RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 KLK2P20151 261 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 GCGRP47871 477 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 EMP2P54851 167 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 XIAPP98170 497 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 ALDH6A1Q02252 535 aaKnown RBP6.99□□□□□ -1.29
VPS4A-203ENST00000564399 ZNF33BQ06732 778 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 MPP3Q13368 585 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 TAF1AQ15573 450 aaPredicted RBP6.99□□□□□ -1.29
VPS4A-203ENST00000564399 FILIP1LQ4L180 1135 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 KRTCAP3Q53RY4 240 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 ZNF766Q5HY98 468 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 ATG9BQ674R7 924 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 ALKBH5Q6P6C2 394 aaKnown RBP6.99□□□□□ -1.29
VPS4A-203ENST00000564399 FIGLAQ6QHK4 219 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 SASS6Q6UVJ0 657 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 RIPOR1Q6ZS17 1223 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 BZW1Q7L1Q6 419 aaKnown RBP6.99□□□□□ -1.29
VPS4A-203ENST00000564399 TAS2R42Q7RTR8 314 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 SNX20Q7Z614 316 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 TGIF2LYQ8IUE0 185 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 TBC1D21Q8IYX1 336 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 DTWD1Q8N5C7 304 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 OR13C4Q8NGS5 318 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 TFB1MQ8WVM0 346 aaKnown RBP6.99□□□□□ -1.29
VPS4A-203ENST00000564399 RNF25Q96BH1 459 aaPredicted RBP6.99□□□□□ -1.29
VPS4A-203ENST00000564399 OXNAD1Q96HP4 312 aaPredicted RBP6.99□□□□□ -1.29
VPS4A-203ENST00000564399 FCRL5Q96RD9 977 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 FICDQ9BVA6 458 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 YIPF2Q9BWQ6 316 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 RTN4Q9NQC3 1192 aaKnown RBP6.99□□□□□ -1.29
VPS4A-203ENST00000564399 INTS7Q9NVH2 962 aaKnown RBP6.99□□□□□ -1.29
VPS4A-203ENST00000564399 RIC8BQ9NVN3 520 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 ANO10Q9NW15 660 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 ZDHHC3Q9NYG2 299 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 COQ3Q9NZJ6 369 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 RSPH14Q9UHP6 348 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 NPIPA1Q9UND3 350 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 ZNF835Q9Y2P0 537 aa6.99□□□□□ -1.29
VPS4A-203ENST00000564399 BZW2Q9Y6E2 419 aaKnown RBP6.99□□□□□ -1.29
VPS4A-203ENST00000564399 A0A087X0T9 212 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 HYKKA2RU49 373 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 AGAP14A8MT82 685 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 A8MUI8 341 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 ZNF487B1APH4 448 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 IDSB3KWA1 339 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 CCL22O00626 93 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 LIN7AO14910 233 aaPredicted RBP6.98□□□□□ -1.29
VPS4A-203ENST00000564399 CRTAMO95727 393 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 AP2A1O95782 977 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 KRT1P04264 644 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 FAM228BP0C875 321 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 TPBGLP0DKB5 382 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 ITGAMP11215 1152 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 PYGBP11216 843 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 PEBP1P30086 187 aaKnown RBP6.98□□□□□ -1.29
VPS4A-203ENST00000564399 DNAJA1P31689 397 aaKnown RBP6.98□□□□□ -1.29
VPS4A-203ENST00000564399 IST1P53990 364 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 VSX2P58304 361 aaPredicted RBP6.98□□□□□ -1.29
VPS4A-203ENST00000564399 AP2B1P63010 937 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 CACNG1Q06432 222 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 WASHC5Q12768 1159 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 OLIG2Q13516 323 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 MESDQ14696 234 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 GPR33Q49SQ1 333 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 ZNF658BQ4V348 819 aaPredicted RBP6.98□□□□□ -1.29
VPS4A-203ENST00000564399 SYTL3Q4VX76 610 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 WASHC2DQ5SRD0 308 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 C3P1Q6ZMU1 363 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 Q6ZPB1 254 aaPredicted RBP6.98□□□□□ -1.29
VPS4A-203ENST00000564399 NEK10Q6ZWH5 1172 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 LAPTM4BQ86VI4 370 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 TAX1BP1Q86VP1 789 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 SERPINA9Q86WD7 417 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 EID3Q8N140 333 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 ZNF567Q8N184 647 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 TAB3Q8N5C8 712 aaPredicted RBP6.98□□□□□ -1.29
VPS4A-203ENST00000564399 C2orf73Q8N5S3 287 aaPredicted RBP6.98□□□□□ -1.29
VPS4A-203ENST00000564399 CLDN19Q8N6F1 224 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 DNAAF3Q8N9W5 541 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 OR5K2Q8NHB8 316 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 AGAP11Q8TF27 550 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 THAP3Q8WTV1 239 aaPredicted RBP6.98□□□□□ -1.29
VPS4A-203ENST00000564399 ELMO1Q92556 727 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 SLC22A18Q96BI1 424 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 GPR137Q96N19 417 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 APOL2Q9BQE5 337 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 ZNF559Q9BR84 538 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 TMEM121Q9BTD3 319 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 RNF32Q9H0A6 362 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 HSD3B7Q9H2F3 369 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 GSX1Q9H4S2 264 aaPredicted RBP6.98□□□□□ -1.29
VPS4A-203ENST00000564399 KLHL1Q9NR64 748 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 UVRAGQ9P2Y5 699 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 SAE1Q9UBE0 346 aaPredicted RBP6.98□□□□□ -1.29
VPS4A-203ENST00000564399 ZC3H7BQ9UGR2 993 aaKnown RBP6.98□□□□□ -1.29
VPS4A-203ENST00000564399 LCMT1Q9UIC8 334 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 TEKT2Q9UIF3 430 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 PPT2Q9UMR5 302 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 DNHD1Q96M86 4753 aa6.98□□□□□ -1.29
VPS4A-203ENST00000564399 SCN3AQ9NY46 2000 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms