RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 M0QZQ0 153 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 CCL16O15467 120 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 TBX1O43435 398 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 OPN1SWP03999 348 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 ADH1AP07327 375 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 PCSK2P16519 638 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 ABHD18Q0P651 414 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 COX10Q12887 443 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 LDLRAD1Q5T700 205 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 ENPP6Q6UWR7 440 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 DSG4Q86SJ6 1040 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 ACDQ96AP0 544 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 HSH2DQ96JZ2 352 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 KCNS3Q9BQ31 491 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 WRAP53Q9BUR4 548 aaKnown RBP16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 RNF208Q9H0X6 261 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 ZNF282Q9UDV7 671 aaPredicted RBP16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 TFECO14948 347 aaPredicted RBP16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 COCHO43405 550 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 OR10G2Q8NGC3 310 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 FCGR1BQ92637 280 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 ISL2Q96A47 359 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 HTATIP2Q9BUP3 242 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 SUV39H2Q9H5I1 410 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 MAGEE1Q9HCI5 957 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 XPNPEP2O43895 674 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 GNAO1P09471 354 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 SGCGQ13326 291 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 PTCHD3Q3KNS1 767 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 PLEKHG6Q3KR16 790 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 PLEKHM3Q6ZWE6 761 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 USP43Q70EL4 1123 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 GPR65Q8IYL9 337 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 PHC3Q8NDX5 983 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 SUSD6Q92537 303 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 TMEM125Q96AQ2 219 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 SLC38A2Q96QD8 506 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 YIPF2Q9BWQ6 316 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 TNNI3P19429 210 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 NOS3P29474 1203 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 VBP1P61758 197 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 GANABQ14697 944 aaKnown RBP16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 COLEC12Q5KU26 742 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 C6orf141Q5SZD1 244 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 TFAP2CQ92754 450 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 C11orf84Q9BUA3 381 aaPredicted RBP16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 CSNK1G1Q9HCP0 422 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 ZC4H2Q9NQZ6 224 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 SEMA3GQ9NS98 782 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 SEC14L3Q9UDX4 400 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 SPO11Q9Y5K1 396 aa16.71■□□□□ 0.27
SMARCA4-215ENST00000590574 LDB2O43679 373 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 CHRM1P11229 460 aaPredicted RBP16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 MAGEA12P43365 314 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 ERVPABLB-1P60509 514 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 TXNDC8Q6A555 127 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 KLHL35Q6PF15 583 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 TMEM220Q6QAJ8 160 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 FAM131AQ6UXB0 335 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 MBOAT1Q6ZNC8 495 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 TTC9BQ8N6N2 239 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 COL26A1Q96A83 441 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 RDH12Q96NR8 316 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 GPR62Q9BZJ7 368 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 SLC9A3R1O14745 358 aaPredicted RBP16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 GABBR2O75899 941 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 GADD45GO95257 159 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 CXCL14O95715 111 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 TFAP2AP05549 437 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 CBSLP0DN79 551 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 RPL10P27635 214 aaKnown RBP16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 CBSP35520 551 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 HTR6P50406 440 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 IL18R1Q13478 541 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 GMEB1Q9Y692 573 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 A0A0J9YVX5 310 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 PIPSLA2A3N6 862 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 C7orf72A4D263 438 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 PCDH7O60245 1069 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 GUCY1B2O75343 617 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 CCNKO75909 580 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 ALDOCP09972 364 aaKnown RBP16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 FPR1P21462 350 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 FEN1P39748 380 aaKnown RBP16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 MAPK9P45984 424 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 NFATC2Q13469 925 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 LRRC66Q68CR7 880 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 RD3Q7Z3Z2 195 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 C17orf64Q86WR6 236 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 GATAD2AQ86YP4 633 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 C10orf53Q8N6V4 93 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 TEX47Q8TBZ9 253 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 MAGEB3O15480 346 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 HPRP00739 348 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 CLTBP09497 229 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 NEK5Q6P3R8 708 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 LINC01465Q8N7H1 131 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 ZNF347Q96SE7 839 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 TMED5Q9Y3A6 229 aa16.7■□□□□ 0.26
SMARCA4-215ENST00000590574 OARD1Q9Y530 152 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms