RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 OR2B3O76000 313 aa13.17□□□□□ -0.3
CNOT1-206ENST00000564557 AHSGP02765 367 aa13.17□□□□□ -0.3
CNOT1-206ENST00000564557 ITGB2P05107 769 aa13.17□□□□□ -0.3
CNOT1-206ENST00000564557 PRKAR1AP10644 381 aa13.17□□□□□ -0.3
CNOT1-206ENST00000564557 MAGP20916 626 aa13.17□□□□□ -0.3
CNOT1-206ENST00000564557 AGXTP21549 392 aa13.17□□□□□ -0.3
CNOT1-206ENST00000564557 MCM3P25205 808 aa13.17□□□□□ -0.3
CNOT1-206ENST00000564557 RPA3P35244 121 aaPredicted RBP13.17□□□□□ -0.3
CNOT1-206ENST00000564557 CYP4F2P78329 520 aa13.17□□□□□ -0.3
CNOT1-206ENST00000564557 MGAT5Q09328 741 aa13.17□□□□□ -0.3
CNOT1-206ENST00000564557 DNASE1L3Q13609 305 aa13.17□□□□□ -0.3
CNOT1-206ENST00000564557 GRB7Q14451 532 aa13.17□□□□□ -0.3
CNOT1-206ENST00000564557 GBX1Q14549 363 aa13.17□□□□□ -0.3
CNOT1-206ENST00000564557 NAA25Q14CX7 972 aa13.17□□□□□ -0.3
CNOT1-206ENST00000564557 CCSMST1Q4G0I0 132 aa13.17□□□□□ -0.3
CNOT1-206ENST00000564557 SOWAHCQ53LP3 525 aaPredicted RBP13.17□□□□□ -0.3
CNOT1-206ENST00000564557 ZC3H12BQ5HYM0 836 aaKnown RBP13.17□□□□□ -0.3
CNOT1-206ENST00000564557 ADGRD1Q6QNK2 874 aa13.17□□□□□ -0.3
CNOT1-206ENST00000564557 CNTN4Q8IWV2 1026 aa13.17□□□□□ -0.3
CNOT1-206ENST00000564557 CPNE9Q8IYJ1 553 aa13.17□□□□□ -0.3
CNOT1-206ENST00000564557 MYO1HQ8N1T3 1032 aa13.17□□□□□ -0.3
CNOT1-206ENST00000564557 LINC01555Q8NAE3 123 aa13.17□□□□□ -0.3
CNOT1-206ENST00000564557 OR1L3Q8NH93 324 aa13.17□□□□□ -0.3
CNOT1-206ENST00000564557 STARD8Q92502 1023 aa13.17□□□□□ -0.3
CNOT1-206ENST00000564557 CDKL2Q92772 493 aa13.17□□□□□ -0.3
CNOT1-206ENST00000564557 SLC30A3Q99726 388 aa13.17□□□□□ -0.3
CNOT1-206ENST00000564557 CHRNA10Q9GZZ6 450 aa13.17□□□□□ -0.3
CNOT1-206ENST00000564557 SAYSD1Q9NPB0 183 aa13.17□□□□□ -0.3
CNOT1-206ENST00000564557 NSMCE4AQ9NXX6 385 aa13.17□□□□□ -0.3
CNOT1-206ENST00000564557 TXNDC16Q9P2K2 825 aa13.17□□□□□ -0.3
CNOT1-206ENST00000564557 CORO1CQ9ULV4 474 aaPredicted RBP13.17□□□□□ -0.3
CNOT1-206ENST00000564557 PLCL2Q9UPR0 1127 aa13.17□□□□□ -0.3
CNOT1-206ENST00000564557 AP1M2Q9Y6Q5 423 aa13.17□□□□□ -0.3
CNOT1-206ENST00000564557 DSPP15924 2871 aaKnown RBP13.16□□□□□ -0.3
CNOT1-206ENST00000564557 ZZEF1O43149 2961 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 ARHGEF33A8MVX0 844 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 C21orf140B9A014 251 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 E7ESA3 106 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 EIF3HO15372 352 aaKnown RBP eCLIP13.16□□□□□ -0.32e-7■■□□□ 14
CNOT1-206ENST00000564557 ZNF749O43361 778 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 HIST1H2AGP0C0S8 130 aaPredicted RBP13.16□□□□□ -0.3
CNOT1-206ENST00000564557 WT1P19544 449 aaPredicted RBP13.16□□□□□ -0.3
CNOT1-206ENST00000564557 HIST1H2ADP20671 130 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 CMPK1P30085 196 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 PEBP1P30086 187 aaKnown RBP13.16□□□□□ -0.3
CNOT1-206ENST00000564557 PLTPP55058 493 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 ARHGAP19Q14CB8 494 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 WHAMMP3Q1A5X7 153 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 DEFB110Q30KQ9 67 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 THEMIS2Q5TEJ8 643 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 STEAP4Q687X5 459 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 DUPD1Q68J44 220 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 FAM45BPQ6NSW5 357 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 C8orf74Q6P047 294 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 TLDC1Q6P9B6 456 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 TRMT10BQ6PF06 316 aaKnown RBP13.16□□□□□ -0.3
CNOT1-206ENST00000564557 FIGLAQ6QHK4 219 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 CAPN12Q6ZSI9 719 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 UBE2R2Q712K3 238 aaPredicted RBP13.16□□□□□ -0.3
CNOT1-206ENST00000564557 GALNT7Q86SF2 657 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 FAM20CQ8IXL6 584 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 SYTL1Q8IYJ3 562 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 LMNTD1Q8N9Z9 388 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 MNS1Q8NEH6 495 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 HMGCLL1Q8TB92 370 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 FAM45AQ8TCE6 357 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 CD200R1Q8TD46 325 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 MCOLN3Q8TDD5 553 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 DENND1AQ8TEH3 1009 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 CT55Q8WUE5 264 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 SMPDL3AQ92484 453 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 SEC14L1Q92503 715 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 EXTL1Q92935 676 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 ZUFSPQ96AP4 578 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 HIST1H2AHQ96KK5 128 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 LRFN5Q96NI6 719 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 MIPEPQ99797 713 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 HIST1H2AJQ99878 128 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 H2AFJQ9BTM1 129 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 MENTQ9BUN1 341 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 SLC12A9Q9BXP2 914 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 GPR87Q9BY21 358 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 FAM60AQ9NP50 221 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 TXLNGQ9NUQ3 528 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 ABCF3Q9NUQ8 709 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 UTP6Q9NYH9 597 aaKnown RBP13.16□□□□□ -0.3
CNOT1-206ENST00000564557 IL17BQ9UHF5 180 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 KLHL20Q9Y2M5 609 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 VWA7Q9Y334 891 aa13.16□□□□□ -0.3
CNOT1-206ENST00000564557 TARM1B6A8C7 271 aa13.15□□□□□ -0.3
CNOT1-206ENST00000564557 C9J4A7 227 aa13.15□□□□□ -0.3
CNOT1-206ENST00000564557 MEN1O00255 615 aa13.15□□□□□ -0.3
CNOT1-206ENST00000564557 NKX2-8O15522 239 aa13.15□□□□□ -0.3
CNOT1-206ENST00000564557 CCNDBP1O95273 360 aa13.15□□□□□ -0.3
CNOT1-206ENST00000564557 C8GP07360 202 aa13.15□□□□□ -0.3
CNOT1-206ENST00000564557 SAT1P21673 171 aa13.15□□□□□ -0.3
CNOT1-206ENST00000564557 PNLIPRP1P54315 467 aa13.15□□□□□ -0.3
CNOT1-206ENST00000564557 IL2P60568 153 aa13.15□□□□□ -0.3
CNOT1-206ENST00000564557 ILF2Q12905 390 aaKnown RBP13.15□□□□□ -0.3
CNOT1-206ENST00000564557 FRG1Q14331 258 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms