RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 MGAT5Q09328 741 aa14.7□□□□□ -0.06
SMG6-220ENST00000576218 DNASE1L3Q13609 305 aa14.7□□□□□ -0.06
SMG6-220ENST00000576218 GRB7Q14451 532 aa14.7□□□□□ -0.06
SMG6-220ENST00000576218 GBX1Q14549 363 aa14.7□□□□□ -0.06
SMG6-220ENST00000576218 NAA25Q14CX7 972 aa14.7□□□□□ -0.06
SMG6-220ENST00000576218 FASTKD3Q14CZ7 662 aaKnown RBP14.7□□□□□ -0.06
SMG6-220ENST00000576218 WHAMMP3Q1A5X7 153 aa14.7□□□□□ -0.06
SMG6-220ENST00000576218 ZC3H12BQ5HYM0 836 aaKnown RBP14.7□□□□□ -0.06
SMG6-220ENST00000576218 TEDDM1Q5T9Z0 273 aa14.7□□□□□ -0.06
SMG6-220ENST00000576218 THEMIS2Q5TEJ8 643 aa14.7□□□□□ -0.06
SMG6-220ENST00000576218 PRAMEF17Q5VTA0 474 aa14.7□□□□□ -0.06
SMG6-220ENST00000576218 STEAP4Q687X5 459 aa14.7□□□□□ -0.06
SMG6-220ENST00000576218 FAM45BPQ6NSW5 357 aa14.7□□□□□ -0.06
SMG6-220ENST00000576218 TRMT10BQ6PF06 316 aaKnown RBP14.7□□□□□ -0.06
SMG6-220ENST00000576218 UBE2R2Q712K3 238 aaPredicted RBP14.7□□□□□ -0.06
SMG6-220ENST00000576218 PIWIL4Q7Z3Z4 852 aaKnown RBP14.7□□□□□ -0.06
SMG6-220ENST00000576218 CNTN4Q8IWV2 1026 aa14.7□□□□□ -0.06
SMG6-220ENST00000576218 FAM45AQ8TCE6 357 aa14.7□□□□□ -0.06
SMG6-220ENST00000576218 CT55Q8WUE5 264 aa14.7□□□□□ -0.06
SMG6-220ENST00000576218 CDKL2Q92772 493 aa14.7□□□□□ -0.06
SMG6-220ENST00000576218 EXTL1Q92935 676 aa14.7□□□□□ -0.06
SMG6-220ENST00000576218 ACAT2Q9BWD1 397 aa14.7□□□□□ -0.06
SMG6-220ENST00000576218 NSMCE4AQ9NXX6 385 aa14.7□□□□□ -0.06
SMG6-220ENST00000576218 IL17BQ9UHF5 180 aa14.7□□□□□ -0.06
SMG6-220ENST00000576218 CORO1CQ9ULV4 474 aaPredicted RBP14.7□□□□□ -0.06
SMG6-220ENST00000576218 PLCL2Q9UPR0 1127 aa14.7□□□□□ -0.06
SMG6-220ENST00000576218 MRPS18BQ9Y676 258 aaKnown RBP14.7□□□□□ -0.06
SMG6-220ENST00000576218 ZFHX4Q86UP3 3567 aa14.69□□□□□ -0.06
SMG6-220ENST00000576218 C21orf140B9A014 251 aa14.69□□□□□ -0.06
SMG6-220ENST00000576218 C9J4A7 227 aa14.69□□□□□ -0.06
SMG6-220ENST00000576218 KIF2AO00139 706 aaPredicted RBP14.69□□□□□ -0.06
SMG6-220ENST00000576218 EIF3FO00303 357 aaPredicted RBP14.69□□□□□ -0.06
SMG6-220ENST00000576218 NKX2-8O15522 239 aa14.69□□□□□ -0.06
SMG6-220ENST00000576218 ZSCAN9O15535 394 aaPredicted RBP14.69□□□□□ -0.06
SMG6-220ENST00000576218 ZNF749O43361 778 aa14.69□□□□□ -0.06
SMG6-220ENST00000576218 FKBP9O95302 570 aa14.69□□□□□ -0.06
SMG6-220ENST00000576218 AHSGP02765 367 aa14.69□□□□□ -0.06
SMG6-220ENST00000576218 ITGB2P05107 769 aa14.69□□□□□ -0.06
SMG6-220ENST00000576218 MSL3P1P0C860 447 aa14.69□□□□□ -0.06
SMG6-220ENST00000576218 AGXTP21549 392 aa14.69□□□□□ -0.06
SMG6-220ENST00000576218 PSMB5P28074 263 aa14.69□□□□□ -0.06
SMG6-220ENST00000576218 PNLIPRP1P54315 467 aa14.69□□□□□ -0.06
SMG6-220ENST00000576218 CDC20Q12834 499 aa14.69□□□□□ -0.06
SMG6-220ENST00000576218 ZIC1Q15915 447 aa14.69□□□□□ -0.06
SMG6-220ENST00000576218 SOWAHCQ53LP3 525 aaPredicted RBP14.69□□□□□ -0.06
SMG6-220ENST00000576218 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.69□□□□□ -0.06
SMG6-220ENST00000576218 RBM20Q5T481 1227 aaKnown RBP14.69□□□□□ -0.06
SMG6-220ENST00000576218 FAM199XQ6PEV8 388 aaPredicted RBP14.69□□□□□ -0.06
SMG6-220ENST00000576218 FIGLAQ6QHK4 219 aa14.69□□□□□ -0.06
SMG6-220ENST00000576218 STRA8Q7Z7C7 330 aa14.69□□□□□ -0.06
SMG6-220ENST00000576218 MNS1Q8NEH6 495 aa14.69□□□□□ -0.06
SMG6-220ENST00000576218 MCOLN3Q8TDD5 553 aa14.69□□□□□ -0.06
SMG6-220ENST00000576218 SMPDL3AQ92484 453 aa14.69□□□□□ -0.06
SMG6-220ENST00000576218 LINGO1Q96FE5 620 aa14.69□□□□□ -0.06
SMG6-220ENST00000576218 CATSPER2Q96P56 530 aa14.69□□□□□ -0.06
SMG6-220ENST00000576218 PKP4Q99569 1192 aa14.69□□□□□ -0.06
SMG6-220ENST00000576218 NDC1Q9BTX1 674 aa14.69□□□□□ -0.06
SMG6-220ENST00000576218 MENTQ9BUN1 341 aa14.69□□□□□ -0.06
SMG6-220ENST00000576218 SLC12A9Q9BXP2 914 aa14.69□□□□□ -0.06
SMG6-220ENST00000576218 TWSG1Q9GZX9 223 aa14.69□□□□□ -0.06
SMG6-220ENST00000576218 FAM60AQ9NP50 221 aa14.69□□□□□ -0.06
SMG6-220ENST00000576218 AP1M2Q9Y6Q5 423 aa14.69□□□□□ -0.06
SMG6-220ENST00000576218 CACNA1GO43497 2377 aa14.69□□□□□ -0.06
SMG6-220ENST00000576218 IGSF10Q6WRI0 2623 aa14.68□□□□□ -0.06
SMG6-220ENST00000576218 CDC14CA4D256 554 aa14.68□□□□□ -0.06
SMG6-220ENST00000576218 E7ESA3 106 aa14.68□□□□□ -0.06
SMG6-220ENST00000576218 MYO1CO00159 1063 aa14.68□□□□□ -0.06
SMG6-220ENST00000576218 MEN1O00255 615 aa14.68□□□□□ -0.06
SMG6-220ENST00000576218 EIF3HO15372 352 aaKnown RBP eCLIP14.68□□□□□ -0.06
SMG6-220ENST00000576218 CCNDBP1O95273 360 aa14.68□□□□□ -0.06
SMG6-220ENST00000576218 HIST1H2AGP0C0S8 130 aaPredicted RBP14.68□□□□□ -0.06
SMG6-220ENST00000576218 HIST1H2ADP20671 130 aa14.68□□□□□ -0.06
SMG6-220ENST00000576218 SLC12A2P55011 1212 aa14.68□□□□□ -0.06
SMG6-220ENST00000576218 CDKN2DP55273 166 aa14.68□□□□□ -0.06
SMG6-220ENST00000576218 IL2P60568 153 aa14.68□□□□□ -0.06
SMG6-220ENST00000576218 GPS2Q13227 327 aa14.68□□□□□ -0.06
SMG6-220ENST00000576218 LY6DQ14210 128 aa14.68□□□□□ -0.06
SMG6-220ENST00000576218 ERV3-1Q14264 604 aa14.68□□□□□ -0.06
SMG6-220ENST00000576218 ARHGAP19Q14CB8 494 aa14.68□□□□□ -0.06
SMG6-220ENST00000576218 HECTD2Q5U5R9 776 aa14.68□□□□□ -0.06
SMG6-220ENST00000576218 DUPD1Q68J44 220 aa14.68□□□□□ -0.06
SMG6-220ENST00000576218 TLDC1Q6P9B6 456 aa14.68□□□□□ -0.06
SMG6-220ENST00000576218 BORAQ6PGQ7 559 aa14.68□□□□□ -0.06
SMG6-220ENST00000576218 SUSD1Q6UWL2 747 aa14.68□□□□□ -0.06
SMG6-220ENST00000576218 ADCK2Q7Z695 626 aa14.68□□□□□ -0.06
SMG6-220ENST00000576218 GALNT7Q86SF2 657 aa14.68□□□□□ -0.06
SMG6-220ENST00000576218 ZNF655Q8N720 491 aaPredicted RBP14.68□□□□□ -0.06
SMG6-220ENST00000576218 TTC29Q8NA56 475 aaPredicted RBP14.68□□□□□ -0.06
SMG6-220ENST00000576218 LSM14AQ8ND56 463 aaKnown RBP14.68□□□□□ -0.06
SMG6-220ENST00000576218 FLVCR1-AS1Q8TAF5 88 aa14.68□□□□□ -0.06
SMG6-220ENST00000576218 HMGCLL1Q8TB92 370 aa14.68□□□□□ -0.06
SMG6-220ENST00000576218 TTC9Q92623 222 aa14.68□□□□□ -0.06
SMG6-220ENST00000576218 HIST1H2AHQ96KK5 128 aa14.68□□□□□ -0.06
SMG6-220ENST00000576218 BBC3Q96PG8 261 aaPredicted RBP14.68□□□□□ -0.06
SMG6-220ENST00000576218 HIST1H2AJQ99878 128 aa14.68□□□□□ -0.06
SMG6-220ENST00000576218 WDR83Q9BRX9 315 aaKnown RBP14.68□□□□□ -0.06
SMG6-220ENST00000576218 H2AFJQ9BTM1 129 aa14.68□□□□□ -0.06
SMG6-220ENST00000576218 MRPS30Q9NP92 439 aaKnown RBP14.68□□□□□ -0.06
SMG6-220ENST00000576218 UTP6Q9NYH9 597 aaKnown RBP14.68□□□□□ -0.06
SMG6-220ENST00000576218 NDOR1Q9UHB4 597 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms