RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 UBTD2Q8WUN7 234 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 ATL1Q8WXF7 558 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 CCDC74AQ96AQ1 378 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 PYCR2Q96C36 320 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 MOCOSQ96EN8 888 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 CNDP2Q96KP4 475 aaKnown RBP9.23□□□□□ -0.93
RFFL-210ENST00000582308 TMEM237Q96Q45 408 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 SLC38A3Q99624 504 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 PAIP2Q9BPZ3 127 aaKnown RBP9.23□□□□□ -0.93
RFFL-210ENST00000582308 SGPP1Q9BX95 441 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 RAB11FIP5Q9BXF6 653 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 CD244Q9BZW8 370 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 SRMSQ9H3Y6 488 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 STN1Q9H668 368 aaKnown RBP9.23□□□□□ -0.93
RFFL-210ENST00000582308 CNOT10Q9H9A5 744 aaKnown RBP9.23□□□□□ -0.93
RFFL-210ENST00000582308 INTS7Q9NVH2 962 aaKnown RBP9.23□□□□□ -0.93
RFFL-210ENST00000582308 SPHK1Q9NYA1 384 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 WWOXQ9NZC7 414 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 OR6C2Q9NZP2 312 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 NCKIPSDQ9NZQ3 722 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 OGFRQ9NZT2 677 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 MID2Q9UJV3 735 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 SPTBP11277 2137 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 KIF26BQ2KJY2 2108 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 KNTC1P50748 2209 aa9.23□□□□□ -0.93
RFFL-210ENST00000582308 COL27A1Q8IZC6 1860 aaPredicted RBP9.22□□□□□ -0.93
RFFL-210ENST00000582308 CASC3O15234 703 aaKnown RBP9.22□□□□□ -0.93
RFFL-210ENST00000582308 BIRC5O15392 142 aa9.22□□□□□ -0.93
RFFL-210ENST00000582308 KDM1AO60341 852 aa9.22□□□□□ -0.93
RFFL-210ENST00000582308 TRIM13O60858 407 aa9.22□□□□□ -0.93
RFFL-210ENST00000582308 UBXN7O94888 489 aa9.22□□□□□ -0.93
RFFL-210ENST00000582308 LDOC1O95751 146 aaPredicted RBP9.22□□□□□ -0.93
RFFL-210ENST00000582308 CHRM5P08912 532 aaPredicted RBP9.22□□□□□ -0.93
RFFL-210ENST00000582308 FGF3P11487 239 aaPredicted RBP9.22□□□□□ -0.93
RFFL-210ENST00000582308 PNLIPP16233 465 aa9.22□□□□□ -0.93
RFFL-210ENST00000582308 POLR2CP19387 275 aaPredicted RBP9.22□□□□□ -0.93
RFFL-210ENST00000582308 IMPDH1P20839 514 aa9.22□□□□□ -0.93
RFFL-210ENST00000582308 EEF1DP29692 281 aaKnown RBP9.22□□□□□ -0.93
RFFL-210ENST00000582308 OAS2P29728 719 aaKnown RBP9.22□□□□□ -0.93
RFFL-210ENST00000582308 ALDH4A1P30038 563 aa9.22□□□□□ -0.93
RFFL-210ENST00000582308 PEBP1P30086 187 aaKnown RBP9.22□□□□□ -0.93
RFFL-210ENST00000582308 NAGLUP54802 743 aa9.22□□□□□ -0.93
RFFL-210ENST00000582308 HERVK_113P63132 956 aa9.22□□□□□ -0.93
RFFL-210ENST00000582308 PCBP2Q15366 365 aaKnown RBP eCLIP9.22□□□□□ -0.93
RFFL-210ENST00000582308 UNC50Q53HI1 259 aa9.22□□□□□ -0.93
RFFL-210ENST00000582308 ZNF678Q5SXM1 525 aa9.22□□□□□ -0.93
RFFL-210ENST00000582308 LIPMQ5VYY2 423 aa9.22□□□□□ -0.93
RFFL-210ENST00000582308 CES4AQ5XG92 561 aa9.22□□□□□ -0.93
RFFL-210ENST00000582308 RPS27LQ71UM5 84 aaKnown RBP9.22□□□□□ -0.93
RFFL-210ENST00000582308 EFL1Q7Z2Z2 1120 aaKnown RBP9.22□□□□□ -0.93
RFFL-210ENST00000582308 PIP4P1Q86T03 277 aa9.22□□□□□ -0.93
RFFL-210ENST00000582308 TAX1BP1Q86VP1 789 aa9.22□□□□□ -0.93
RFFL-210ENST00000582308 NUDCD3Q8IVD9 361 aa9.22□□□□□ -0.93
RFFL-210ENST00000582308 RAB42Q8N4Z0 105 aa9.22□□□□□ -0.93
RFFL-210ENST00000582308 Q8N9G6 341 aaPredicted RBP9.22□□□□□ -0.93
RFFL-210ENST00000582308 OR6C4Q8NGE1 309 aa9.22□□□□□ -0.93
RFFL-210ENST00000582308 OR6Y1Q8NGX8 325 aa9.22□□□□□ -0.93
RFFL-210ENST00000582308 FLVCR1-AS1Q8TAF5 88 aa9.22□□□□□ -0.93
RFFL-210ENST00000582308 BAHD1Q8TBE0 780 aaPredicted RBP9.22□□□□□ -0.93
RFFL-210ENST00000582308 SMPDL3AQ92484 453 aa9.22□□□□□ -0.93
RFFL-210ENST00000582308 RSC1A1Q92681 617 aa9.22□□□□□ -0.93
RFFL-210ENST00000582308 CCDC126Q96EE4 140 aa9.22□□□□□ -0.93
RFFL-210ENST00000582308 L3HYPDHQ96EM0 354 aa9.22□□□□□ -0.93
RFFL-210ENST00000582308 MED8Q96G25 268 aa9.22□□□□□ -0.93
RFFL-210ENST00000582308 NSUN5Q96P11 429 aaKnown RBP9.22□□□□□ -0.93
RFFL-210ENST00000582308 OR4K3Q96R72 315 aa9.22□□□□□ -0.93
RFFL-210ENST00000582308 GATA5Q9BWX5 397 aaPredicted RBP9.22□□□□□ -0.93
RFFL-210ENST00000582308 C1QTNF3Q9BXJ4 246 aa9.22□□□□□ -0.93
RFFL-210ENST00000582308 ERVK-6Q9BXR3 956 aa9.22□□□□□ -0.93
RFFL-210ENST00000582308 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.22□□□□□ -0.93
RFFL-210ENST00000582308 PITPNM3Q9BZ71 974 aa9.22□□□□□ -0.93
RFFL-210ENST00000582308 TNPO3Q9Y5L0 923 aaKnown RBP9.22□□□□□ -0.93
RFFL-210ENST00000582308 IGHV1OR21-1A0A087WYE8 117 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.21□□□□□ -0.94
RFFL-210ENST00000582308 PIPSLA2A3N6 862 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 FAM221BA6H8Z2 402 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 OR5K3A6NET4 321 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 ZNF839A8K0R7 811 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 K7EPI3 171 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 E2F3O00716 465 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 CCNT2O60583 730 aaKnown RBP9.21□□□□□ -0.94
RFFL-210ENST00000582308 STK16O75716 305 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 WDR47O94967 919 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 PROS1P07225 676 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 RPS17P08708 135 aaKnown RBP9.21□□□□□ -0.94
RFFL-210ENST00000582308 NPPBP16860 134 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 CKMT2P17540 419 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 AMD1P17707 334 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 EPORP19235 508 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 PSMB5P28074 263 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 CD1CP29017 333 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 DUSP3P51452 185 aaPredicted RBP9.21□□□□□ -0.94
RFFL-210ENST00000582308 EPHA4P54764 986 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 PPP1CAP62136 330 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 TBPL1P62380 186 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 YBX1P67809 324 aaKnown RBP9.21□□□□□ -0.94
RFFL-210ENST00000582308 CCL7P80098 99 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 DAB2P98082 770 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 CFHR1Q03591 330 aa9.21□□□□□ -0.94
RFFL-210ENST00000582308 TSTA3Q13630 321 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms