RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 CEP44Q9C0F1 390 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 ING2Q9H160 280 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 ELOVL6Q9H5J4 265 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 RPF2Q9H7B2 306 aaKnown RBP7.23□□□□□ -1.25
ZNF540-206ENST00000589117 RAD18Q9NS91 495 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 SLAMF8Q9P0V8 285 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 INVSQ9Y283 1065 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 ASB1Q9Y576 335 aa7.23□□□□□ -1.25
ZNF540-206ENST00000589117 A0A096LPE4 126 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 A0A1W2PPZ6 126 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 ELOVL7A1L3X0 281 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 C16orf96A6NNT2 1141 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 H3BSA7 217 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 MANBAO00462 879 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 FFAR3O14843 346 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 ANKRD28O15084 1053 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 SLC16A5O15375 505 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 GPR42O15529 346 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 RECQL5O94762 991 aaPredicted RBP7.22□□□□□ -1.25
ZNF540-206ENST00000589117 SEC24DO94855 1032 aaPredicted RBP7.22□□□□□ -1.25
ZNF540-206ENST00000589117 HPRP00739 348 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 GGT1P19440 569 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 POU3F3P20264 500 aaPredicted RBP7.22□□□□□ -1.25
ZNF540-206ENST00000589117 S100A3P33764 101 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 GGT5P36269 586 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 ALDH3A2P51648 485 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 AP1S2P56377 157 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 MLLT1Q03111 559 aaPredicted RBP7.22□□□□□ -1.25
ZNF540-206ENST00000589117 ZNF33BQ06732 778 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 CYP4F3Q08477 520 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 LMAN2Q12907 356 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 PTPRRQ15256 657 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 ATG9BQ674R7 924 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 REC114Q7Z4M0 266 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 ADHFE1Q8IWW8 467 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 TMEM132CQ8N3T6 1108 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 SVOPLQ8N434 492 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 LIX1Q8N485 282 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 ZNF555Q8NEP9 628 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 AURKBQ96GD4 344 aaPredicted RBP7.22□□□□□ -1.25
ZNF540-206ENST00000589117 ITCHQ96J02 903 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 SLC22A12Q96S37 553 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 GMPR2Q9P2T1 348 aaKnown RBP7.22□□□□□ -1.25
ZNF540-206ENST00000589117 ADGRE2Q9UHX3 823 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 ZNF639Q9UID6 485 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 PPIL1Q9Y3C6 166 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 PRKAB1Q9Y478 270 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 ORC6Q9Y5N6 252 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 CEPT1Q9Y6K0 416 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 GBF1Q92538 1859 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 A0A0U1RQS6 177 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 LOC730098B7Z3J9 87 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 G3V2T6 193 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 J3QW42 95 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 GAPDHSO14556 408 aaPredicted RBP7.22□□□□□ -1.25
ZNF540-206ENST00000589117 ACOX3O15254 700 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 GPR39O43194 453 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 EFSO43281 561 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 PEX14O75381 377 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 FGF19O95750 216 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 CYP2A6P11509 494 aaPredicted RBP7.22□□□□□ -1.25
ZNF540-206ENST00000589117 ZNF30P17039 623 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 NNMTP40261 264 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 MAPK9P45984 424 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 HTR6P50406 440 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 ARHGDIAP52565 204 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 DGKQP52824 942 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 OR4D2P58180 307 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 MTPNP58546 118 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 SP140Q13342 867 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 CDKN3Q16667 212 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 PHKG1Q16816 387 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 TCTN1Q2MV58 587 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 C2orf27AQ580R0 203 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 SGO1Q5FBB7 561 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 PLEKHS1Q5SXH7 462 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 OTUD3Q5T2D3 398 aaPredicted RBP7.22□□□□□ -1.25
ZNF540-206ENST00000589117 CCNYL2Q5T2Q4 361 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 LRRC66Q68CR7 880 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 CRTC1Q6UUV9 634 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 UBE2R2Q712K3 238 aaPredicted RBP7.22□□□□□ -1.25
ZNF540-206ENST00000589117 EPHX4Q8IUS5 362 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 DTWD1Q8N5C7 304 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 ZNF420Q8TAQ5 688 aaPredicted RBP7.22□□□□□ -1.25
ZNF540-206ENST00000589117 WFDC5Q8TCV5 224 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 BPIFB1Q8TDL5 484 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 SELENOMQ8WWX9 145 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 FIG4Q92562 907 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 GTF2H4Q92759 462 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 USP7Q93009 1102 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 FAM162AQ96A26 154 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 TIFAQ96CG3 184 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 DEFB118Q96PH6 123 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 HBEGFQ99075 208 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 SLC12A9Q9BXP2 914 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 CLMPQ9H6B4 373 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 ZFP14Q9HCL3 533 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 DDX18Q9NVP1 670 aaKnown RBP7.22□□□□□ -1.25
ZNF540-206ENST00000589117 ELOVL2Q9NXB9 296 aa7.22□□□□□ -1.25
ZNF540-206ENST00000589117 DNAJB9Q9UBS3 223 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms