RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 TAP2Q03519 686 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 SLC18A2Q05940 514 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 KIR2DS3Q14952 304 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 ARHGAP19Q14CB8 494 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 C16orf72Q14CZ0 275 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 FAM83EQ2M2I3 478 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 C18orf21Q32NC0 220 aaPredicted RBP7.89□□□□□ -1.15
CDH13-208ENST00000566333 CEP85LQ5SZL2 805 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 N4BP2L1Q5TBK1 243 aaPredicted RBP7.89□□□□□ -1.15
CDH13-208ENST00000566333 LGSNQ5TDP6 509 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 IRGCQ6NXR0 463 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 SPESP1Q6UW49 350 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 FAM92BQ6ZTR7 304 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 PRSS42Q7Z5A4 293 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 MARCH9Q86YJ5 346 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 CNPY4Q8N129 248 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 C4orf33Q8N1A6 199 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 C2orf73Q8N5S3 287 aaPredicted RBP7.89□□□□□ -1.15
CDH13-208ENST00000566333 PPFIBP2Q8ND30 876 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 RHEBL1Q8TAI7 183 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 MAGEC3Q8TD91 643 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 UBTD2Q8WUN7 234 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 NCSTNQ92542 709 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 EXT2Q93063 718 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 ZBTB9Q96C00 473 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 RHBDF1Q96CC6 855 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 FBXL8Q96CD0 374 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 AHCYL2Q96HN2 611 aaKnown RBP7.89□□□□□ -1.15
CDH13-208ENST00000566333 CABS1Q96KC9 395 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 TGM7Q96PF1 710 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 OR4K3Q96R72 315 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 SGPP1Q9BX95 441 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 NMRAL1Q9HBL8 299 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 HRASLS2Q9NWW9 162 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 MKS1Q9NXB0 559 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 SIDT1Q9NXL6 827 aaKnown RBP7.89□□□□□ -1.15
CDH13-208ENST00000566333 ARL15Q9NXU5 204 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 ACTR10Q9NZ32 417 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 XPR1Q9UBH6 696 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 TLK1Q9UKI8 766 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 RNF112Q9ULX5 631 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 SH2B3Q9UQQ2 575 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 ENTPD2Q9Y5L3 495 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 ZFHX4Q86UP3 3567 aa7.89□□□□□ -1.15
CDH13-208ENST00000566333 MAP1BP46821 2468 aaKnown RBP7.89□□□□□ -1.15
CDH13-208ENST00000566333 IGHV5-51A0A0C4DH38 117 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 IGKV1-8A0A0C4DH67 115 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 TLDC2A0PJX2 215 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 FAM149AA5PLN7 773 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 NCF1BA6NI72 391 aaPredicted RBP7.88□□□□□ -1.15
CDH13-208ENST00000566333 NCF1CA8MVU1 366 aaPredicted RBP7.88□□□□□ -1.15
CDH13-208ENST00000566333 C2orf74A8MZ97 194 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 UBXN8O00124 270 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 MATN2O00339 956 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 TAPBPO15533 448 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 HYAL3O43820 417 aaPredicted RBP7.88□□□□□ -1.15
CDH13-208ENST00000566333 KLK8O60259 260 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 KDM1AO60341 852 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 MT-CO3P00414 261 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 MT-ND3P03897 115 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 NCF1P14598 390 aaPredicted RBP7.88□□□□□ -1.15
CDH13-208ENST00000566333 PVRP15151 417 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 ST6GAL1P15907 406 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 CREB1P16220 341 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 KRT4P19013 534 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 PRDX3P30048 256 aaKnown RBP7.88□□□□□ -1.15
CDH13-208ENST00000566333 SLC6A12P48065 614 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 ACAP2Q15057 778 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 ZIC1Q15915 447 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 SLC5A12Q1EHB4 618 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 ISXQ2M1V0 245 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 TSNAXIP1Q2TAA8 658 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 FBXO48Q5FWF7 155 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 CDKL4Q5MAI5 379 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 TMEM71Q6P5X7 295 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 TTC23LQ6PF05 361 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 KLHL35Q6PF15 583 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 AGTRAPQ6RW13 159 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 SUSD1Q6UWL2 747 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 FRA10AC1Q70Z53 315 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 TMPRSS7Q7RTY8 843 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 ARHGAP22Q7Z5H3 698 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 LCA5Q86VQ0 697 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 TMPRSS12Q86WS5 348 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 GPSM1Q86YR5 675 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 PLXDC1Q8IUK5 500 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 FAM20CQ8IXL6 584 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 SRRM1Q8IYB3 904 aaKnown RBP7.88□□□□□ -1.15
CDH13-208ENST00000566333 KLHDC8AQ8IYD2 350 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 SYTL1Q8IYJ3 562 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 CACTIN-AS1Q8N1I8 211 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 CHCHD4Q8N4Q1 142 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 BANPQ8N9N5 519 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 RCBTB1Q8NDN9 531 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 OR2A1Q8NGT9 310 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 OR56A3Q8NH54 315 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 MCOLN3Q8TDD5 553 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 SMPDL3AQ92484 453 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 PGM2Q96G03 612 aa7.88□□□□□ -1.15
CDH13-208ENST00000566333 LIN37Q96GY3 246 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms