RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 MR1Q95460 341 aa4.32□□□□□ -1.72
LINC00560-201ENST00000564593 EXOC4Q96A65 974 aa4.32□□□□□ -1.72
LINC00560-201ENST00000564593 SPATA33Q96N06 139 aa4.32□□□□□ -1.72
LINC00560-201ENST00000564593 FNBP1Q96RU3 617 aa4.32□□□□□ -1.72
LINC00560-201ENST00000564593 DESI2Q9BSY9 194 aa4.32□□□□□ -1.72
LINC00560-201ENST00000564593 INPP5KQ9BT40 448 aa4.32□□□□□ -1.72
LINC00560-201ENST00000564593 URM1Q9BTM9 101 aaKnown RBP4.32□□□□□ -1.72
LINC00560-201ENST00000564593 SLC2A11Q9BYW1 496 aa4.32□□□□□ -1.72
LINC00560-201ENST00000564593 LAT2Q9GZY6 243 aa4.32□□□□□ -1.72
LINC00560-201ENST00000564593 ARGLU1Q9NWB6 273 aaPredicted RBP4.32□□□□□ -1.72
LINC00560-201ENST00000564593 WDR83OSQ9Y284 106 aa4.32□□□□□ -1.72
LINC00560-201ENST00000564593 TRIM17Q9Y577 477 aa4.32□□□□□ -1.72
LINC00560-201ENST00000564593 SCN5AQ14524 2016 aa4.32□□□□□ -1.72
LINC00560-201ENST00000564593 A0A1W2PN81 502 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 ANKRD61A6NGH8 418 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 DUXAA6NLW8 204 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 FGF17O60258 216 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 KRT36O76013 467 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 LUC7L3O95232 432 aaKnown RBP4.31□□□□□ -1.72
LINC00560-201ENST00000564593 GSRP00390 522 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 CASTP20810 708 aaKnown RBP4.31□□□□□ -1.72
LINC00560-201ENST00000564593 CA4P22748 312 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 CHRNA7P36544 502 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 WNT5AP41221 380 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 NPTX1Q15818 432 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 ZRANB3Q5FWF4 1079 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 TECRLQ5HYJ1 363 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 C11orf88Q6PI97 169 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 DZIP1Q86YF9 867 aaKnown RBP4.31□□□□□ -1.72
LINC00560-201ENST00000564593 LGI2Q8N0V4 545 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 CORO2AQ92828 525 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 FAM71F1Q96KD3 344 aaPredicted RBP4.31□□□□□ -1.72
LINC00560-201ENST00000564593 FAM20AQ96MK3 541 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 SDR39U1Q9NRG7 319 aaPredicted RBP4.31□□□□□ -1.72
LINC00560-201ENST00000564593 DDX43Q9NXZ2 648 aaKnown RBP4.31□□□□□ -1.72
LINC00560-201ENST00000564593 ACAD8Q9UKU7 415 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 KCNK7Q9Y2U2 307 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 ZFP37Q9Y6Q3 630 aaPredicted RBP4.31□□□□□ -1.72
LINC00560-201ENST00000564593 SMARCA4P51532 1647 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 TOP2AP11388 1531 aaKnown RBP4.31□□□□□ -1.72
LINC00560-201ENST00000564593 A0A1W2PPW3 197 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 DNM1LO00429 736 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 PSMD14O00487 310 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 SLC7A4O43246 635 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 RPS6KA5O75582 802 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 IGHV4-38-2P0DP08 117 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 LIFP15018 202 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 DCTP40126 519 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 RGS7P49802 495 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 MTCP1P56278 107 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 RRS1Q15050 365 aaKnown RBP4.31□□□□□ -1.72
LINC00560-201ENST00000564593 ZRSR1Q15695 479 aaKnown RBP4.31□□□□□ -1.72
LINC00560-201ENST00000564593 LACTB2Q53H82 288 aaPredicted RBP4.31□□□□□ -1.72
LINC00560-201ENST00000564593 NHSL2Q5HYW2 709 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 WDR38Q5JTN6 314 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 SLC27A1Q6PCB7 646 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 SLC26A9Q7LBE3 791 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 RTN4RL2Q86UN3 420 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 KLHL7Q8IXQ5 586 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 MMD2Q8IY49 270 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 EID3Q8N140 333 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 MAPKAPK5-AS1Q8N8E1 139 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 GDAP1Q8TB36 358 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 GRAPLQ8TC17 118 aaPredicted RBP4.31□□□□□ -1.72
LINC00560-201ENST00000564593 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.31□□□□□ -1.72
LINC00560-201ENST00000564593 PHLDA1Q8WV24 401 aaPredicted RBP4.31□□□□□ -1.72
LINC00560-201ENST00000564593 PIGBQ92521 554 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 ST6GALNAC6Q969X2 333 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 EPYCQ99645 322 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 PANK2Q9BZ23 570 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 SNX25Q9H3E2 840 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 Q9H8V8 135 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 COPS7BQ9H9Q2 264 aaPredicted RBP4.31□□□□□ -1.72
LINC00560-201ENST00000564593 GSN-AS1Q9NRJ2 163 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 RIPK3Q9Y572 518 aa4.31□□□□□ -1.72
LINC00560-201ENST00000564593 IGLV9-49A0A0B4J1Y8 123 aa4.3□□□□□ -1.72
LINC00560-201ENST00000564593 LOC101059948A0A1B0GTJ6 334 aa4.3□□□□□ -1.72
LINC00560-201ENST00000564593 P2RY10O00398 339 aa4.3□□□□□ -1.72
LINC00560-201ENST00000564593 TSHBP01222 138 aa4.3□□□□□ -1.72
LINC00560-201ENST00000564593 PAX1P15863 534 aa4.3□□□□□ -1.72
LINC00560-201ENST00000564593 KRT2P35908 639 aa4.3□□□□□ -1.72
LINC00560-201ENST00000564593 ALDH3A2P51648 485 aa4.3□□□□□ -1.72
LINC00560-201ENST00000564593 DLX5P56178 289 aa4.3□□□□□ -1.72
LINC00560-201ENST00000564593 GSDMDP57764 484 aa4.3□□□□□ -1.72
LINC00560-201ENST00000564593 B3GALT5-AS1P59052 145 aa4.3□□□□□ -1.72
LINC00560-201ENST00000564593 PTENP60484 403 aa4.3□□□□□ -1.72
LINC00560-201ENST00000564593 TUBB4BP68371 445 aa4.3□□□□□ -1.72
LINC00560-201ENST00000564593 TAF10Q12962 218 aa4.3□□□□□ -1.72
LINC00560-201ENST00000564593 RBBP5Q15291 538 aaKnown RBP4.3□□□□□ -1.72
LINC00560-201ENST00000564593 TAF13Q15543 124 aa4.3□□□□□ -1.72
LINC00560-201ENST00000564593 PHKG1Q16816 387 aa4.3□□□□□ -1.72
LINC00560-201ENST00000564593 TWISTNBQ3B726 338 aaPredicted RBP4.3□□□□□ -1.72
LINC00560-201ENST00000564593 FAM174BQ3ZCQ3 159 aa4.3□□□□□ -1.72
LINC00560-201ENST00000564593 FAM76BQ5HYJ3 339 aa4.3□□□□□ -1.72
LINC00560-201ENST00000564593 C19orf48Q6RUI8 117 aa4.3□□□□□ -1.72
LINC00560-201ENST00000564593 NRARPQ7Z6K4 114 aa4.3□□□□□ -1.72
LINC00560-201ENST00000564593 NDUFAF2Q8N183 169 aa4.3□□□□□ -1.72
LINC00560-201ENST00000564593 RASGEF1AQ8N9B8 481 aa4.3□□□□□ -1.72
LINC00560-201ENST00000564593 ZNF383Q8NA42 475 aa4.3□□□□□ -1.72
LINC00560-201ENST00000564593 RAD54LQ92698 747 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms