RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 PRPF31Q8WWY3 499 aaKnown RBP4.08□□□□□ -1.76
UBR1-205ENST00000564540 JAKMIP2Q96AA8 810 aa4.08□□□□□ -1.76
UBR1-205ENST00000564540 NXNL1Q96CM4 212 aa4.08□□□□□ -1.76
UBR1-205ENST00000564540 TMCO6Q96DC7 493 aa4.08□□□□□ -1.76
UBR1-205ENST00000564540 MIS12Q9H081 205 aa4.08□□□□□ -1.76
UBR1-205ENST00000564540 WNT5BQ9H1J7 359 aa4.08□□□□□ -1.76
UBR1-205ENST00000564540 RPS10P5Q9NQ39 176 aa4.08□□□□□ -1.76
UBR1-205ENST00000564540 FAM207AQ9NSI2 230 aaPredicted RBP4.08□□□□□ -1.76
UBR1-205ENST00000564540 PANK4Q9NVE7 773 aa4.08□□□□□ -1.76
UBR1-205ENST00000564540 STUB1Q9UNE7 303 aa4.08□□□□□ -1.76
UBR1-205ENST00000564540 TMED3Q9Y3Q3 217 aa4.08□□□□□ -1.76
UBR1-205ENST00000564540 PI15O43692 258 aa4.07□□□□□ -1.76
UBR1-205ENST00000564540 SH3BP5O60239 455 aa4.07□□□□□ -1.76
UBR1-205ENST00000564540 BEST1O76090 585 aa4.07□□□□□ -1.76
UBR1-205ENST00000564540 CYP2A7P20853 494 aa4.07□□□□□ -1.76
UBR1-205ENST00000564540 ACTN2P35609 894 aa4.07□□□□□ -1.76
UBR1-205ENST00000564540 HNF4AP41235 474 aa4.07□□□□□ -1.76
UBR1-205ENST00000564540 CLNS1AP54105 237 aaKnown RBP4.07□□□□□ -1.76
UBR1-205ENST00000564540 STK4Q13043 487 aa4.07□□□□□ -1.76
UBR1-205ENST00000564540 TNIP1Q15025 636 aa4.07□□□□□ -1.76
UBR1-205ENST00000564540 SNAPC1Q16533 368 aa4.07□□□□□ -1.76
UBR1-205ENST00000564540 SLC25A47Q6Q0C1 308 aa4.07□□□□□ -1.76
UBR1-205ENST00000564540 LRRTM1Q86UE6 522 aa4.07□□□□□ -1.76
UBR1-205ENST00000564540 NUDT13Q86X67 352 aa4.07□□□□□ -1.76
UBR1-205ENST00000564540 GPRC5AQ8NFJ5 357 aa4.07□□□□□ -1.76
UBR1-205ENST00000564540 OR10S1Q8NGN2 331 aa4.07□□□□□ -1.76
UBR1-205ENST00000564540 OR13C3Q8NGS6 347 aa4.07□□□□□ -1.76
UBR1-205ENST00000564540 CFAP61Q8NHU2 1237 aa4.07□□□□□ -1.76
UBR1-205ENST00000564540 SYN2Q92777 582 aaPredicted RBP4.07□□□□□ -1.76
UBR1-205ENST00000564540 PTERQ96BW5 349 aa4.07□□□□□ -1.76
UBR1-205ENST00000564540 ZNF486Q96H40 463 aaPredicted RBP4.07□□□□□ -1.76
UBR1-205ENST00000564540 C10orf90Q96M02 699 aa4.07□□□□□ -1.76
UBR1-205ENST00000564540 NSMCE3Q96MG7 304 aa4.07□□□□□ -1.76
UBR1-205ENST00000564540 FAM20AQ96MK3 541 aa4.07□□□□□ -1.76
UBR1-205ENST00000564540 SFXN2Q96NB2 322 aa4.07□□□□□ -1.76
UBR1-205ENST00000564540 NECTIN4Q96NY8 510 aa4.07□□□□□ -1.76
UBR1-205ENST00000564540 MXD3Q9BW11 206 aa4.07□□□□□ -1.76
UBR1-205ENST00000564540 THAP2Q9H0W7 228 aa4.07□□□□□ -1.76
UBR1-205ENST00000564540 UPF3AQ9H1J1 476 aaKnown RBP4.07□□□□□ -1.76
UBR1-205ENST00000564540 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.07□□□□□ -1.76
UBR1-205ENST00000564540 SPHK2Q9NRA0 654 aa4.07□□□□□ -1.76
UBR1-205ENST00000564540 MAN2C1Q9NTJ4 1040 aa4.07□□□□□ -1.76
UBR1-205ENST00000564540 OR6C2Q9NZP2 312 aa4.07□□□□□ -1.76
UBR1-205ENST00000564540 MRPL15Q9P015 296 aaKnown RBP4.07□□□□□ -1.76
UBR1-205ENST00000564540 FBXO2Q9UK22 296 aaPredicted RBP4.07□□□□□ -1.76
UBR1-205ENST00000564540 TDRD15B5MCY1 1934 aaKnown RBP4.07□□□□□ -1.76
UBR1-205ENST00000564540 C2orf81A6NN90 581 aa4.06□□□□□ -1.76
UBR1-205ENST00000564540 C15orf61A6NNL5 157 aa4.06□□□□□ -1.76
UBR1-205ENST00000564540 GFPT2O94808 682 aa4.06□□□□□ -1.76
UBR1-205ENST00000564540 PGM3O95394 542 aa4.06□□□□□ -1.76
UBR1-205ENST00000564540 TRIM49P0CI25 452 aa4.06□□□□□ -1.76
UBR1-205ENST00000564540 TRIM49CP0CI26 452 aa4.06□□□□□ -1.76
UBR1-205ENST00000564540 HAPLN1P10915 354 aaPredicted RBP4.06□□□□□ -1.76
UBR1-205ENST00000564540 GATA1P15976 413 aaPredicted RBP4.06□□□□□ -1.76
UBR1-205ENST00000564540 UGT1A4P22310 534 aa4.06□□□□□ -1.76
UBR1-205ENST00000564540 LBX1P52954 281 aa4.06□□□□□ -1.76
UBR1-205ENST00000564540 EIF5P55010 431 aaKnown RBP4.06□□□□□ -1.76
UBR1-205ENST00000564540 BAATQ14032 418 aaPredicted RBP4.06□□□□□ -1.76
UBR1-205ENST00000564540 UGT3A2Q3SY77 523 aa4.06□□□□□ -1.76
UBR1-205ENST00000564540 CBWD6Q4V339 395 aa4.06□□□□□ -1.76
UBR1-205ENST00000564540 C2CD6Q53TS8 623 aa4.06□□□□□ -1.76
UBR1-205ENST00000564540 CBWD3Q5JTY5 395 aa4.06□□□□□ -1.76
UBR1-205ENST00000564540 HYIQ5T013 277 aa4.06□□□□□ -1.76
UBR1-205ENST00000564540 WLSQ5T9L3 541 aa4.06□□□□□ -1.76
UBR1-205ENST00000564540 KRTAP5-2Q701N4 177 aa4.06□□□□□ -1.76
UBR1-205ENST00000564540 THAP8Q8NA92 274 aa4.06□□□□□ -1.76
UBR1-205ENST00000564540 ZNF519Q8TB69 540 aa4.06□□□□□ -1.76
UBR1-205ENST00000564540 PIGBQ92521 554 aa4.06□□□□□ -1.76
UBR1-205ENST00000564540 SLCO2A1Q92959 643 aa4.06□□□□□ -1.76
UBR1-205ENST00000564540 SLAMF9Q96A28 289 aa4.06□□□□□ -1.76
UBR1-205ENST00000564540 OMA1Q96E52 524 aa4.06□□□□□ -1.76
UBR1-205ENST00000564540 ZNF300Q96RE9 604 aaPredicted RBP4.06□□□□□ -1.76
UBR1-205ENST00000564540 USP28Q96RU2 1077 aa4.06□□□□□ -1.76
UBR1-205ENST00000564540 ABHD1Q96SE0 405 aa4.06□□□□□ -1.76
UBR1-205ENST00000564540 KRT12Q99456 494 aa4.06□□□□□ -1.76
UBR1-205ENST00000564540 PPANQ9NQ55 473 aaKnown RBP4.06□□□□□ -1.76
UBR1-205ENST00000564540 GDE1Q9NZC3 331 aa4.06□□□□□ -1.76
UBR1-205ENST00000564540 TMEM5Q9Y2B1 443 aa4.06□□□□□ -1.76
UBR1-205ENST00000564540 TRIM17Q9Y577 477 aa4.06□□□□□ -1.76
UBR1-205ENST00000564540 A0A1W2PR80 420 aa4.05□□□□□ -1.76
UBR1-205ENST00000564540 GLOD5A6NK44 160 aa4.05□□□□□ -1.76
UBR1-205ENST00000564540 GLRA3O75311 464 aa4.05□□□□□ -1.76
UBR1-205ENST00000564540 CDK2AP2O75956 126 aa4.05□□□□□ -1.76
UBR1-205ENST00000564540 SEC24AO95486 1093 aa4.05□□□□□ -1.76
UBR1-205ENST00000564540 PDLIM3Q53GG5 364 aaPredicted RBP4.05□□□□□ -1.76
UBR1-205ENST00000564540 C11orf63Q6NUN7 778 aa4.05□□□□□ -1.76
UBR1-205ENST00000564540 NUP54Q7Z3B4 507 aa4.05□□□□□ -1.76
UBR1-205ENST00000564540 MMD2Q8IY49 270 aa4.05□□□□□ -1.76
UBR1-205ENST00000564540 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.05□□□□□ -1.76
UBR1-205ENST00000564540 OR1L3Q8NH93 324 aa4.05□□□□□ -1.76
UBR1-205ENST00000564540 THOC1Q96FV9 657 aaKnown RBP4.05□□□□□ -1.76
UBR1-205ENST00000564540 MYNNQ9NPC7 610 aa4.05□□□□□ -1.76
UBR1-205ENST00000564540 PRMT7Q9NVM4 692 aaPredicted RBP4.05□□□□□ -1.76
UBR1-205ENST00000564540 ABT1Q9ULW3 272 aaKnown RBP4.05□□□□□ -1.76
UBR1-205ENST00000564540 EPHB6O15197 1021 aa4.04□□□□□ -1.76
UBR1-205ENST00000564540 IPO8O15397 1037 aaKnown RBP4.04□□□□□ -1.76
UBR1-205ENST00000564540 IGHV2-70P01814 119 aa4.04□□□□□ -1.76
UBR1-205ENST00000564540 PFKFB1P16118 471 aa4.04□□□□□ -1.76
UBR1-205ENST00000564540 LHCGRP22888 699 aa4.04□□□□□ -1.76
UBR1-205ENST00000564540 GATA2P23769 480 aaPredicted RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms