RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 IRAK1BP1Q5VVH5 260 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 YOD1Q5VVQ6 348 aaPredicted RBP13.11□□□□□ -0.31
CNOT1-215ENST00000569020 PTRHD1Q6GMV3 140 aaKnown RBP13.11□□□□□ -0.31
CNOT1-215ENST00000569020 FIGLAQ6QHK4 219 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 OVCH1Q7RTY7 1134 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 TAX1BP1Q86VP1 789 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 KRT222Q8N1A0 295 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 RAB42Q8N4Z0 105 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 CCDC89Q8N998 374 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 TTC29Q8NA56 475 aaPredicted RBP13.11□□□□□ -0.31
CNOT1-215ENST00000569020 LKAAEAR1Q8TD35 194 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 VPS50Q96JG6 964 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 IL17FQ96PD4 163 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 DESI2Q9BSY9 194 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 WDR54Q9H977 334 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 SLC22A11Q9NSA0 550 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 CUTCQ9NTM9 273 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 CATSPERZQ9NTU4 200 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 PAK5Q9P286 719 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 CIDEBQ9UHD4 219 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 COPG1Q9Y678 874 aaKnown RBP13.11□□□□□ -0.31
CNOT1-215ENST00000569020 CAPN6Q9Y6Q1 641 aa13.11□□□□□ -0.31
CNOT1-215ENST00000569020 LRRK2Q5S007 2527 aa13.1□□□□□ -0.31
CNOT1-215ENST00000569020 A0A0U1RQJ8 604 aa13.1□□□□□ -0.31
CNOT1-215ENST00000569020 SLCO2B1O94956 709 aa13.1□□□□□ -0.31
CNOT1-215ENST00000569020 APRTP07741 180 aa13.1□□□□□ -0.31
CNOT1-215ENST00000569020 RNF224P0DH78 156 aa13.1□□□□□ -0.31
CNOT1-215ENST00000569020 AOAHP28039 575 aa13.1□□□□□ -0.31
CNOT1-215ENST00000569020 GRIA3P42263 894 aa13.1□□□□□ -0.31
CNOT1-215ENST00000569020 GRB7Q14451 532 aa13.1□□□□□ -0.31
CNOT1-215ENST00000569020 NKG7Q16617 165 aa13.1□□□□□ -0.31
CNOT1-215ENST00000569020 FAM214AQ32MH5 1076 aa13.1□□□□□ -0.31
CNOT1-215ENST00000569020 PCID2Q5JVF3 399 aa13.1□□□□□ -0.31
CNOT1-215ENST00000569020 PRAMEF13Q5VWM6 474 aa13.1□□□□□ -0.31
CNOT1-215ENST00000569020 FCRL6Q6DN72 434 aa13.1□□□□□ -0.31
CNOT1-215ENST00000569020 Q6ZS92 163 aa13.1□□□□□ -0.31
CNOT1-215ENST00000569020 LDB1Q86U70 411 aaPredicted RBP13.1□□□□□ -0.31
CNOT1-215ENST00000569020 LURAP1LQ8IV03 231 aa13.1□□□□□ -0.31
CNOT1-215ENST00000569020 TMEM139Q8IV31 216 aa13.1□□□□□ -0.31
CNOT1-215ENST00000569020 RNF10Q8N5U6 811 aaKnown RBP13.1□□□□□ -0.31
CNOT1-215ENST00000569020 LMNTD1Q8N9Z9 388 aa13.1□□□□□ -0.31
CNOT1-215ENST00000569020 SKA2Q8WVK7 121 aaPredicted RBP13.1□□□□□ -0.31
CNOT1-215ENST00000569020 ZUFSPQ96AP4 578 aa13.1□□□□□ -0.31
CNOT1-215ENST00000569020 RAD51AP1Q96B01 352 aa13.1□□□□□ -0.31
CNOT1-215ENST00000569020 SELENOSQ9BQE4 189 aa13.1□□□□□ -0.31
CNOT1-215ENST00000569020 SLC26A1Q9H2B4 701 aa13.1□□□□□ -0.31
CNOT1-215ENST00000569020 MRM3Q9HC36 420 aaKnown RBP13.1□□□□□ -0.31
CNOT1-215ENST00000569020 CHRAC1Q9NRG0 131 aa13.1□□□□□ -0.31
CNOT1-215ENST00000569020 AGPAT4Q9NRZ5 378 aa13.1□□□□□ -0.31
CNOT1-215ENST00000569020 IL1RAPL1Q9NZN1 696 aa13.1□□□□□ -0.31
CNOT1-215ENST00000569020 GNPTGQ9UJJ9 305 aa13.1□□□□□ -0.31
CNOT1-215ENST00000569020 NXT1Q9UKK6 140 aaKnown RBP13.1□□□□□ -0.31
CNOT1-215ENST00000569020 ANKUB1A6NFN9 424 aa13.09□□□□□ -0.31
CNOT1-215ENST00000569020 TARM1B6A8C7 271 aa13.09□□□□□ -0.31
CNOT1-215ENST00000569020 CD3EAPO15446 510 aaKnown RBP13.09□□□□□ -0.31
CNOT1-215ENST00000569020 ONECUT2O95948 504 aa13.09□□□□□ -0.31
CNOT1-215ENST00000569020 MCM3P25205 808 aa13.09□□□□□ -0.31
CNOT1-215ENST00000569020 CDC25BP30305 580 aa13.09□□□□□ -0.31
CNOT1-215ENST00000569020 SNX1Q13596 522 aa13.09□□□□□ -0.31
CNOT1-215ENST00000569020 AGAP7PQ5VUJ5 663 aa13.09□□□□□ -0.31
CNOT1-215ENST00000569020 MAMDC2Q7Z304 686 aaPredicted RBP13.09□□□□□ -0.31
CNOT1-215ENST00000569020 PRUNE1Q86TP1 453 aa13.09□□□□□ -0.31
CNOT1-215ENST00000569020 SLC13A5Q86YT5 568 aaPredicted RBP13.09□□□□□ -0.31
CNOT1-215ENST00000569020 MAGEC3Q8TD91 643 aa13.09□□□□□ -0.31
CNOT1-215ENST00000569020 PPP4R1Q8TF05 950 aa13.09□□□□□ -0.31
CNOT1-215ENST00000569020 UBE2Q2Q8WVN8 375 aa13.09□□□□□ -0.31
CNOT1-215ENST00000569020 C1orf54Q8WWF1 131 aa13.09□□□□□ -0.31
CNOT1-215ENST00000569020 INPP5DQ92835 1189 aa13.09□□□□□ -0.31
CNOT1-215ENST00000569020 C5orf34Q96MH7 638 aa13.09□□□□□ -0.31
CNOT1-215ENST00000569020 FOPNLQ96NB1 174 aa13.09□□□□□ -0.31
CNOT1-215ENST00000569020 AGAP4Q96P64 663 aa13.09□□□□□ -0.31
CNOT1-215ENST00000569020 SPSB2Q99619 263 aa13.09□□□□□ -0.31
CNOT1-215ENST00000569020 WDR77Q9BQA1 342 aaPredicted RBP13.09□□□□□ -0.31
CNOT1-215ENST00000569020 ZBTB20Q9HC78 741 aaPredicted RBP13.09□□□□□ -0.31
CNOT1-215ENST00000569020 SLC6A20Q9NP91 592 aa13.09□□□□□ -0.31
CNOT1-215ENST00000569020 ERRFI1Q9UJM3 462 aaPredicted RBP13.09□□□□□ -0.31
CNOT1-215ENST00000569020 FBXL4Q9UKA2 621 aa13.09□□□□□ -0.31
CNOT1-215ENST00000569020 TTC7AQ9ULT0 858 aaPredicted RBP13.09□□□□□ -0.31
CNOT1-215ENST00000569020 SLC5A6Q9Y289 635 aa13.09□□□□□ -0.31
CNOT1-215ENST00000569020 USP9YO00507 2555 aaPredicted RBP13.09□□□□□ -0.31
CNOT1-215ENST00000569020 MDC1Q14676 2089 aaKnown RBP13.08□□□□□ -0.32
CNOT1-215ENST00000569020 USP9XQ93008 2570 aaPredicted RBP13.08□□□□□ -0.32
CNOT1-215ENST00000569020 AP3B1O00203 1094 aa13.08□□□□□ -0.32
CNOT1-215ENST00000569020 SOCS6O14544 535 aa13.08□□□□□ -0.32
CNOT1-215ENST00000569020 SRPX2O60687 465 aaPredicted RBP13.08□□□□□ -0.32
CNOT1-215ENST00000569020 NDUFS3O75489 264 aa13.08□□□□□ -0.32
CNOT1-215ENST00000569020 ETS1P14921 441 aa13.08□□□□□ -0.32
CNOT1-215ENST00000569020 ITGAXP20702 1163 aa13.08□□□□□ -0.32
CNOT1-215ENST00000569020 RBBP7Q16576 425 aa13.08□□□□□ -0.32
CNOT1-215ENST00000569020 TUBB8Q3ZCM7 444 aa13.08□□□□□ -0.32
CNOT1-215ENST00000569020 CRB2Q5IJ48 1285 aa13.08□□□□□ -0.32
CNOT1-215ENST00000569020 COX15Q7KZN9 410 aa13.08□□□□□ -0.32
CNOT1-215ENST00000569020 OTOAQ7RTW8 1153 aa13.08□□□□□ -0.32
CNOT1-215ENST00000569020 CUZD1Q86UP6 607 aa13.08□□□□□ -0.32
CNOT1-215ENST00000569020 LRRC6Q86X45 466 aa13.08□□□□□ -0.32
CNOT1-215ENST00000569020 TMEM151BQ8IW70 566 aa13.08□□□□□ -0.32
CNOT1-215ENST00000569020 MPP5Q8N3R9 675 aa13.08□□□□□ -0.32
CNOT1-215ENST00000569020 COG1Q8WTW3 980 aa13.08□□□□□ -0.32
CNOT1-215ENST00000569020 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.08□□□□□ -0.32
CNOT1-215ENST00000569020 P2RY12Q9H244 342 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms