RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	AP4S1	Q9Y587	144 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	15	□□□□□ -0.01
DDX39A-209	ENST00000589318	PTGDR2	Q9Y5Y4	395 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	TRIM64C	A6NLI5	447 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318		H3BNH8	94 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	ENO2	P09104	434 aa	Predicted RBP	15	□□□□□ -0.01
DDX39A-209	ENST00000589318	CDH3	P22223	829 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	GDF5	P43026	501 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	RPIA	P49247	311 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	C21orf59	P57076	290 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	ERVPABLB-1	P60509	514 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	MRPS21	P82921	87 aa	Known RBP	15	□□□□□ -0.01
DDX39A-209	ENST00000589318	KLF10	Q13118	480 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	SP140	Q13342	867 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	DEPDC1	Q5TB30	811 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	NXN	Q6DKJ4	435 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	LARP4	Q71RC2	724 aa	Known RBP eCLIP	15	□□□□□ -0.01	5e-6	■■■□□ 15.1
DDX39A-209	ENST00000589318	AMIGO2	Q86SJ2	522 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	GPR180	Q86V85	440 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	EGFL8	Q99944	293 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	CD244	Q9BZW8	370 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	ZCCHC2	Q9C0B9	1178 aa	Known RBP	15	□□□□□ -0.01
DDX39A-209	ENST00000589318	FAM8A1	Q9UBU6	413 aa		15	□□□□□ -0.01
DDX39A-209	ENST00000589318	PIP5K1B	O14986	540 aa		14.99	□□□□□ -0.01
DDX39A-209	ENST00000589318	SLC16A5	O15375	505 aa		14.99	□□□□□ -0.01
DDX39A-209	ENST00000589318	PLRG1	O43660	514 aa	Known RBP	14.99	□□□□□ -0.01
DDX39A-209	ENST00000589318	COX4I1	P13073	169 aa		14.99	□□□□□ -0.01
DDX39A-209	ENST00000589318	ZNF8	P17098	575 aa	Predicted RBP	14.99	□□□□□ -0.01
DDX39A-209	ENST00000589318	FUT4	P22083	530 aa		14.99	□□□□□ -0.01
DDX39A-209	ENST00000589318	PREP	P48147	710 aa		14.99	□□□□□ -0.01
DDX39A-209	ENST00000589318	NEK2	P51955	445 aa		14.99	□□□□□ -0.01
DDX39A-209	ENST00000589318	GTF2H2	Q13888	395 aa		14.99	□□□□□ -0.01
DDX39A-209	ENST00000589318	CCIN	Q13939	588 aa		14.99	□□□□□ -0.01
DDX39A-209	ENST00000589318	RBBP7	Q16576	425 aa		14.99	□□□□□ -0.01
DDX39A-209	ENST00000589318	KCTD21	Q4G0X4	260 aa		14.99	□□□□□ -0.01
DDX39A-209	ENST00000589318	TCHHL1	Q5QJ38	904 aa	Predicted RBP	14.99	□□□□□ -0.01
DDX39A-209	ENST00000589318	GTF2H2C	Q6P1K8	395 aa		14.99	□□□□□ -0.01
DDX39A-209	ENST00000589318	LETMD1	Q6P1Q0	360 aa		14.99	□□□□□ -0.01
DDX39A-209	ENST00000589318	GPRIN3	Q6ZVF9	776 aa		14.99	□□□□□ -0.01
DDX39A-209	ENST00000589318	HEATR4	Q86WZ0	1026 aa		14.99	□□□□□ -0.01
DDX39A-209	ENST00000589318	MARK4	Q96L34	752 aa		14.99	□□□□□ -0.01
DDX39A-209	ENST00000589318	LINC00615	Q96LM1	132 aa	Predicted RBP	14.99	□□□□□ -0.01
DDX39A-209	ENST00000589318	GPATCH1	Q9BRR8	931 aa	Known RBP	14.99	□□□□□ -0.01
DDX39A-209	ENST00000589318	NOL11	Q9H8H0	719 aa	Known RBP	14.99	□□□□□ -0.01
DDX39A-209	ENST00000589318	MBNL1	Q9NR56	388 aa	Known RBP	14.99	□□□□□ -0.01
DDX39A-209	ENST00000589318	WWOX	Q9NZC7	414 aa		14.99	□□□□□ -0.01
DDX39A-209	ENST00000589318	TIMM22	Q9Y584	194 aa		14.99	□□□□□ -0.01
DDX39A-209	ENST00000589318		A0A087WXM4	84 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	PRSS51	A0A1B0GVH4	220 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	ATP6AP2	A0A1C7CYW4	349 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	KRT87P	A6NCN2	255 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	VEGFD	O43915	354 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	ATP6AP2	O75787	350 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	OR4F21	O95013	312 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	DNTT	P04053	509 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	PCCB	P05166	539 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	ANXA5	P08758	320 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	GSTM1	P09488	218 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	GLUL	P15104	373 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	PDHA2	P29803	388 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	GGT5	P36269	586 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	STT3A	P46977	705 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	ADPRH	P54922	357 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	PKNOX1	P55347	436 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	TRAF3	Q13114	568 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	SMAD2	Q15796	467 aa	Known RBP	14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	MOG	Q16653	247 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	METTL2B	Q6P1Q9	378 aa	Known RBP	14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	TRMT11	Q7Z4G4	463 aa	Known RBP	14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	C11orf96	Q7Z7L8	435 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	SLC22A15	Q8IZD6	547 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	DCBLD1	Q8N8Z6	715 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	TP53I13	Q8NBR0	393 aa	Predicted RBP	14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	HIPK4	Q8NE63	616 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	SKA2	Q8WVK7	121 aa	Predicted RBP	14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	RMND5B	Q96G75	393 aa	Predicted RBP	14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	PLEKHA8	Q96JA3	519 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	ZNF597	Q96LX8	424 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	CDK15	Q96Q40	435 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	LGR4	Q9BXB1	951 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	C1QTNF2	Q9BXJ5	285 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	CLK4	Q9HAZ1	481 aa	Known RBP	14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	ATAD3A	Q9NVI7	634 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	GID8	Q9NWU2	228 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	ARL15	Q9NXU5	204 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	COPG1	Q9Y678	874 aa	Known RBP	14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	CNOT3	O75175	753 aa	Known RBP	14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	PSIP1	O75475	530 aa	Known RBP	14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	UROS	P10746	265 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	PBLD	P30039	288 aa	Predicted RBP	14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	ADSL	P30566	484 aa	Predicted RBP	14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	CDK3	Q00526	305 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	FLOT2	Q14254	428 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	SYTL3	Q4VX76	610 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	TMEM92	Q6UXU6	159 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	CARM1	Q86X55	608 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	TRAPPC5	Q8IUR0	188 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	RPLP0P6	Q8NHW5	317 aa		14.98	□□□□□ -0.01
DDX39A-209	ENST00000589318	FOXJ1	Q92949	421 aa		14.98	□□□□□ -0.01

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms