RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 PRR20CP86479 221 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 PRR20DP86480 221 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 PRR20BP86481 221 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 PRR20AP86496 221 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 MPP1Q00013 466 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 CDK3Q00526 305 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 CACNG1Q06432 222 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 CDC20Q12834 499 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 ILF3Q12906 894 aaKnown RBP eCLIP7.64□□□□□ -1.19
VMP1-204ENST00000587259 TRAF2Q12933 501 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 STX3Q13277 289 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 CTBP1Q13363 440 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 NFATC2Q13469 925 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 QPCTQ16769 361 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 LIPMQ5VYY2 423 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 RAET1GQ6H3X3 334 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 LRRC8EQ6NSJ5 796 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 C6orf89Q6UWU4 347 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 XKR5Q6UX68 686 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 CDHR3Q6ZTQ4 885 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 FAM47EQ6ZV65 393 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 TRPM8Q7Z2W7 1104 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 SLC22A9Q8IVM8 553 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 DENND6AQ8IWF6 608 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 AFAP1L2Q8N4X5 818 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 BMPERQ8N8U9 685 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 AGBL5Q8NDL9 886 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 OR4D9Q8NGE8 314 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 C9orf43Q8TAL5 461 aaPredicted RBP7.64□□□□□ -1.19
VMP1-204ENST00000587259 STON2Q8WXE9 905 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 SCAMP4Q969E2 229 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 MRPL57Q9BQC6 102 aaKnown RBP7.64□□□□□ -1.19
VMP1-204ENST00000587259 TEX101Q9BY14 249 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 GSDMCQ9BYG8 508 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 WWP1Q9H0M0 922 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 CDH19Q9H159 772 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 MRPL46Q9H2W6 279 aaKnown RBP7.64□□□□□ -1.19
VMP1-204ENST00000587259 RABEP2Q9H5N1 569 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 GPN2Q9H9Y4 310 aaPredicted RBP7.64□□□□□ -1.19
VMP1-204ENST00000587259 ZFYVE1Q9HBF4 777 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 GPAMQ9HCL2 828 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 TAS2R13Q9NYV9 303 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 IL1RAPL1Q9NZN1 696 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 AKAP7Q9P0M2 348 aaPredicted RBP7.64□□□□□ -1.19
VMP1-204ENST00000587259 SLC17A6Q9P2U8 582 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 SLC2A6Q9UGQ3 507 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 PILRAQ9UKJ1 303 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 TMCO1Q9UM00 188 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 TP53TG5Q9Y2B4 290 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 MTO1Q9Y2Z2 717 aaKnown RBP7.64□□□□□ -1.19
VMP1-204ENST00000587259 ARL5AQ9Y689 179 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 SLC30A1Q9Y6M5 507 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 NOTCH2Q04721 2471 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 SPTAN1Q13813 2472 aaKnown RBP7.63□□□□□ -1.19
VMP1-204ENST00000587259 CCDC78A2IDD5 438 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 CCDC162PA2VCL2 907 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 WDR91A4D1P6 747 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 CLEC18AA5D8T8 446 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 PRR19A6NJB7 356 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 CCT8L1PA6NM43 557 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 ZNF891A8MT65 544 aaPredicted RBP7.63□□□□□ -1.19
VMP1-204ENST00000587259 SLCO1B7G3V0H7 640 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 GOLGA8TH3BQL2 631 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 HGSO14964 777 aaPredicted RBP7.63□□□□□ -1.19
VMP1-204ENST00000587259 INPP4BO15327 924 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 TRIM13O60858 407 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 SNNO75324 88 aaPredicted RBP7.63□□□□□ -1.19
VMP1-204ENST00000587259 VPS26AO75436 327 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 PRLP01236 227 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 ESR1P03372 595 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 LTA4HP09960 611 aaKnown RBP7.63□□□□□ -1.19
VMP1-204ENST00000587259 RALBP11234 206 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 CYP2A6P11509 494 aaPredicted RBP7.63□□□□□ -1.19
VMP1-204ENST00000587259 ZNF28P17035 718 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 BGNP21810 368 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 KELP23276 732 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 VIPR1P32241 457 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 RASSF2P50749 326 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 IFT88Q13099 833 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 NR1D2Q14995 579 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 PCLAFQ15004 111 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 ACAP2Q15057 778 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 CHI3L2Q15782 390 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 TBCCQ15814 346 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 GPR33Q49SQ1 333 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 C4orf17Q53FE4 359 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 HECTD2Q5U5R9 776 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 CLEC18BQ6UXF7 455 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 ZYG11AQ6WRX3 759 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 OTOAQ7RTW8 1153 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 PIWIL4Q7Z3Z4 852 aaKnown RBP7.63□□□□□ -1.19
VMP1-204ENST00000587259 CMC1Q7Z7K0 106 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 CBARPQ8N350 705 aaPredicted RBP7.63□□□□□ -1.19
VMP1-204ENST00000587259 CLEC18CQ8NCF0 446 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 OR4K2Q8NGD2 314 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 PIWIL2Q8TC59 973 aaKnown RBP7.63□□□□□ -1.19
VMP1-204ENST00000587259 SLC37A2Q8TED4 501 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 NCSTNQ92542 709 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 ULK4Q96C45 1275 aa7.63□□□□□ -1.19
VMP1-204ENST00000587259 DTD2Q96FN9 168 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms