RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	EURL	Q9NYK6	297 aa		6.66	□□□□□ -1.34
SF3B3-209	ENST00000567635	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	6.66	□□□□□ -1.34
SF3B3-209	ENST00000567635	GALP	Q9UBC7	116 aa		6.66	□□□□□ -1.34
SF3B3-209	ENST00000567635	CIDEB	Q9UHD4	219 aa		6.66	□□□□□ -1.34
SF3B3-209	ENST00000567635	TLK1	Q9UKI8	766 aa		6.66	□□□□□ -1.34
SF3B3-209	ENST00000567635	TCFL5	Q9UL49	500 aa		6.66	□□□□□ -1.34
SF3B3-209	ENST00000567635	SNX7	Q9UNH6	387 aa		6.66	□□□□□ -1.34
SF3B3-209	ENST00000567635	KLHL20	Q9Y2M5	609 aa		6.66	□□□□□ -1.34
SF3B3-209	ENST00000567635	NFS1	Q9Y697	457 aa		6.66	□□□□□ -1.34
SF3B3-209	ENST00000567635	MAD1L1	Q9Y6D9	718 aa		6.66	□□□□□ -1.34
SF3B3-209	ENST00000567635	PRRC2C	Q9Y520	2896 aa	Known RBP	6.66	□□□□□ -1.34
SF3B3-209	ENST00000567635	ZCWPW2	A0A1B0GU75	182 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635		C9J4A7	227 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635		H3BMH7	237 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	DYNC1I1	O14576	645 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	ZSCAN9	O15535	394 aa	Predicted RBP	6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	USP1	O94782	785 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	FKBP9	O95302	570 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	WISP1	O95388	367 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	CAPN1	P07384	714 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	CBSL	P0DN79	551 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	TCP1	P17987	556 aa	Known RBP	6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	MAG	P20916	626 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	ALAS2	P22557	587 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	CBS	P35520	551 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	GRIA3	P42263	894 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	MAGEA3	P43357	314 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	BDKRB1	P46663	353 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	CCL11	P51671	97 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	DCD	P81605	110 aa	Known RBP	6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	FOXK1	P85037	733 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	KCNC4	Q03721	635 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	CTBP1	Q13363	440 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	IL10RA	Q13651	578 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	GBX1	Q14549	363 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	CYP2A13	Q16696	494 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	KLHL38	Q2WGJ6	581 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	CCSMST1	Q4G0I0	132 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	NKAIN1	Q4KMZ8	207 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	ACSBG2	Q5FVE4	666 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	RNASEH2B	Q5TBB1	312 aa	Known RBP	6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	MLIP	Q5VWP3	458 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	FCRL6	Q6DN72	434 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	ZNF470	Q6ECI4	717 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	RHBDD2	Q6NTF9	364 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	CNST	Q6PJW8	725 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	ASB18	Q6ZVZ8	466 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	PCGF5	Q86SE9	256 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	LMNTD2	Q8IXW0	634 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	ZBTB2	Q8N680	514 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	ZNF655	Q8N720	491 aa	Predicted RBP	6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	ENDOV	Q8N8Q3	282 aa	Known RBP	6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	OR9A1P	Q8NGU1	263 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	GABPB2	Q8TAK5	448 aa	Predicted RBP	6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	HMGCLL1	Q8TB92	370 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	CALML6	Q8TD86	181 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	DENND1A	Q8TEH3	1009 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	DLG3	Q92796	817 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	SLCO2A1	Q92959	643 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	FAM136A	Q96C01	138 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	C17orf62	Q9BQA9	187 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	TRIM56	Q9BRZ2	755 aa	Known RBP	6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	DHRS4	Q9BTZ2	278 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	CCDC68	Q9H2F9	335 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	ACSS2	Q9NR19	701 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	FAM114A2	Q9NRY5	505 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	C20orf96	Q9NUD7	363 aa	Predicted RBP	6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	TXLNG	Q9NUQ3	528 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	IRAK4	Q9NWZ3	460 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	IL1RAPL1	Q9NZN1	696 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	KLHL42	Q9P2K6	505 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	ASIC3	Q9UHC3	531 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	PCYOX1	Q9UHG3	505 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	GPN3	Q9UHW5	284 aa	Predicted RBP	6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	ANAPC2	Q9UJX6	822 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	FBXO5	Q9UKT4	447 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	SRPK3	Q9UPE1	567 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	TP53TG5	Q9Y2B4	290 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	COMMD10	Q9Y6G5	202 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	FAM169A	Q9Y6X4	670 aa		6.65	□□□□□ -1.34
SF3B3-209	ENST00000567635	SHANK1	Q9Y566	2161 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	ARGFX	A6NJG6	315 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	USP27X	A6NNY8	438 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	PYCARD-AS1	I3L0S3	204 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635		K7EM74	188 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	DNALI1	O14645	258 aa	Predicted RBP	6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	SRPX2	O60687	465 aa	Predicted RBP	6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	PSIP1	O75475	530 aa	Known RBP	6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	HAUS5	O94927	633 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	ZIC2	O95409	532 aa	Predicted RBP	6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	CTSB	P07858	339 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	PIM1	P11309	404 aa	Predicted RBP	6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	HSD17B2	P37059	387 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	CASR	P41180	1078 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	SLC1A2	P43004	574 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	PTGIR	P43119	386 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	CSRP3	P50461	194 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	CLCN7	P51798	805 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	ARSF	P54793	590 aa		6.64	□□□□□ -1.35
SF3B3-209	ENST00000567635	GNG11	P61952	73 aa		6.64	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms