RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 SAMD15Q9P1V8 674 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 ANKMY1Q9P2S6 941 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 RAB21Q9UL25 225 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 HSF4Q9ULV5 492 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 DLGAP4Q9Y2H0 992 aa6.51□□□□□ -1.37
SMG1-217ENST00000569764 GPC6Q9Y625 555 aaPredicted RBP6.51□□□□□ -1.37
SMG1-217ENST00000569764 H3BQF6 201 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 FCHO1O14526 889 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 BCAT2O15382 392 aaPredicted RBP6.5□□□□□ -1.37
SMG1-217ENST00000569764 TLX3O43711 291 aaPredicted RBP6.5□□□□□ -1.37
SMG1-217ENST00000569764 IDH3BO43837 385 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 VPS4BO75351 444 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 DCNP07585 359 aaKnown RBP6.5□□□□□ -1.37
SMG1-217ENST00000569764 SRPRAP08240 638 aaKnown RBP6.5□□□□□ -1.37
SMG1-217ENST00000569764 SPARCP09486 303 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 PABPC1P11940 636 aaKnown RBP6.5□□□□□ -1.37
SMG1-217ENST00000569764 TRHRP34981 398 aaPredicted RBP6.5□□□□□ -1.37
SMG1-217ENST00000569764 PHBP35232 272 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 SLC26A3P40879 764 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 TPI1P60174 286 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 YWHAGP61981 247 aaKnown RBP eCLIP6.5□□□□□ -1.37
SMG1-217ENST00000569764 SPEM2Q0P670 501 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 SLAQ13239 276 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 CNTN4Q8IWV2 1026 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 RHOT2Q8IXI1 618 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 PRSS58Q8IYP2 241 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 SNIP1Q8TAD8 396 aaKnown RBP6.5□□□□□ -1.37
SMG1-217ENST00000569764 KTI12Q96EK9 354 aaPredicted RBP6.5□□□□□ -1.37
SMG1-217ENST00000569764 NOL11Q9H8H0 719 aaKnown RBP6.5□□□□□ -1.37
SMG1-217ENST00000569764 HEBP1Q9NRV9 189 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 R4GN57 208 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 C22orf46C9J442 243 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 WWP2O00308 870 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 TBX1O43435 398 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 TRIM3O75382 744 aaPredicted RBP6.5□□□□□ -1.37
SMG1-217ENST00000569764 RFPL3O75679 317 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 MYO1DO94832 1006 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 TP53P04637 393 aaPredicted RBP6.5□□□□□ -1.37
SMG1-217ENST00000569764 IL6P05231 212 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 SP9P0CG40 484 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 AMD1P17707 334 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 CORO1AP31146 461 aaKnown RBP6.5□□□□□ -1.37
SMG1-217ENST00000569764 CD97P48960 835 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 LPAL2Q16609 132 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 UPP1Q16831 310 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 C1orf146Q5VVC0 180 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 ZDHHC20Q5W0Z9 365 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 PLEKHA7Q6IQ23 1121 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 TMEM108Q6UXF1 575 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 SUN3Q8TAQ9 357 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 SETD6Q8TBK2 473 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 CA5BP1Q8WTZ4 195 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 ROBO4Q8WZ75 1007 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 BTN2A3PQ96KV6 586 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 RHOVQ96L33 236 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 NECAB3Q96P71 396 aaPredicted RBP6.5□□□□□ -1.37
SMG1-217ENST00000569764 KCNJ15Q99712 375 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 ZSWIM1Q9BR11 485 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 SPHK2Q9NRA0 654 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 FAM49BQ9NUQ9 324 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 DNAJC28Q9NX36 388 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 COQ4Q9Y3A0 265 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 OR6C70A6NIJ9 312 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 UPK3BL1B0FP48 263 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 UPK3BL2E5RIL1 263 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 PRSS44E7EML9 344 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 I3L4J1 428 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 AGRPO00253 132 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 LRCH4O75427 683 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 RBBP9O75884 186 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 C4BPAP04003 597 aaKnown RBP6.5□□□□□ -1.37
SMG1-217ENST00000569764 ALPPP05187 535 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 CRABP2P29373 138 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 FMO1Q01740 532 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 ALDH6A1Q02252 535 aaKnown RBP6.5□□□□□ -1.37
SMG1-217ENST00000569764 SPIDRQ14159 915 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 RPS6KA2Q15349 733 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 CLEC16AQ2KHT3 1053 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 PGS1Q32NB8 556 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 ZNF311Q5JNZ3 666 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 SH3PXD2AQ5TCZ1 1133 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 BTLAQ7Z6A9 289 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 WNT8BQ93098 351 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 DMRTA2Q96SC8 542 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 ELF4Q99607 663 aaPredicted RBP6.5□□□□□ -1.37
SMG1-217ENST00000569764 NLNQ9BYT8 704 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 PRO3102Q9H379 93 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 EBF3Q9H4W6 596 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 ERVMER34-1Q9H9K5 563 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 ASIC3Q9UHC3 531 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 SLC7A8Q9UHI5 535 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 ENTPD4Q9Y227 616 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 CACNG2Q9Y698 323 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 STYXL1Q9Y6J8 313 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 SCN1AP35498 2009 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 A0A1B0GVM2 712 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 TCAF2A6NFQ2 919 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 AGAP14A8MT82 685 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 LEFTY2O00292 366 aa6.5□□□□□ -1.37
SMG1-217ENST00000569764 RECQL5O94762 991 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms