RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	OCSTAMP	Q9BR26	566 aa		4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	SLC27A5	Q9Y2P5	690 aa		4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	ZNF318	Q5VUA4	2279 aa		4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	VEGFA	P15692	232 aa	Predicted RBP	4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	RPL7A	P62424	266 aa	Known RBP	4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	CD47	Q08722	323 aa		4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	LCP2	Q13094	533 aa		4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	ASAH1	Q13510	395 aa		4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	SIX1	Q15475	284 aa	Predicted RBP	4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	FAM83A	Q86UY5	434 aa		4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	ZDHHC21	Q8IVQ6	265 aa		4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	TTC16	Q8NEE8	873 aa		4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	SDR39U1	Q9NRG7	319 aa	Predicted RBP	4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	NUDT15	Q9NV35	164 aa		4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	PRAMEF1	O95521	474 aa		4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	PON3	Q15166	354 aa		4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	DCLRE1A	Q6PJP8	1040 aa		4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	LCLAT1	Q6UWP7	414 aa		4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	SIAH1	Q8IUQ4	282 aa		4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	OR6F1	Q8NGZ6	308 aa		4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	CNTNAP1	P78357	1384 aa		4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	F5	P12259	2224 aa		4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	FAM149A	A5PLN7	773 aa		4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	TSPAN8	P19075	237 aa		4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	DPP6	P42658	865 aa		4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	DCAF12L1	Q5VU92	463 aa		4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	PLAG1	Q6DJT9	500 aa		4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	CDKN2AIPNL	Q96HQ2	116 aa		4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	TPD52L3	Q96J77	140 aa		4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	DPCD	Q9BVM2	203 aa	Predicted RBP	4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	SLC7A4	O43246	635 aa		4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	SPARC	P09486	303 aa		4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	RPS19	P39019	145 aa	Known RBP	4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	OR56B4	Q8NH76	319 aa		4.17	□□□□□ -1.74
MACF1-231	ENST00000564288	ZNF607	Q96SK3	696 aa		4.17	□□□□□ -1.74
MACF1-231	ENST00000564288		C9IYK1	514 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	ODC1	P11926	461 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	PAN2	Q504Q3	1202 aa	Known RBP	4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	NCEH1	Q6PIU2	408 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	CERS6	Q6ZMG9	384 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	MON1B	Q7L1V2	547 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	RAB11FIP2	Q7L804	512 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	MAP4K3	Q8IVH8	894 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	CAMKV	Q8NCB2	501 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	DCLRE1C	Q96SD1	692 aa	Known RBP	4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	SLC25A32	Q9H2D1	315 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	NIT2	Q9NQR4	276 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	CNOT2	Q9NZN8	540 aa	Known RBP	4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	DCLK1	O15075	740 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	ZNF7	P17097	686 aa	Predicted RBP	4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	RBBP4	Q09028	425 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	FAM171B	Q6P995	826 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	ADAMTS14	Q8WXS8	1223 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	ATXN7L3B	Q96GX2	97 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	TARS2	Q9BW92	718 aa	Known RBP	4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	SDCBP2	Q9H190	292 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	DPEP3	Q9H4B8	488 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	DPP7	Q9UHL4	492 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288		A0A1W2PPL8	197 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	TGM1	P22735	817 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	CASP7	P55210	303 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	SPOCK1	Q08629	439 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	CLLU1	Q5K131	121 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	SLC22A25	Q6T423	547 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288		Q8N402	240 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	OR52K2	Q8NGK3	314 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	RIMS3	Q9UJD0	308 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	INTS6	Q9UL03	887 aa	Known RBP	4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	APC2	O95996	2303 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	KANTR	A0A1W2PQU2	76 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	OIP5	O43482	229 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	SLC37A4	O43826	429 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	HTR3B	O95264	441 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	GLUD2	P49448	558 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	CAP1	Q01518	475 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	RPL6	Q02878	288 aa	Known RBP	4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	CREB5	Q02930	508 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	MICA	Q29983	383 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	GPR158	Q5T848	1215 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	IL27RA	Q6UWB1	636 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	THAP7	Q9BT49	309 aa	Predicted RBP	4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	LATS2	Q9NRM7	1088 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	TRPV2	Q9Y5S1	764 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	HOXA2	O43364	376 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	TAF13	Q15543	124 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	OAF	Q86UD1	273 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	MYNN	Q9NPC7	610 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	ZSCAN32	Q9NX65	697 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	SPHK1	Q9NYA1	384 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	CREG1	O75629	220 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	B2M	P61769	119 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	BLOC1S1	P78537	153 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	TMEM135	Q86UB9	458 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	LRTM1	Q9HBL6	345 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	ZNF490	Q9ULM2	529 aa	Predicted RBP	4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	FARSA	Q9Y285	508 aa	Known RBP	4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	PARP4	Q9UKK3	1724 aa	Known RBP	4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	DISC1	C4P0D8	188 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	DCDC1	P59894	354 aa		4.16	□□□□□ -1.74
MACF1-231	ENST00000564288	CYBRD1	Q53TN4	286 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms