RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 LNPEPQ9UIQ6 1025 aa15.03■□□□□ -0
SS18-216ENST00000580751 PLAGL1Q9UM63 463 aa15.03■□□□□ -0
SS18-216ENST00000580751 ENTPD2Q9Y5L3 495 aa15.03■□□□□ -0
SS18-216ENST00000580751 ZNF839A8K0R7 811 aa15.02■□□□□ -0
SS18-216ENST00000580751 C2orf74A8MZ97 194 aa15.02■□□□□ -0
SS18-216ENST00000580751 TARM1B6A8C7 271 aa15.02■□□□□ -0
SS18-216ENST00000580751 BTN3A1O00481 513 aa15.02■□□□□ -0
SS18-216ENST00000580751 POLR3GO15318 223 aaPredicted RBP15.02■□□□□ -0
SS18-216ENST00000580751 CAPN5O15484 640 aaPredicted RBP15.02■□□□□ -0
SS18-216ENST00000580751 H2AFYO75367 372 aaKnown RBP15.02■□□□□ -0
SS18-216ENST00000580751 CSO75390 466 aaKnown RBP15.02■□□□□ -0
SS18-216ENST00000580751 C9P02748 559 aa15.02■□□□□ -0
SS18-216ENST00000580751 HIST1H2AGP0C0S8 130 aaPredicted RBP15.02■□□□□ -0
SS18-216ENST00000580751 TPBGLP0DKB5 382 aa15.02■□□□□ -0
SS18-216ENST00000580751 THRAP10827 490 aa15.02■□□□□ -0
SS18-216ENST00000580751 TAC1P20366 129 aa15.02■□□□□ -0
SS18-216ENST00000580751 HIST1H2ADP20671 130 aa15.02■□□□□ -0
SS18-216ENST00000580751 CCKBRP32239 447 aa15.02■□□□□ -0
SS18-216ENST00000580751 HSD17B2P37059 387 aa15.02■□□□□ -0
SS18-216ENST00000580751 SERPINB4P48594 390 aa15.02■□□□□ -0
SS18-216ENST00000580751 ATP1A2P50993 1020 aa15.02■□□□□ -0
SS18-216ENST00000580751 PDX1P52945 283 aa15.02■□□□□ -0
SS18-216ENST00000580751 INHBCP55103 352 aa15.02■□□□□ -0
SS18-216ENST00000580751 AP1S2P56377 157 aa15.02■□□□□ -0
SS18-216ENST00000580751 WDR4P57081 412 aaKnown RBP15.02■□□□□ -0
SS18-216ENST00000580751 NAA20P61599 178 aa15.02■□□□□ -0
SS18-216ENST00000580751 IRF9Q00978 393 aa15.02■□□□□ -0
SS18-216ENST00000580751 CFHR1Q03591 330 aa15.02■□□□□ -0
SS18-216ENST00000580751 TRA2AQ13595 282 aaKnown RBP eCLIP15.02■□□□□ -0
SS18-216ENST00000580751 ARHGAP19Q14CB8 494 aa15.02■□□□□ -0
SS18-216ENST00000580751 ISXQ2M1V0 245 aa15.02■□□□□ -0
SS18-216ENST00000580751 CCSMST1Q4G0I0 132 aa15.02■□□□□ -0
SS18-216ENST00000580751 CDKL4Q5MAI5 379 aa15.02■□□□□ -0
SS18-216ENST00000580751 ANKS6Q68DC2 871 aa15.02■□□□□ -0
SS18-216ENST00000580751 IRGCQ6NXR0 463 aa15.02■□□□□ -0
SS18-216ENST00000580751 ERMP1Q7Z2K6 904 aa15.02■□□□□ -0
SS18-216ENST00000580751 ADAMTSL2Q86TH1 951 aa15.02■□□□□ -0
SS18-216ENST00000580751 SPNS2Q8IVW8 549 aa15.02■□□□□ -0
SS18-216ENST00000580751 SLITRK4Q8IW52 837 aa15.02■□□□□ -0
SS18-216ENST00000580751 OR2L8Q8NGY9 312 aa15.02■□□□□ -0
SS18-216ENST00000580751 MDM1Q8TC05 714 aa15.02■□□□□ -0
SS18-216ENST00000580751 DYDC1Q8WWB3 177 aa15.02■□□□□ -0
SS18-216ENST00000580751 HIST1H2AHQ96KK5 128 aa15.02■□□□□ -0
SS18-216ENST00000580751 CD180Q99467 661 aa15.02■□□□□ -0
SS18-216ENST00000580751 HIST1H2AJQ99878 128 aa15.02■□□□□ -0
SS18-216ENST00000580751 H2AFJQ9BTM1 129 aa15.02■□□□□ -0
SS18-216ENST00000580751 MENTQ9BUN1 341 aa15.02■□□□□ -0
SS18-216ENST00000580751 TRIM54Q9BYV2 358 aa15.02■□□□□ -0
SS18-216ENST00000580751 STRADBQ9C0K7 418 aa15.02■□□□□ -0
SS18-216ENST00000580751 XKR8Q9H6D3 395 aa15.02■□□□□ -0
SS18-216ENST00000580751 COPG2Q9UBF2 871 aa15.02■□□□□ -0
SS18-216ENST00000580751 ADAM21Q9UKJ8 722 aa15.02■□□□□ -0
SS18-216ENST00000580751 EMCNQ9ULC0 261 aa15.02■□□□□ -0
SS18-216ENST00000580751 COL27A1Q8IZC6 1860 aaPredicted RBP15.01□□□□□ -0.01
SS18-216ENST00000580751 IGHV5-10-1A0A0J9YXX1 117 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 PIPSLA2A3N6 862 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 GSAPA4D1B5 854 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 BTN3A3O00478 584 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 KLF11O14901 512 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 TOX3O15405 576 aaPredicted RBP15.01□□□□□ -0.01
SS18-216ENST00000580751 HYAL3O43820 417 aaPredicted RBP15.01□□□□□ -0.01
SS18-216ENST00000580751 KERAO60938 352 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 SNUPNO95149 360 aaKnown RBP15.01□□□□□ -0.01
SS18-216ENST00000580751 BPGMP07738 259 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 ADRB1P08588 477 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 CHRM5P08912 532 aaPredicted RBP15.01□□□□□ -0.01
SS18-216ENST00000580751 HOXB3P14651 431 aaPredicted RBP15.01□□□□□ -0.01
SS18-216ENST00000580751 CPA3P15088 417 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 POLR2CP19387 275 aaPredicted RBP15.01□□□□□ -0.01
SS18-216ENST00000580751 GFERP55789 205 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 CLDN6P56747 220 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 ZFP36L1Q07352 338 aaKnown RBP15.01□□□□□ -0.01
SS18-216ENST00000580751 DLG1Q12959 904 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 PDK4Q16654 411 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 TECRLQ5HYJ1 363 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 PHF19Q5T6S3 580 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 ZYG11AQ6WRX3 759 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 TMPRSS9Q7Z410 1059 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 SLC22A9Q8IVM8 553 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 ADGRF3Q8IZF5 1079 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 CARFQ8N187 725 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 TMEM151AQ8N4L1 468 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 ARMC2Q8NEN0 867 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 HMGCLL1Q8TB92 370 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 CKAP2Q8WWK9 683 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 MAGEB18Q96M61 343 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 TGM7Q96PF1 710 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 PKP4Q99569 1192 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 CAPS2Q9BXY5 557 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 PDP2Q9P2J9 529 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 SLC17A7Q9P2U7 560 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 CIDEBQ9UHD4 219 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 ADAMTS6Q9UKP5 1117 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 POMT2Q9UKY4 750 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 PDE10AQ9Y233 779 aa15.01□□□□□ -0.01
SS18-216ENST00000580751 NPEPPSL1A6NEC2 478 aa15□□□□□ -0.01
SS18-216ENST00000580751 HGSO14964 777 aaPredicted RBP15□□□□□ -0.01
SS18-216ENST00000580751 ANKRD34CP0C6C1 535 aa15□□□□□ -0.01
SS18-216ENST00000580751 ERGP11308 486 aa15□□□□□ -0.01
SS18-216ENST00000580751 TFEBP19484 476 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms