RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 TRPT1Q86TN4 253 aaKnown RBP2.33□□□□□ -2.04
COPS3-213ENST00000577210 TLK2Q86UE8 772 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 FOXP4Q8IVH2 680 aaPredicted RBP2.33□□□□□ -2.04
COPS3-213ENST00000577210 FAM114A1Q8IWE2 563 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 THNSL1Q8IYQ7 743 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 CCDC170Q8IYT3 715 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 CRYBG2Q8N1P7 616 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 NPEPL1Q8NDH3 523 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 AFAP1L1Q8TED9 768 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 ZFAND2BQ8WV99 257 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 KCNE4Q8WWG9 221 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 SUSD6Q92537 303 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 EXT2Q93063 718 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 SPSB1Q96BD6 273 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 GIMAP5Q96F15 307 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 LMLNQ96KR4 655 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 LINC00615Q96LM1 132 aaPredicted RBP2.33□□□□□ -2.04
COPS3-213ENST00000577210 NODALQ96S42 347 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 RAD9AQ99638 391 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 CITED2Q99967 270 aaPredicted RBP2.33□□□□□ -2.04
COPS3-213ENST00000577210 URM1Q9BTM9 101 aaKnown RBP2.33□□□□□ -2.04
COPS3-213ENST00000577210 TRAF4Q9BUZ4 470 aaPredicted RBP2.33□□□□□ -2.04
COPS3-213ENST00000577210 PRRG4Q9BZD6 226 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 BARHL1Q9BZE3 327 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 CPVLQ9H3G5 476 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 MMADHCQ9H3L0 296 aaPredicted RBP2.33□□□□□ -2.04
COPS3-213ENST00000577210 FN3KQ9H479 309 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 TBC1D17Q9HA65 648 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 ZNF701Q9NV72 531 aaPredicted RBP2.33□□□□□ -2.04
COPS3-213ENST00000577210 ZNF624Q9P2J8 865 aaPredicted RBP2.33□□□□□ -2.04
COPS3-213ENST00000577210 CACNG4Q9UBN1 327 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 LRP12Q9Y561 859 aa2.33□□□□□ -2.04
COPS3-213ENST00000577210 A0A087WV48 116 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 TRAV24A0A0B4J272 114 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 TRAV34A0A0B4J273 112 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 LOC101059948A0A1B0GTJ6 334 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 DUXAA6NLW8 204 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 H0Y626 953 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 PLOD2O00469 737 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 PSMD14O00487 310 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 ARPC2O15144 300 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 RPS6KA5O75582 802 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 DFFBO76075 338 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 SIX3O95343 332 aaPredicted RBP2.32□□□□□ -2.04
COPS3-213ENST00000577210 MOCS3O95396 460 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 CLPTM1O96005 669 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 IGKV3-20P01619 116 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 SP1P08047 785 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 HSPA8P11142 646 aaKnown RBP2.32□□□□□ -2.04
COPS3-213ENST00000577210 EPCAMP16422 314 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 PTPN3P26045 913 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 CSTF2P33240 577 aaKnown RBP eCLIP2.32□□□□□ -2.04
COPS3-213ENST00000577210 CETN2P41208 172 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 PRKCIP41743 596 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 CCR10P46092 362 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 MAPK12P53778 367 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 NAGLUP54802 743 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 KRT83P78385 493 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 DLK1P80370 383 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 RBP5P82980 135 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 MAT1AQ00266 395 aaKnown RBP2.32□□□□□ -2.04
COPS3-213ENST00000577210 C17orf67Q0P5P2 114 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 ILF2Q12905 390 aaKnown RBP2.32□□□□□ -2.04
COPS3-213ENST00000577210 BFSP1Q12934 665 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 PRKAA1Q13131 559 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 GPR17Q13304 367 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 PPIGQ13427 754 aaKnown RBP eCLIP2.32□□□□□ -2.04
COPS3-213ENST00000577210 MCMDC2Q4G0Z9 681 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 ZC2HC1CQ53FD0 456 aaPredicted RBP2.32□□□□□ -2.04
COPS3-213ENST00000577210 FAM76BQ5HYJ3 339 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 SLC35D3Q5M8T2 416 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 C6orf136Q5SQH8 315 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 LCN1P1Q5VSP4 162 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 TRAT1Q6PIZ9 186 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 RBMS3Q6XE24 437 aaKnown RBP2.32□□□□□ -2.04
COPS3-213ENST00000577210 ZNF771Q7L3S4 317 aaPredicted RBP2.32□□□□□ -2.04
COPS3-213ENST00000577210 SPATA21Q7Z572 469 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 SMIM29Q86T20 159 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 ZSCAN30Q86W11 494 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 AMIGO1Q86WK6 493 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 ZNF595Q8IYB9 648 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 CEP57L1Q8IYX8 460 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 CDK20Q8IZL9 346 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 SIX6OS1Q8N1H7 587 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 ARHGAP24Q8N264 748 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 DNAJC22Q8N4W6 341 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 THAP8Q8NA92 274 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 KBTBD3Q8NAB2 608 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 OR13C3Q8NGS6 347 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 OR13J1Q8NGT2 312 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 OR52N5Q8NH56 324 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 GDAP1Q8TB36 358 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 HCAR2Q8TDS4 363 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 GRK7Q8WTQ7 553 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 DEPDC1BQ8WUY9 529 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 SNX21Q969T3 373 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 THOC1Q96FV9 657 aaKnown RBP2.32□□□□□ -2.04
COPS3-213ENST00000577210 ZNF558Q96NG5 402 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 F2RL3Q96RI0 385 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 OLFM1Q99784 485 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms