RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 CCDC110Q8TBZ0 833 aa12.19□□□□□ -0.46
PRKCSH-210ENST00000589990 TFB1MQ8WVM0 346 aaKnown RBP12.19□□□□□ -0.46
PRKCSH-210ENST00000589990 HAUS1Q96CS2 278 aa12.19□□□□□ -0.46
PRKCSH-210ENST00000589990 IL17FQ96PD4 163 aa12.19□□□□□ -0.46
PRKCSH-210ENST00000589990 SPOCK3Q9BQ16 436 aa12.19□□□□□ -0.46
PRKCSH-210ENST00000589990 MENTQ9BUN1 341 aa12.19□□□□□ -0.46
PRKCSH-210ENST00000589990 MAK16Q9BXY0 300 aaKnown RBP12.19□□□□□ -0.46
PRKCSH-210ENST00000589990 ENKD1Q9H0I2 346 aa12.19□□□□□ -0.46
PRKCSH-210ENST00000589990 ZDHHC3Q9NYG2 299 aa12.19□□□□□ -0.46
PRKCSH-210ENST00000589990 OR6C2Q9NZP2 312 aa12.19□□□□□ -0.46
PRKCSH-210ENST00000589990 C3orf18Q9UK00 162 aa12.19□□□□□ -0.46
PRKCSH-210ENST00000589990 MEMO1Q9Y316 297 aa12.19□□□□□ -0.46
PRKCSH-210ENST00000589990 PCDHGB6Q9Y5F9 930 aa12.19□□□□□ -0.46
PRKCSH-210ENST00000589990 AKAP6Q13023 2319 aa12.19□□□□□ -0.46
PRKCSH-210ENST00000589990 NSG1A0A0A6YYJ2 146 aa12.18□□□□□ -0.46
PRKCSH-210ENST00000589990 CTSVO60911 334 aa12.18□□□□□ -0.46
PRKCSH-210ENST00000589990 USP1O94782 785 aa12.18□□□□□ -0.46
PRKCSH-210ENST00000589990 CRYABP02511 175 aaKnown RBP12.18□□□□□ -0.46
PRKCSH-210ENST00000589990 ZGLP1P0C6A0 271 aa12.18□□□□□ -0.46
PRKCSH-210ENST00000589990 TNNT1P13805 278 aa12.18□□□□□ -0.46
PRKCSH-210ENST00000589990 CD1EP15812 388 aa12.18□□□□□ -0.46
PRKCSH-210ENST00000589990 MC4RP32245 332 aa12.18□□□□□ -0.46
PRKCSH-210ENST00000589990 NSG1P42857 185 aa12.18□□□□□ -0.46
PRKCSH-210ENST00000589990 SMSP52788 366 aa12.18□□□□□ -0.46
PRKCSH-210ENST00000589990 RPA4Q13156 261 aa12.18□□□□□ -0.46
PRKCSH-210ENST00000589990 MPP3Q13368 585 aa12.18□□□□□ -0.46
PRKCSH-210ENST00000589990 TFDP3Q5H9I0 405 aa12.18□□□□□ -0.46
PRKCSH-210ENST00000589990 FRMPD2BQ6IN97 320 aa12.18□□□□□ -0.46
PRKCSH-210ENST00000589990 NLRP9Q7RTR0 991 aa12.18□□□□□ -0.46
PRKCSH-210ENST00000589990 SNX20Q7Z614 316 aa12.18□□□□□ -0.46
PRKCSH-210ENST00000589990 PIANPQ8IYJ0 282 aa12.18□□□□□ -0.46
PRKCSH-210ENST00000589990 DNAJB8Q8NHS0 232 aa12.18□□□□□ -0.46
PRKCSH-210ENST00000589990 ULK4Q96C45 1275 aa12.18□□□□□ -0.46
PRKCSH-210ENST00000589990 FSD1LQ9BXM9 530 aa12.18□□□□□ -0.46
PRKCSH-210ENST00000589990 HES7Q9BYE0 225 aa12.18□□□□□ -0.46
PRKCSH-210ENST00000589990 GSX1Q9H4S2 264 aaPredicted RBP12.18□□□□□ -0.46
PRKCSH-210ENST00000589990 NXT1Q9UKK6 140 aaKnown RBP12.18□□□□□ -0.46
PRKCSH-210ENST00000589990 ZNF835Q9Y2P0 537 aa12.18□□□□□ -0.46
PRKCSH-210ENST00000589990 MRPS2Q9Y399 296 aaKnown RBP12.18□□□□□ -0.46
PRKCSH-210ENST00000589990 TRBV5-4A0A0C4DH59 114 aa12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 KRT87PA6NCN2 255 aa12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 C2orf81A6NN90 581 aa12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 CFAP99D6REC4 459 aa12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 FAM227AF5H4B4 570 aa12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 PRAMEF2O60811 474 aa12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 SERPING1P05155 500 aa12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 SERPINA7P05543 415 aa12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 PIM1P11309 404 aaPredicted RBP12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 CD99P14209 185 aa12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 ITGALP20701 1170 aa12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 ACRV1P26436 265 aa12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 PKLRP30613 574 aa12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 ADRA1AP35348 466 aa12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 TNNT3P45378 269 aaPredicted RBP12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 CSE1LP55060 971 aaKnown RBP12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 VSX2P58304 361 aaPredicted RBP12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 HSF1Q00613 529 aa12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 RBPJQ06330 500 aa12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 GRM7Q14831 915 aa12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 KIR2DS3Q14952 304 aa12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 DBN1Q16643 649 aa12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.17□□□□□ -0.461e-9■□□□□ 11
PRKCSH-210ENST00000589990 RANBP10Q6VN20 620 aa12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 NDUFAF7Q7L592 441 aa12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 TBC1D21Q8IYX1 336 aa12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 SHISA5Q8N114 240 aa12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 OR5K2Q8NHB8 316 aa12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 MIEF2Q96C03 454 aa12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 DNAJC1Q96KC8 554 aaKnown RBP12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 ZNF285Q96NJ3 590 aa12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 TREX2Q9BQ50 279 aaPredicted RBP12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 SYNPO2LQ9H987 977 aa12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 UVRAGQ9P2Y5 699 aa12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 RSPH14Q9UHP6 348 aa12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.17□□□□□ -0.465e-10■■■□□ 14.7
PRKCSH-210ENST00000589990 GTF3C1Q12789 2109 aa12.17□□□□□ -0.46
PRKCSH-210ENST00000589990 VPS13CQ709C8 3753 aa12.16□□□□□ -0.46
PRKCSH-210ENST00000589990 HRNRQ86YZ3 2850 aaPredicted RBP12.16□□□□□ -0.46
PRKCSH-210ENST00000589990 LOC105369274A0A096LPK9 316 aa12.16□□□□□ -0.46
PRKCSH-210ENST00000589990 IGHV1-45A0A0A0MS14 117 aa12.16□□□□□ -0.46
PRKCSH-210ENST00000589990 LOC102723532A0A0G2JNH3 316 aa12.16□□□□□ -0.46
PRKCSH-210ENST00000589990 C5orf60A6NFR6 353 aa12.16□□□□□ -0.46
PRKCSH-210ENST00000589990 ADAM10O14672 748 aa12.16□□□□□ -0.46
PRKCSH-210ENST00000589990 CST8O60676 142 aa12.16□□□□□ -0.46
PRKCSH-210ENST00000589990 BMP10O95393 424 aa12.16□□□□□ -0.46
PRKCSH-210ENST00000589990 ZFXP17010 805 aaPredicted RBP12.16□□□□□ -0.46
PRKCSH-210ENST00000589990 ARHGAP25P42331 645 aa12.16□□□□□ -0.46
PRKCSH-210ENST00000589990 CDKN2BP42772 138 aa12.16□□□□□ -0.46
PRKCSH-210ENST00000589990 CASP6P55212 293 aa12.16□□□□□ -0.46
PRKCSH-210ENST00000589990 GRB7Q14451 532 aa12.16□□□□□ -0.46
PRKCSH-210ENST00000589990 SPARCL1Q14515 664 aa12.16□□□□□ -0.46
PRKCSH-210ENST00000589990 WASHC2DQ5SRD0 308 aa12.16□□□□□ -0.46
PRKCSH-210ENST00000589990 KAZNQ674X7 775 aa12.16□□□□□ -0.46
PRKCSH-210ENST00000589990 DENND5AQ6IQ26 1287 aa12.16□□□□□ -0.46
PRKCSH-210ENST00000589990 CNSTQ6PJW8 725 aa12.16□□□□□ -0.46
PRKCSH-210ENST00000589990 FIGLAQ6QHK4 219 aa12.16□□□□□ -0.46
PRKCSH-210ENST00000589990 Q6ZPB1 254 aaPredicted RBP12.16□□□□□ -0.46
PRKCSH-210ENST00000589990 NEK10Q6ZWH5 1172 aa12.16□□□□□ -0.46
PRKCSH-210ENST00000589990 VSIG1Q86XK7 387 aa12.16□□□□□ -0.46
PRKCSH-210ENST00000589990 SPPL2CQ8IUH8 684 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms