RNA–Protein interactions for RNA: ENST00000568169.5

TCF4-238, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-238	ENST00000568169	CSMD1	Q96PZ7	3565 aa		10.9	□□□□□ -0.67
TCF4-238	ENST00000568169	FITM1	A5D6W6	292 aa		10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	FTH1	P02794	183 aa		10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	PSMA3	P25788	255 aa		10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	HTR1E	P28566	365 aa		10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	SOX11	P35716	441 aa		10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	OR1D4	P47884	311 aa		10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	TNFSF10	P50591	281 aa		10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	RAB28	P51157	221 aa		10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	PLOD1	Q02809	727 aa	Predicted RBP	10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	SPARCL1	Q14515	664 aa		10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	ITIH4	Q14624	930 aa		10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	INA	Q16352	499 aa		10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	ZC3H12B	Q5HYM0	836 aa	Known RBP	10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	TCTE1	Q5JU00	501 aa		10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	CAVIN1	Q6NZI2	390 aa	Known RBP	10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	FIGLA	Q6QHK4	219 aa		10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	GFRAL	Q6UXV0	394 aa		10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	PACS1	Q6VY07	963 aa		10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	NAPRT	Q6XQN6	538 aa		10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	MRGPRG	Q86SM5	289 aa		10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	CCDC50	Q8IVM0	306 aa		10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	ZNF808	Q8N4W9	903 aa	Predicted RBP	10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	ACTL9	Q8TC94	416 aa		10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	CCDC120	Q96HB5	630 aa		10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	CCDC42	Q96M95	316 aa		10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	SPATA13	Q96N96	652 aa		10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	PPP1R2P1	Q96PQ5	205 aa		10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	FERMT1	Q9BQL6	677 aa		10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	CRB3	Q9BUF7	120 aa		10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	HEMGN	Q9BXL5	484 aa		10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	GOLPH3	Q9H4A6	298 aa		10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	CHST11	Q9NPF2	352 aa		10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	RYDEN	Q9NUL5	291 aa	Known RBP	10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	ZNHIT6	Q9NWK9	470 aa	Known RBP	10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	SUCO	Q9UBS9	1254 aa	Known RBP	10.89	□□□□□ -0.67
TCF4-238	ENST00000568169	TRAV17	A0A0B4J275	112 aa		10.88	□□□□□ -0.67
TCF4-238	ENST00000568169	DYTN	A2CJ06	578 aa		10.88	□□□□□ -0.67
TCF4-238	ENST00000568169	CCL21	O00585	134 aa		10.88	□□□□□ -0.67
TCF4-238	ENST00000568169	USP1	O94782	785 aa		10.88	□□□□□ -0.67
TCF4-238	ENST00000568169	S1PR4	O95977	384 aa		10.88	□□□□□ -0.67
TCF4-238	ENST00000568169	ACPP	P15309	386 aa		10.88	□□□□□ -0.67
TCF4-238	ENST00000568169	CD9	P21926	228 aa		10.88	□□□□□ -0.67
TCF4-238	ENST00000568169	GRIA3	P42263	894 aa		10.88	□□□□□ -0.67
TCF4-238	ENST00000568169	CA7	P43166	264 aa		10.88	□□□□□ -0.67
TCF4-238	ENST00000568169	CARS	P49589	748 aa	Known RBP	10.88	□□□□□ -0.67
TCF4-238	ENST00000568169	ARG2	P78540	354 aa		10.88	□□□□□ -0.67
TCF4-238	ENST00000568169	KLC1	Q07866	573 aa		10.88	□□□□□ -0.67
TCF4-238	ENST00000568169	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	10.88	□□□□□ -0.67
TCF4-238	ENST00000568169	FAM214A	Q32MH5	1076 aa		10.88	□□□□□ -0.67
TCF4-238	ENST00000568169	DNAJC21	Q5F1R6	531 aa	Known RBP	10.88	□□□□□ -0.67
TCF4-238	ENST00000568169	ATG9B	Q674R7	924 aa		10.88	□□□□□ -0.67
TCF4-238	ENST00000568169	KCTD11	Q693B1	232 aa		10.88	□□□□□ -0.67
TCF4-238	ENST00000568169	TMEM207	Q6UWW9	146 aa		10.88	□□□□□ -0.67
TCF4-238	ENST00000568169	CDKL3	Q8IVW4	592 aa	Predicted RBP	10.88	□□□□□ -0.67
TCF4-238	ENST00000568169	KBTBD2	Q8IY47	623 aa		10.88	□□□□□ -0.67
TCF4-238	ENST00000568169	DTWD1	Q8N5C7	304 aa		10.88	□□□□□ -0.67
TCF4-238	ENST00000568169	CCDC110	Q8TBZ0	833 aa		10.88	□□□□□ -0.67
TCF4-238	ENST00000568169	STT3B	Q8TCJ2	826 aa		10.88	□□□□□ -0.67
TCF4-238	ENST00000568169	STYX	Q8WUJ0	223 aa		10.88	□□□□□ -0.67
TCF4-238	ENST00000568169	HAS2	Q92819	552 aa		10.88	□□□□□ -0.67
TCF4-238	ENST00000568169	SLC22A18	Q96BI1	424 aa		10.88	□□□□□ -0.67
TCF4-238	ENST00000568169	MAGEB10	Q96LZ2	347 aa	Predicted RBP	10.88	□□□□□ -0.67
TCF4-238	ENST00000568169	TRIM8	Q9BZR9	551 aa		10.88	□□□□□ -0.67
TCF4-238	ENST00000568169	ZNF160	Q9HCG1	818 aa		10.88	□□□□□ -0.67
TCF4-238	ENST00000568169	INTS7	Q9NVH2	962 aa	Known RBP	10.88	□□□□□ -0.67
TCF4-238	ENST00000568169	PLA2G3	Q9NZ20	509 aa		10.88	□□□□□ -0.67
TCF4-238	ENST00000568169	ITPR3	Q14573	2671 aa		10.88	□□□□□ -0.67
TCF4-238	ENST00000568169	INTS1	Q8N201	2190 aa	Known RBP	10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	SPG11	Q96JI7	2443 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	TRGV8	A0A0C4DH27	118 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169		A0A1W2PQ72	361 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	GOLGA6L19	H0YKK7	550 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	MAP2K7	O14733	419 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	KCNN4	O15554	427 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	PRICKLE3	O43900	615 aa	Predicted RBP	10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	SRPX2	O60687	465 aa	Predicted RBP	10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	CTSV	O60911	334 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	STK10	O94804	968 aa	Known RBP	10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	FKBP9	O95302	570 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	MED26	O95402	600 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	SNRPB2	P08579	225 aa	Known RBP	10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	PRR35	P0CG20	571 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	RBP3	P10745	1247 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	COX6B1	P14854	86 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	TPH1	P17752	444 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	FDXR	P22570	491 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	MST1	P26927	711 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	FOXN2	P32314	431 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	EIF3E	P60228	445 aa	Known RBP	10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	COPS2	P61201	443 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	TRIM14	Q14142	442 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	GRB7	Q14451	532 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	WASHC2D	Q5SRD0	308 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	CCDC181	Q5TID7	509 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	MTFR2	Q6P444	385 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	RPTN	Q6XPR3	784 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	NLRP9	Q7RTR0	991 aa		10.87	□□□□□ -0.67
TCF4-238	ENST00000568169	SLC22A15	Q8IZD6	547 aa		10.87	□□□□□ -0.67

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