RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 FBXO8Q9NRD0 319 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 DNMT3LQ9UJW3 386 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 FCF1Q9Y324 198 aaKnown RBP17.03■□□□□ 0.32
SCARF1-205ENST00000571272 FAM32AQ9Y421 112 aaKnown RBP17.03■□□□□ 0.32
SCARF1-205ENST00000571272 GPC6Q9Y625 555 aaPredicted RBP17.03■□□□□ 0.32
SCARF1-205ENST00000571272 VWA8A3KMH1 1905 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 GSSP48637 474 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 ARHGDIAP52565 204 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 TMEM53Q6P2H8 277 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 SAPCD2Q86UD0 394 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 BTBD2Q9BX70 525 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 AFF4Q9UHB7 1163 aaKnown RBP17.03■□□□□ 0.32
SCARF1-205ENST00000571272 ZNF229Q9UJW7 825 aa17.03■□□□□ 0.32
SCARF1-205ENST00000571272 ILVBLA1L0T0 632 aa17.02■□□□□ 0.32
SCARF1-205ENST00000571272 RGS10O43665 173 aa17.02■□□□□ 0.32
SCARF1-205ENST00000571272 NBNO60934 754 aa17.02■□□□□ 0.32
SCARF1-205ENST00000571272 PDYNP01213 254 aa17.02■□□□□ 0.32
SCARF1-205ENST00000571272 SLC13A2Q13183 592 aa17.02■□□□□ 0.32
SCARF1-205ENST00000571272 SYT16Q17RD7 645 aa17.02■□□□□ 0.32
SCARF1-205ENST00000571272 ZCCHC8Q6NZY4 707 aaKnown RBP17.02■□□□□ 0.32
SCARF1-205ENST00000571272 NCEH1Q6PIU2 408 aa17.02■□□□□ 0.32
SCARF1-205ENST00000571272 AHSA2Q719I0 299 aa17.02■□□□□ 0.32
SCARF1-205ENST00000571272 ACOT13Q9NPJ3 140 aa17.02■□□□□ 0.32
SCARF1-205ENST00000571272 A0A096LPI6 279 aa17.02■□□□□ 0.31
SCARF1-205ENST00000571272 TTC34A8MYJ7 566 aa17.02■□□□□ 0.31
SCARF1-205ENST00000571272 UPK3BL1B0FP48 263 aa17.02■□□□□ 0.31
SCARF1-205ENST00000571272 UPK3BL2E5RIL1 263 aa17.02■□□□□ 0.31
SCARF1-205ENST00000571272 JUNDP17535 347 aa17.02■□□□□ 0.31
SCARF1-205ENST00000571272 DGKAP23743 735 aa17.02■□□□□ 0.31
SCARF1-205ENST00000571272 HMGCLP35914 325 aa17.02■□□□□ 0.31
SCARF1-205ENST00000571272 AGAP7PQ5VUJ5 663 aa17.02■□□□□ 0.31
SCARF1-205ENST00000571272 CAPN13Q6MZZ7 669 aaPredicted RBP17.02■□□□□ 0.31
SCARF1-205ENST00000571272 SNX20Q7Z614 316 aa17.02■□□□□ 0.31
SCARF1-205ENST00000571272 PLD3Q8IV08 490 aa17.02■□□□□ 0.31
SCARF1-205ENST00000571272 CARNMT1Q8N4J0 409 aa17.02■□□□□ 0.31
SCARF1-205ENST00000571272 SELENOMQ8WWX9 145 aa17.02■□□□□ 0.31
SCARF1-205ENST00000571272 PYCR2Q96C36 320 aa17.02■□□□□ 0.31
SCARF1-205ENST00000571272 TM6SF2Q9BZW4 377 aa17.02■□□□□ 0.31
SCARF1-205ENST00000571272 ABCB10Q9NRK6 738 aa17.02■□□□□ 0.31
SCARF1-205ENST00000571272 HCSTQ9UBK5 93 aa17.02■□□□□ 0.31
SCARF1-205ENST00000571272 PPT2Q9UMR5 302 aa17.02■□□□□ 0.31
SCARF1-205ENST00000571272 VPS4AQ9UN37 437 aa17.02■□□□□ 0.31
SCARF1-205ENST00000571272 RFXANKO14593 260 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 MYO1DO94832 1006 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 ALOX5P09917 674 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 ZDHHC11BP0C7U3 371 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 EBLN1P0CF75 366 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 CD36P16671 472 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 PTPN6P29350 595 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 CORO1AP31146 461 aaKnown RBP17.01■□□□□ 0.31
SCARF1-205ENST00000571272 FCGRTP55899 365 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 VLDLRP98155 873 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 LRIF1Q5T3J3 769 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 KDM4DQ6B0I6 523 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 OR4F3Q6IEY1 312 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 ATG16L2Q8NAA4 619 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 BHMTQ93088 406 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 DACH2Q96NX9 599 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 PSD2Q9BQI7 771 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 SLIRPQ9GZT3 109 aaKnown RBP17.01■□□□□ 0.31
SCARF1-205ENST00000571272 AASDHPPTQ9NRN7 309 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 TSC22D4Q9Y3Q8 395 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 NT5C1B-RDH14C9J2C7 533 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 STK16O75716 305 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 GSTT2P0CG29 244 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 GSTT2BP0CG30 244 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 MZF1P28698 734 aaPredicted RBP17.01■□□□□ 0.31
SCARF1-205ENST00000571272 KRT20P35900 424 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 MAGEA2P43356 314 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 RHOAP61586 193 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 ABHD18Q0P651 414 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 ZBTB2Q8N680 514 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 HTRA1Q92743 480 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 USP7Q93009 1102 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 WBP2Q969T9 261 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 APOL4Q9BPW4 351 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 NTMT1Q9BV86 223 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 IL1RAPQ9NPH3 570 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 SCHIP1Q9P0W5 487 aaPredicted RBP17.01■□□□□ 0.31
SCARF1-205ENST00000571272 KIF17Q9P2E2 1029 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 SLCO3A1Q9UIG8 710 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.01■□□□□ 0.31
SCARF1-205ENST00000571272 SAMD4AQ9UPU9 718 aaKnown RBP17.01■□□□□ 0.31
SCARF1-205ENST00000571272 AP3M1Q9Y2T2 418 aa17.01■□□□□ 0.31
SCARF1-205ENST00000571272 SLC38A8A6NNN8 435 aa17■□□□□ 0.31
SCARF1-205ENST00000571272 SYN3O14994 580 aa17■□□□□ 0.31
SCARF1-205ENST00000571272 FKBP9O95302 570 aa17■□□□□ 0.31
SCARF1-205ENST00000571272 ATF6P18850 670 aa17■□□□□ 0.31
SCARF1-205ENST00000571272 HOXA9P31269 272 aa17■□□□□ 0.31
SCARF1-205ENST00000571272 CLDN8P56748 225 aa17■□□□□ 0.31
SCARF1-205ENST00000571272 SEMG2Q02383 582 aa17■□□□□ 0.31
SCARF1-205ENST00000571272 CERS6Q6ZMG9 384 aa17■□□□□ 0.31
SCARF1-205ENST00000571272 HORMAD1Q86X24 394 aa17■□□□□ 0.31
SCARF1-205ENST00000571272 CCDC71Q8IV32 467 aaPredicted RBP17■□□□□ 0.31
SCARF1-205ENST00000571272 ADGRG2Q8IZP9 1017 aa17■□□□□ 0.31
SCARF1-205ENST00000571272 RBFAQ8N0V3 343 aa17■□□□□ 0.31
SCARF1-205ENST00000571272 PHF10Q8WUB8 498 aaKnown RBP17■□□□□ 0.31
SCARF1-205ENST00000571272 ZHX1-C8orf76Q96EF9 292 aa17■□□□□ 0.31
SCARF1-205ENST00000571272 DSN1Q9H410 356 aa17■□□□□ 0.31
SCARF1-205ENST00000571272 RMND5AQ9H871 391 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms