RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 GRM7Q14831 915 aa13.13□□□□□ -0.31
SMG1-213ENST00000567737 CCDC183Q5T5S1 534 aa13.13□□□□□ -0.31
SMG1-213ENST00000567737 UNC5AQ6ZN44 842 aa13.13□□□□□ -0.31
SMG1-213ENST00000567737 MCATQ8IVS2 390 aaKnown RBP13.13□□□□□ -0.31
SMG1-213ENST00000567737 CNTD1Q8N815 330 aa13.13□□□□□ -0.31
SMG1-213ENST00000567737 FAM98AQ8NCA5 519 aaKnown RBP13.13□□□□□ -0.31
SMG1-213ENST00000567737 GOT1L1Q8NHS2 421 aaPredicted RBP13.13□□□□□ -0.31
SMG1-213ENST00000567737 IMP4Q96G21 291 aaKnown RBP13.13□□□□□ -0.31
SMG1-213ENST00000567737 GPATCH1Q9BRR8 931 aaKnown RBP13.13□□□□□ -0.31
SMG1-213ENST00000567737 TRIM51Q9BSJ1 452 aa13.13□□□□□ -0.31
SMG1-213ENST00000567737 TRABDQ9H4I3 376 aa13.13□□□□□ -0.31
SMG1-213ENST00000567737 ZNF395Q9H8N7 513 aaPredicted RBP13.13□□□□□ -0.31
SMG1-213ENST00000567737 KLHL1Q9NR64 748 aa13.13□□□□□ -0.31
SMG1-213ENST00000567737 SPHK1Q9NYA1 384 aa13.13□□□□□ -0.31
SMG1-213ENST00000567737 TAB2Q9NYJ8 693 aa13.13□□□□□ -0.31
SMG1-213ENST00000567737 ZNF282Q9UDV7 671 aaPredicted RBP13.13□□□□□ -0.31
SMG1-213ENST00000567737 RNF6Q9Y252 685 aa13.13□□□□□ -0.31
SMG1-213ENST00000567737 SCINQ9Y6U3 715 aa13.13□□□□□ -0.31
SMG1-213ENST00000567737 HCFC1P51610 2035 aa13.12□□□□□ -0.31
SMG1-213ENST00000567737 ISM1B1AKI9 464 aa13.12□□□□□ -0.31
SMG1-213ENST00000567737 IDSB3KWA1 339 aa13.12□□□□□ -0.31
SMG1-213ENST00000567737 ICAM2P13598 275 aa13.12□□□□□ -0.31
SMG1-213ENST00000567737 CD151P48509 253 aa13.12□□□□□ -0.31
SMG1-213ENST00000567737 YBX1P67809 324 aaKnown RBP13.12□□□□□ -0.31
SMG1-213ENST00000567737 ZBTB17Q13105 803 aa13.12□□□□□ -0.31
SMG1-213ENST00000567737 BOP1Q14137 746 aaKnown RBP13.12□□□□□ -0.31
SMG1-213ENST00000567737 FAM214AQ32MH5 1076 aa13.12□□□□□ -0.31
SMG1-213ENST00000567737 TCTE1Q5JU00 501 aa13.12□□□□□ -0.31
SMG1-213ENST00000567737 ZNF449Q6P9G9 518 aa13.12□□□□□ -0.31
SMG1-213ENST00000567737 MYRIPQ8NFW9 859 aa13.12□□□□□ -0.31
SMG1-213ENST00000567737 RND1Q92730 232 aa13.12□□□□□ -0.31
SMG1-213ENST00000567737 HDAC10Q969S8 669 aa13.12□□□□□ -0.31
SMG1-213ENST00000567737 DCUN1D1Q96GG9 259 aa13.12□□□□□ -0.31
SMG1-213ENST00000567737 FRMD6Q96NE9 622 aa13.12□□□□□ -0.31
SMG1-213ENST00000567737 OR52A5Q9H2C5 316 aa13.12□□□□□ -0.31
SMG1-213ENST00000567737 COG4Q9H9E3 785 aa13.12□□□□□ -0.31
SMG1-213ENST00000567737 ZNF304Q9HCX3 659 aa13.12□□□□□ -0.31
SMG1-213ENST00000567737 IL17CQ9P0M4 197 aa13.12□□□□□ -0.31
SMG1-213ENST00000567737 PKP3Q9Y446 797 aa13.12□□□□□ -0.31
SMG1-213ENST00000567737 ASB1Q9Y576 335 aa13.12□□□□□ -0.31
SMG1-213ENST00000567737 INTS1Q8N201 2190 aaKnown RBP13.12□□□□□ -0.31
SMG1-213ENST00000567737 FBN1P35555 2871 aaKnown RBP13.12□□□□□ -0.31
SMG1-213ENST00000567737 CPAMD8Q8IZJ3 1885 aa13.12□□□□□ -0.31
SMG1-213ENST00000567737 A0A1W2PQ72 361 aa13.11□□□□□ -0.31
SMG1-213ENST00000567737 RASGRF2O14827 1237 aa13.11□□□□□ -0.31
SMG1-213ENST00000567737 KLK8O60259 260 aa13.11□□□□□ -0.31
SMG1-213ENST00000567737 LY6G6DO95868 133 aa13.11□□□□□ -0.31
SMG1-213ENST00000567737 CD48P09326 243 aa13.11□□□□□ -0.31
SMG1-213ENST00000567737 CCDC172P0C7W6 258 aa13.11□□□□□ -0.31
SMG1-213ENST00000567737 MCM3P25205 808 aa13.11□□□□□ -0.31
SMG1-213ENST00000567737 PRLHRP49683 370 aa13.11□□□□□ -0.31
SMG1-213ENST00000567737 EMP2P54851 167 aa13.11□□□□□ -0.31
SMG1-213ENST00000567737 IFI35P80217 286 aaPredicted RBP13.11□□□□□ -0.31
SMG1-213ENST00000567737 SLC14A2Q15849 920 aa13.11□□□□□ -0.31
SMG1-213ENST00000567737 TCP11X2Q5H9J9 407 aa13.11□□□□□ -0.31
SMG1-213ENST00000567737 FKBP15Q5T1M5 1219 aa13.11□□□□□ -0.31
SMG1-213ENST00000567737 ARHGEF18Q6ZSZ5 1173 aa13.11□□□□□ -0.31
SMG1-213ENST00000567737 SIAH3Q8IW03 269 aa13.11□□□□□ -0.31
SMG1-213ENST00000567737 MARVELD2Q8N4S9 558 aa13.11□□□□□ -0.31
SMG1-213ENST00000567737 TMEM178AQ8NBL3 297 aa13.11□□□□□ -0.31
SMG1-213ENST00000567737 FLVCR1-AS1Q8TAF5 88 aa13.11□□□□□ -0.31
SMG1-213ENST00000567737 ZNF398Q8TD17 642 aa13.11□□□□□ -0.31
SMG1-213ENST00000567737 TFGQ92734 400 aaPredicted RBP13.11□□□□□ -0.31
SMG1-213ENST00000567737 ZNF830Q96NB3 372 aaPredicted RBP13.11□□□□□ -0.31
SMG1-213ENST00000567737 MRPL47Q9HD33 250 aaKnown RBP13.11□□□□□ -0.31
SMG1-213ENST00000567737 MKL2Q9ULH7 1088 aa13.11□□□□□ -0.31
SMG1-213ENST00000567737 COL6A5A8TX70 2615 aa13.11□□□□□ -0.31
SMG1-213ENST00000567737 F12P00748 615 aaPredicted RBP13.1□□□□□ -0.31
SMG1-213ENST00000567737 TPOP07202 933 aa13.1□□□□□ -0.31
SMG1-213ENST00000567737 RALBP11234 206 aa13.1□□□□□ -0.31
SMG1-213ENST00000567737 MAGP20916 626 aa13.1□□□□□ -0.31
SMG1-213ENST00000567737 EEF1GP26641 437 aaKnown RBP13.1□□□□□ -0.31
SMG1-213ENST00000567737 PPP2R2BQ00005 443 aa13.1□□□□□ -0.31
SMG1-213ENST00000567737 DEFB113Q30KQ7 82 aa13.1□□□□□ -0.31
SMG1-213ENST00000567737 ZC3H12BQ5HYM0 836 aaKnown RBP13.1□□□□□ -0.31
SMG1-213ENST00000567737 KDELC1Q6UW63 502 aa13.1□□□□□ -0.31
SMG1-213ENST00000567737 CD163Q86VB7 1156 aa13.1□□□□□ -0.31
SMG1-213ENST00000567737 CHERPQ8IWX8 916 aaKnown RBP13.1□□□□□ -0.31
SMG1-213ENST00000567737 ZZZ3Q8IYH5 903 aa13.1□□□□□ -0.31
SMG1-213ENST00000567737 NEK11Q8NG66 645 aa13.1□□□□□ -0.31
SMG1-213ENST00000567737 FAM57AQ8TBR7 257 aa13.1□□□□□ -0.31
SMG1-213ENST00000567737 HES7Q9BYE0 225 aa13.1□□□□□ -0.31
SMG1-213ENST00000567737 CEP41Q9BYV8 373 aa13.1□□□□□ -0.31
SMG1-213ENST00000567737 SLC25A51Q9H1U9 297 aa13.1□□□□□ -0.31
SMG1-213ENST00000567737 RASSF1Q9NS23 344 aa13.1□□□□□ -0.31
SMG1-213ENST00000567737 OR6C2Q9NZP2 312 aa13.1□□□□□ -0.31
SMG1-213ENST00000567737 MYO1AQ9UBC5 1043 aa13.1□□□□□ -0.31
SMG1-213ENST00000567737 STAB1Q9NY15 2570 aa13.1□□□□□ -0.31
SMG1-213ENST00000567737 GAPDHSO14556 408 aaPredicted RBP13.09□□□□□ -0.31
SMG1-213ENST00000567737 BUD23O43709 281 aaKnown RBP13.09□□□□□ -0.31
SMG1-213ENST00000567737 SGTAO43765 313 aa13.09□□□□□ -0.31
SMG1-213ENST00000567737 RAF1P04049 648 aa13.09□□□□□ -0.31
SMG1-213ENST00000567737 TPM2P07951 284 aa13.09□□□□□ -0.31
SMG1-213ENST00000567737 ZNF24P17028 368 aa13.09□□□□□ -0.31
SMG1-213ENST00000567737 PDHA2P29803 388 aa13.09□□□□□ -0.31
SMG1-213ENST00000567737 HOXC12P31275 282 aa13.09□□□□□ -0.31
SMG1-213ENST00000567737 PTGS2P35354 604 aa13.09□□□□□ -0.31
SMG1-213ENST00000567737 TNNT3P45378 269 aaPredicted RBP13.09□□□□□ -0.31
SMG1-213ENST00000567737 SLC25A11Q02978 314 aaKnown RBP13.09□□□□□ -0.31
SMG1-213ENST00000567737 GBE1Q04446 702 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms