RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 KCNJ9Q92806 393 aa19.66■□□□□ 0.74
SS18-224ENST00000584083 INPP5DQ92835 1189 aa19.66■□□□□ 0.74
SS18-224ENST00000584083 CFAP36Q96G28 342 aa19.66■□□□□ 0.74
SS18-224ENST00000584083 SNF8Q96H20 258 aa19.66■□□□□ 0.74
SS18-224ENST00000584083 PWWP2AQ96N64 755 aa19.66■□□□□ 0.74
SS18-224ENST00000584083 GPR21Q99679 349 aa19.66■□□□□ 0.74
SS18-224ENST00000584083 KLHL42Q9P2K6 505 aa19.66■□□□□ 0.74
SS18-224ENST00000584083 POLHQ9Y253 713 aa19.66■□□□□ 0.74
SS18-224ENST00000584083 DHRS7Q9Y394 339 aa19.66■□□□□ 0.74
SS18-224ENST00000584083 ARHGEF33A8MVX0 844 aa19.65■□□□□ 0.74
SS18-224ENST00000584083 B8ZZF3 427 aa19.65■□□□□ 0.74
SS18-224ENST00000584083 VPS26AO75436 327 aa19.65■□□□□ 0.74
SS18-224ENST00000584083 RECKO95980 971 aa19.65■□□□□ 0.74
SS18-224ENST00000584083 AGXTP21549 392 aa19.65■□□□□ 0.74
SS18-224ENST00000584083 ELK3P41970 407 aa19.65■□□□□ 0.74
SS18-224ENST00000584083 HIF1AQ16665 826 aa19.65■□□□□ 0.74
SS18-224ENST00000584083 LCN10Q6JVE6 187 aa19.65■□□□□ 0.74
SS18-224ENST00000584083 HIBCHQ6NVY1 386 aaPredicted RBP19.65■□□□□ 0.74
SS18-224ENST00000584083 FIGLAQ6QHK4 219 aa19.65■□□□□ 0.74
SS18-224ENST00000584083 NEK10Q6ZWH5 1172 aa19.65■□□□□ 0.74
SS18-224ENST00000584083 SYVN1Q86TM6 617 aa19.65■□□□□ 0.74
SS18-224ENST00000584083 ZNF655Q8N720 491 aaPredicted RBP19.65■□□□□ 0.74
SS18-224ENST00000584083 C2CD4AQ8NCU7 369 aaPredicted RBP19.65■□□□□ 0.74
SS18-224ENST00000584083 OR9A1PQ8NGU1 263 aa19.65■□□□□ 0.74
SS18-224ENST00000584083 GIMAP7Q8NHV1 300 aa19.65■□□□□ 0.74
SS18-224ENST00000584083 HMGCLL1Q8TB92 370 aa19.65■□□□□ 0.74
SS18-224ENST00000584083 DENND1AQ8TEH3 1009 aa19.65■□□□□ 0.74
SS18-224ENST00000584083 SEC14L1Q92503 715 aa19.65■□□□□ 0.74
SS18-224ENST00000584083 AARSD1Q9BTE6 412 aaKnown RBP19.65■□□□□ 0.74
SS18-224ENST00000584083 FAM117AQ9C073 453 aa19.65■□□□□ 0.74
SS18-224ENST00000584083 PPANQ9NQ55 473 aaKnown RBP19.65■□□□□ 0.74
SS18-224ENST00000584083 EURLQ9NYK6 297 aa19.65■□□□□ 0.74
SS18-224ENST00000584083 SPATA7Q9P0W8 599 aa19.65■□□□□ 0.74
SS18-224ENST00000584083 CHMP2BQ9UQN3 213 aa19.65■□□□□ 0.74
SS18-224ENST00000584083 EFCAB8A8MWE9 144 aa19.64■□□□□ 0.73
SS18-224ENST00000584083 ZSCAN9O15535 394 aaPredicted RBP19.64■□□□□ 0.73
SS18-224ENST00000584083 PRICKLE3O43900 615 aaPredicted RBP19.64■□□□□ 0.73
SS18-224ENST00000584083 PSIP1O75475 530 aaKnown RBP19.64■□□□□ 0.73
SS18-224ENST00000584083 FKBP9O95302 570 aa19.64■□□□□ 0.73
SS18-224ENST00000584083 CTSBP07858 339 aa19.64■□□□□ 0.73
SS18-224ENST00000584083 ATXN8OSP0DMR3 200 aa19.64■□□□□ 0.73
SS18-224ENST00000584083 PSMB5P28074 263 aa19.64■□□□□ 0.73
SS18-224ENST00000584083 CASQ1P31415 396 aa19.64■□□□□ 0.73
SS18-224ENST00000584083 GRIA3P42263 894 aa19.64■□□□□ 0.73
SS18-224ENST00000584083 CARSP49589 748 aaKnown RBP19.64■□□□□ 0.73
SS18-224ENST00000584083 ARL4CP56559 192 aa19.64■□□□□ 0.73
SS18-224ENST00000584083 CYP2A13Q16696 494 aa19.64■□□□□ 0.73
SS18-224ENST00000584083 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.64■□□□□ 0.73
SS18-224ENST00000584083 TLDC1Q6P9B6 456 aa19.64■□□□□ 0.73
SS18-224ENST00000584083 MCATQ8IVS2 390 aaKnown RBP19.64■□□□□ 0.73
SS18-224ENST00000584083 SPNS2Q8IVW8 549 aa19.64■□□□□ 0.73
SS18-224ENST00000584083 ENDOVQ8N8Q3 282 aaKnown RBP19.64■□□□□ 0.73
SS18-224ENST00000584083 CERS2Q96G23 380 aa19.64■□□□□ 0.73
SS18-224ENST00000584083 MIPEPQ99797 713 aa19.64■□□□□ 0.73
SS18-224ENST00000584083 DPH2Q9BQC3 489 aaPredicted RBP19.64■□□□□ 0.73
SS18-224ENST00000584083 NLNQ9BYT8 704 aa19.64■□□□□ 0.73
SS18-224ENST00000584083 SLC25A18Q9H1K4 315 aa19.64■□□□□ 0.73
SS18-224ENST00000584083 STARD5Q9NSY2 213 aa19.64■□□□□ 0.73
SS18-224ENST00000584083 TXLNGQ9NUQ3 528 aa19.64■□□□□ 0.73
SS18-224ENST00000584083 ZC3H7BQ9UGR2 993 aaKnown RBP19.64■□□□□ 0.73
SS18-224ENST00000584083 MED16Q9Y2X0 877 aa19.64■□□□□ 0.73
SS18-224ENST00000584083 KCNMB2Q9Y691 235 aa19.64■□□□□ 0.73
SS18-224ENST00000584083 CCDC88CQ9P219 2028 aa19.64■□□□□ 0.73
SS18-224ENST00000584083 CFAP46Q8IYW2 2715 aa19.64■□□□□ 0.73
SS18-224ENST00000584083 FER1L5A0AVI2 2057 aa19.63■□□□□ 0.73
SS18-224ENST00000584083 C9J4A7 227 aa19.63■□□□□ 0.73
SS18-224ENST00000584083 SEC31AO94979 1220 aaKnown RBP19.63■□□□□ 0.73
SS18-224ENST00000584083 RAB40ALP0C0E4 278 aa19.63■□□□□ 0.73
SS18-224ENST00000584083 MPC1LP0DKB6 136 aa19.63■□□□□ 0.73
SS18-224ENST00000584083 ENO3P13929 434 aaPredicted RBP19.63■□□□□ 0.73
SS18-224ENST00000584083 TSTA3Q13630 321 aaPredicted RBP19.63■□□□□ 0.73
SS18-224ENST00000584083 FASTKQ14296 549 aaKnown RBP19.63■□□□□ 0.73
SS18-224ENST00000584083 ZC3H12BQ5HYM0 836 aaKnown RBP19.63■□□□□ 0.73
SS18-224ENST00000584083 C1orf189Q5VU69 101 aa19.63■□□□□ 0.73
SS18-224ENST00000584083 FCRL6Q6DN72 434 aa19.63■□□□□ 0.73
SS18-224ENST00000584083 UGT3A1Q6NUS8 523 aa19.63■□□□□ 0.73
SS18-224ENST00000584083 CPNE9Q8IYJ1 553 aa19.63■□□□□ 0.73
SS18-224ENST00000584083 CD200R1Q8TD46 325 aa19.63■□□□□ 0.73
SS18-224ENST00000584083 ZUFSPQ96AP4 578 aa19.63■□□□□ 0.73
SS18-224ENST00000584083 LRRC39Q96DD0 335 aa19.63■□□□□ 0.73
SS18-224ENST00000584083 NDNQ99608 321 aa19.63■□□□□ 0.73
SS18-224ENST00000584083 NDC1Q9BTX1 674 aa19.63■□□□□ 0.73
SS18-224ENST00000584083 TRMT6Q9UJA5 497 aaKnown RBP19.63■□□□□ 0.73
SS18-224ENST00000584083 TUBD1Q9UJT1 453 aa19.63■□□□□ 0.73
SS18-224ENST00000584083 SNX7Q9UNH6 387 aa19.63■□□□□ 0.73
SS18-224ENST00000584083 SRPK3Q9UPE1 567 aa19.63■□□□□ 0.73
SS18-224ENST00000584083 MAN2B2Q9Y2E5 1009 aa19.63■□□□□ 0.73
SS18-224ENST00000584083 HEMK1Q9Y5R4 338 aaPredicted RBP19.63■□□□□ 0.73
SS18-224ENST00000584083 ANKRD12Q6UB98 2062 aa19.63■□□□□ 0.73
SS18-224ENST00000584083 H3BMH7 237 aa19.62■□□□□ 0.73
SS18-224ENST00000584083 MYO1CO00159 1063 aa19.62■□□□□ 0.73
SS18-224ENST00000584083 SYF2O95926 243 aaKnown RBP19.62■□□□□ 0.73
SS18-224ENST00000584083 CBSLP0DN79 551 aa19.62■□□□□ 0.73
SS18-224ENST00000584083 MCM3P25205 808 aa19.62■□□□□ 0.73
SS18-224ENST00000584083 CBSP35520 551 aa19.62■□□□□ 0.73
SS18-224ENST00000584083 MRPS25P82663 173 aaKnown RBP19.62■□□□□ 0.73
SS18-224ENST00000584083 UGT8Q16880 541 aa19.62■□□□□ 0.73
SS18-224ENST00000584083 RHBDD2Q6NTF9 364 aa19.62■□□□□ 0.73
SS18-224ENST00000584083 FAM198BQ6UWH4 519 aa19.62■□□□□ 0.73
SS18-224ENST00000584083 ANKMY2Q8IV38 441 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms