.07
ERCC1-213ENST00000592023 A0A1W2PPV9 198 aa14.6□□□□□ -0.07
ERCC1-213ENST00000592023 CCDC188H7C350 402 aa14.6□□□□□ -0.07
ERCC1-213ENST00000592023 PRICKLE3O43900 615 aaPredicted RBP14.6□□□□□ -0.07
ERCC1-213ENST00000592023 NRP2O60462 931 aa14.6□□□□□ -0.07
ERCC1-213ENST00000592023 PSIP1O75475 530 aaKnown RBP14.6□□□□□ -0.07
ERCC1-213ENST00000592023 RFPL1O75677 317 aa14.6□□□□□ -0.07
ERCC1-213ENST00000592023 HAUS5O94927 633 aa14.6□□□□□ -0.07
ERCC1-213ENST00000592023 RECKO95980 971 aa14.6□□□□□ -0.07
ERCC1-213ENST00000592023 CAPN1P07384 714 aa14.6□□□□□ -0.07
ERCC1-213ENST00000592023 RAB40ALP0C0E4 278 aa14.6□□□□□ -0.07
ERCC1-213ENST00000592023 GRIA3P42263 894 aa14.6□□□□□ -0.07
ERCC1-213ENST00000592023 PAFAH1B1P43034 410 aa14.6□□□□□ -0.07
ERCC1-213ENST00000592023 PMS2P54278 862 aa14.6□□□□□ -0.07
ERCC1-213ENST00000592023 CHAF1BQ13112 559 aa14.6□□□□□ -0.07
ERCC1-213ENST00000592023 TSTA3Q13630 321 aaPredicted RBP14.6□□□□□ -0.07
ERCC1-213ENST00000592023 MORF4L2Q15014 288 aa14.6□□□□□ -0.07
ERCC1-213ENST00000592023 CPZQ66K79 652 aa14.6□□□□□ -0.07
ERCC1-213ENST00000592023 FCRL6Q6DN72 434 aa14.6□□□□□ -0.07
ERCC1-213ENST00000592023 RHBDD2Q6NTF9 364 aa14.6□□□□□ -0.07
ERCC1-213ENST00000592023 FIGLAQ6QHK4 219 aa14.6□□□□□ -0.07
ERCC1-213ENST00000592023 IGDCC3Q8IVU1 814 aa14.6□□□□□ -0.07
ERCC1-213ENST00000592023 CPNE9Q8IYJ1 553 aa14.6□□□□□ -0.07
ERCC1-213ENST00000592023 OR2L3Q8NG85 312 aa14.6□□□□□ -0.07
ERCC1-213ENST00000592023 OR9A1PQ8NGU1 263 aa14.6□□□□□ -0.07
ERCC1-213ENST00000592023 HMGCLL1Q8TB92 370 aa14.6□□□□□ -0.07
ERCC1-213ENST00000592023 CD200R1Q8TD46 325 aa14.6□□□□□ -0.07
ERCC1-213ENST00000592023 CFAP36Q96G28 342 aa14.6□□□□□ -0.07
ERCC1-213ENST00000592023 ABHD17AQ96GS6 310 aa14.6□□□□□ -0.07
ERCC1-213ENST00000592023 DPH2Q9BQC3 489 aaPredicted RBP14.6□□□□□ -0.07
ERCC1-213ENST00000592023 NDC1Q9BTX1 674 aa14.6□□□□□ -0.07
ERCC1-213ENST00000592023 TRIM4Q9C037 500 aa14.6□□□□□ -0.07
ERCC1-213ENST00000592023 FAM114A2Q9NRY5 505 aa14.6□□□□□ -0.07
ERCC1-213ENST00000592023 SLC17A6Q9P2U8 582 aa14.6□□□□□ -0.07
ERCC1-213ENST00000592023 TCFL5Q9UL49 500 aa14.6□□□□□ -0.07
ERCC1-213ENST00000592023 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.6□□□□□ -0.07
ERCC1-213ENST00000592023 FER1L5A0AVI2 2057 aa14.6□□□□□ -0.07
ERCC1-213ENST00000592023 ARGFXA6NJG6 315 aa14.59□□□□□ -0.07
ERCC1-213ENST00000592023 J3QKU1 62 aa14.59□□□□□ -0.07
ERCC1-213ENST00000592023 MYO1CO00159 1063 aa14.59□□□□□ -0.07
ERCC1-213ENST00000592023 VPS26AO75436 327 aa14.59□□□□□ -0.07
ERCC1-213ENST00000592023 DNAJB5O75953 348 aa14.59□□□□□ -0.07
ERCC1-213ENST00000592023 FKBP9O95302 570 aa14.59□□□□□ -0.07
ERCC1-213ENST00000592023 TTC4O95801 387 aa14.59□□□□□ -0.07
ERCC1-213ENST00000592023 SYF2O95926 243 aaKnown RBP14.59□□□□□ -0.07
ERCC1-213ENST00000592023 ERGP11308 486 aa14.59□□□□□ -0.07
ERCC1-213ENST00000592023 NR1D1P20393 614 aa14.59□□□□□ -0.07
ERCC1-213ENST00000592023 MCM3P25205 808 aa14.59□□□□□ -0.07
ERCC1-213ENST00000592023 ITGA8P53708 1063 aa14.59□□□□□ -0.07
ERCC1-213ENST00000592023 CYP2A13Q16696 494 aa14.59□□□□□ -0.07
ERCC1-213ENST00000592023 LACTB2Q53H82 288 aaPredicted RBP14.59□□□□□ -0.07
ERCC1-213ENST00000592023 HIBCHQ6NVY1 386 aaPredicted RBP14.59□□□□□ -0.07
ERCC1-213ENST00000592023 TLDC1Q6P9B6 456 aa14.59□□□□□ -0.07
ERCC1-213ENST00000592023 SUSD1Q6UWL2 747 aa14.59□□□□□ -0.07
ERCC1-213ENST00000592023 NEK10Q6ZWH5 1172 aa14.59□□□□□ -0.07
ERCC1-213ENST00000592023 PIWIL4Q7Z3Z4 852 aaKnown RBP14.59□□□□□ -0.07
ERCC1-213ENST00000592023 MCATQ8IVS2 390 aaKnown RBP14.59□□□□□ -0.07
ERCC1-213ENST00000592023 PDIK1LQ8N165 341 aa14.59□□□□□ -0.07
ERCC1-213ENST00000592023 C17orf53Q8N3J3 647 aaPredicted RBP14.59□□□□□ -0.07
ERCC1-213ENST00000592023 C2CD4AQ8NCU7 369 aaPredicted RBP14.59□□□□□ -0.07
ERCC1-213ENST00000592023 PROKR1Q8TCW9 393 aa14.59□□□□□ -0.07
ERCC1-213ENST00000592023 CERS2Q96G23 380 aa14.59□□□□□ -0.07
ERCC1-213ENST00000592023 SNF8Q96H20 258 aa14.59□□□□□ -0.07
ERCC1-213ENST00000592023 GBP5Q96PP8 586 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms