RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 CDX2Q99626 313 aaPredicted RBP6.06□□□□□ -1.44
CHD9-217ENST00000565832 HIST1H2AJQ99878 128 aa6.06□□□□□ -1.44
CHD9-217ENST00000565832 H2AFJQ9BTM1 129 aa6.06□□□□□ -1.44
CHD9-217ENST00000565832 TUBB6Q9BUF5 446 aa6.06□□□□□ -1.44
CHD9-217ENST00000565832 CCDC28BQ9BUN5 200 aa6.06□□□□□ -1.44
CHD9-217ENST00000565832 SLC17A9Q9BYT1 436 aa6.06□□□□□ -1.44
CHD9-217ENST00000565832 PRDM6Q9NQX0 595 aa6.06□□□□□ -1.44
CHD9-217ENST00000565832 NFKBIL1Q9UBC1 381 aaPredicted RBP6.06□□□□□ -1.44
CHD9-217ENST00000565832 OPTCQ9UBM4 332 aa6.06□□□□□ -1.44
CHD9-217ENST00000565832 SORCS3Q9UPU3 1222 aa6.06□□□□□ -1.44
CHD9-217ENST00000565832 ANGPTL3Q9Y5C1 460 aa6.06□□□□□ -1.44
CHD9-217ENST00000565832 CACNA1IQ9P0X4 2223 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 A0A088AWK7 358 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 PRAMEF33A0A0G2JMD5 474 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 H3BM21 787 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 K7EPI3 171 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 PSMD12O00232 456 aaPredicted RBP6.05□□□□□ -1.44
CHD9-217ENST00000565832 FBP2O00757 339 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 RNGTTO60942 597 aaKnown RBP6.05□□□□□ -1.44
CHD9-217ENST00000565832 SH3BGRLO75368 114 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 UROSP10746 265 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 ENO3P13929 434 aaPredicted RBP6.05□□□□□ -1.44
CHD9-217ENST00000565832 ACPPP15309 386 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 ITGAXP20702 1163 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 HNRNPH1P31943 449 aaKnown RBP6.05□□□□□ -1.44
CHD9-217ENST00000565832 GGT5P36269 586 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 DPP6P42658 865 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 NUDT2P50583 147 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 INHBCP55103 352 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 PFN3P60673 137 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 SGCGQ13326 291 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 TSTA3Q13630 321 aaPredicted RBP6.05□□□□□ -1.44
CHD9-217ENST00000565832 CYLC2Q14093 348 aaPredicted RBP6.05□□□□□ -1.44
CHD9-217ENST00000565832 FASTKQ14296 549 aaKnown RBP6.05□□□□□ -1.44
CHD9-217ENST00000565832 STARD3Q14849 445 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 SF1Q15637 639 aaKnown RBP6.05□□□□□ -1.44
CHD9-217ENST00000565832 RFTN2Q52LD8 501 aaPredicted RBP6.05□□□□□ -1.44
CHD9-217ENST00000565832 ADNP2Q6IQ32 1131 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 LAYNQ6UX15 382 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 KIAA1324Q6UXG2 1013 aaKnown RBP6.05□□□□□ -1.44
CHD9-217ENST00000565832 DEFB107AQ8IZN7 70 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 SFRP1Q8N474 314 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 MCOLN3Q8TDD5 553 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 HMGB4Q8WW32 186 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 FAM3CQ92520 227 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 MCUR1Q96AQ8 359 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 CMTM5Q96DZ9 223 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 COX14Q96I36 57 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 ASB2Q96Q27 587 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 OR4K3Q96R72 315 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 ZNF382Q96SR6 550 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 PKP4Q99569 1192 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 TRIM8Q9BZR9 551 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 RASSF4Q9H2L5 321 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 EBF2Q9HAK2 575 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 RDH14Q9HBH5 336 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 RAD18Q9NS91 495 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 NKX1-2Q9UD57 310 aaPredicted RBP6.05□□□□□ -1.44
CHD9-217ENST00000565832 KLQ9UEF7 1012 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 EBF1Q9UH73 591 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 ATXN7L1Q9ULK2 861 aaPredicted RBP6.05□□□□□ -1.44
CHD9-217ENST00000565832 PLAGL1Q9UM63 463 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 L3MBTL1Q9Y468 752 aa6.05□□□□□ -1.44
CHD9-217ENST00000565832 TNPO3Q9Y5L0 923 aaKnown RBP6.05□□□□□ -1.44
CHD9-217ENST00000565832 TCRBV21S2A2A0A5A6 115 aa6.04□□□□□ -1.44
CHD9-217ENST00000565832 CFLARO15519 480 aa6.04□□□□□ -1.44
CHD9-217ENST00000565832 PLRG1O43660 514 aaKnown RBP6.04□□□□□ -1.44
CHD9-217ENST00000565832 PSIP1O75475 530 aaKnown RBP6.04□□□□□ -1.44
CHD9-217ENST00000565832 SNUPNO95149 360 aaKnown RBP6.04□□□□□ -1.44
CHD9-217ENST00000565832 C1orf105O95561 183 aa6.04□□□□□ -1.44
CHD9-217ENST00000565832 ATP6V1G2O95670 118 aa6.04□□□□□ -1.44
CHD9-217ENST00000565832 C8GP07360 202 aa6.04□□□□□ -1.44
CHD9-217ENST00000565832 THRAP10827 490 aa6.04□□□□□ -1.44
CHD9-217ENST00000565832 IL9P15248 144 aa6.04□□□□□ -1.44
CHD9-217ENST00000565832 GPX3P22352 226 aa6.04□□□□□ -1.44
CHD9-217ENST00000565832 TRIM23P36406 574 aa6.04□□□□□ -1.44
CHD9-217ENST00000565832 TPMTP51580 245 aa6.04□□□□□ -1.44
CHD9-217ENST00000565832 ATXN3P54252 364 aaPredicted RBP6.04□□□□□ -1.44
CHD9-217ENST00000565832 UFM1P61960 85 aa6.04□□□□□ -1.44
CHD9-217ENST00000565832 RPS21P63220 83 aaKnown RBP6.04□□□□□ -1.44
CHD9-217ENST00000565832 NAE1Q13564 534 aa6.04□□□□□ -1.44
CHD9-217ENST00000565832 KPNB1Q14974 876 aaKnown RBP6.04□□□□□ -1.44
CHD9-217ENST00000565832 KIF19Q2TAC6 998 aa6.04□□□□□ -1.44
CHD9-217ENST00000565832 VPS26BQ4G0F5 336 aa6.04□□□□□ -1.44
CHD9-217ENST00000565832 C6orf136Q5SQH8 315 aa6.04□□□□□ -1.44
CHD9-217ENST00000565832 TPRG1LQ5T0D9 272 aa6.04□□□□□ -1.44
CHD9-217ENST00000565832 SUSD1Q6UWL2 747 aa6.04□□□□□ -1.44
CHD9-217ENST00000565832 ZNF765Q7L2R6 523 aa6.04□□□□□ -1.44
CHD9-217ENST00000565832 HPS6Q86YV9 775 aa6.04□□□□□ -1.44
CHD9-217ENST00000565832 ULK2Q8IYT8 1036 aa6.04□□□□□ -1.44
CHD9-217ENST00000565832 DSELQ8IZU8 1212 aa6.04□□□□□ -1.44
CHD9-217ENST00000565832 TP53I13Q8NBR0 393 aaPredicted RBP6.04□□□□□ -1.44
CHD9-217ENST00000565832 FAM156AQ8NDB6 213 aa6.04□□□□□ -1.44
CHD9-217ENST00000565832 VPS33AQ96AX1 596 aa6.04□□□□□ -1.44
CHD9-217ENST00000565832 FAR2Q96K12 515 aa6.04□□□□□ -1.44
CHD9-217ENST00000565832 IL17FQ96PD4 163 aa6.04□□□□□ -1.44
CHD9-217ENST00000565832 SLC39A3Q9BRY0 314 aa6.04□□□□□ -1.44
CHD9-217ENST00000565832 PHF7Q9BWX1 381 aaPredicted RBP6.04□□□□□ -1.44
CHD9-217ENST00000565832 SLC32A1Q9H598 525 aa6.04□□□□□ -1.44
CHD9-217ENST00000565832 ACTR8Q9H981 624 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms