RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 RTCAO00442 366 aaKnown RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 PDXKO00764 312 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 RPS6KA5O75582 802 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 RLN1P04808 185 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 ASGR1P07306 291 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 FCGR2AP12318 317 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 DARSP14868 501 aaKnown RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 PTPN2P17706 415 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 ARF4P18085 180 aaPredicted RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 DNASE1P24855 282 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 PTAFRP25105 342 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 MAGEA11P43364 429 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 LHX1P48742 406 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 TUFMP49411 452 aaKnown RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 ZNF41P51814 821 aaPredicted RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 PTENP60484 403 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 MGAT3Q09327 533 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 NFE2L1Q14494 772 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 STK38Q15208 465 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 MMEL1Q495T6 779 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 XKR4Q5GH76 650 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 ZNF667Q5HYK9 610 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 COLEC12Q5KU26 742 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 PRAMEF17Q5VTA0 474 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 MTFR2Q6P444 385 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 GJB7Q6PEY0 223 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 Q6ZWC4 215 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 TRMT11Q7Z4G4 463 aaKnown RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 CAMKMTQ7Z624 323 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 ZNF677Q86XU0 584 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 TMEM105Q8N8V8 129 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 TERB1Q8NA31 727 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 MLKLQ8NB16 471 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 ENGASEQ8NFI3 743 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 VN1R2Q8NFZ6 395 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 PRCCQ92733 491 aaPredicted RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 SLC22A18Q96BI1 424 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 LRRC45Q96CN5 670 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 NR1H4Q96RI1 486 aaPredicted RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 PRR25Q96S07 402 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 DDOQ99489 341 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 EPYCQ99645 322 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 ADAM2Q99965 735 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 SEMA3CQ99985 751 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 PAAF1Q9BRP4 392 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 MMTAG2Q9BU76 263 aaKnown RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 TUBB6Q9BUF5 446 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 NUP58Q9BVL2 599 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 ZFHX2Q9C0A1 2572 aaPredicted RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 DPP3Q9NY33 737 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 TAS2R14Q9NYV8 317 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 CTTNBP2NLQ9P2B4 639 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 MUTYHQ9UIF7 546 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 SH3BGRL2Q9UJC5 107 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 TECTAO75443 2155 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 GREB1Q4ZG55 1949 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 IGLV3-22A0A075B6J6 115 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 A0A0U1RQF3 1178 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 CXorf65A6NEN9 183 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 KRTAP29-1A8MX34 341 aaPredicted RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 MCIDASD6RGH6 385 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 LIASO43766 372 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 RAD51DO75771 328 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 RGS11O94810 467 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 TNNC2P02585 160 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 MT-ND3P03897 115 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 IL6RP08887 468 aaPredicted RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 IQCF3P0C7M6 154 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 SMIM10L2AP0DMW4 78 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 SMIM10L2BP0DMW5 78 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 SRCP12931 536 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 KRT13P13646 458 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 CD58P19256 250 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 MC5RP33032 325 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 ACSL1P33121 698 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 TCF7P36402 384 aaPredicted RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 ARL2P36404 184 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 GARSP41250 739 aaKnown RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 SUOXP51687 545 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 AIF1P55008 147 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 MYL7Q01449 175 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 CYP4A11Q02928 519 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 CARTPTQ16568 116 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 UGP2Q16851 508 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 ZNF425Q6IV72 752 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 LRRC8EQ6NSJ5 796 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 RPUSD3Q6P087 351 aaKnown RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 GLDNQ6ZMI3 551 aaPredicted RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 INTS8Q75QN2 995 aaKnown RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 ERN2Q76MJ5 926 aaKnown RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 CENPVQ7Z7K6 275 aaPredicted RBP1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 WDR5BQ86VZ2 330 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 LINC00346Q8IVM7 164 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 CLYBLQ8N0X4 340 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 TRPV1Q8NER1 839 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 TBCKQ8TEA7 893 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 CFAP36Q96G28 342 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 SNX18Q96RF0 628 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 MMS19Q96T76 1030 aa1.89□□□□□ -2.11
SMCHD1-211ENST00000584897 EGFL8Q99944 293 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms