RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 RAB17Q9H0T7 212 aa19.13■□□□□ 0.65
CMTM3-207ENST00000564060 FAM60AQ9NP50 221 aa19.13■□□□□ 0.65
CMTM3-207ENST00000564060 SRPK3Q9UPE1 567 aa19.13■□□□□ 0.65
CMTM3-207ENST00000564060 MED16Q9Y2X0 877 aa19.13■□□□□ 0.65
CMTM3-207ENST00000564060 UTP11Q9Y3A2 253 aaKnown RBP19.13■□□□□ 0.65
CMTM3-207ENST00000564060 HEATR5BQ9P2D3 2071 aa19.13■□□□□ 0.65
CMTM3-207ENST00000564060 SEC16AO15027 2179 aa19.13■□□□□ 0.65
CMTM3-207ENST00000564060 ARHGEF33A8MVX0 844 aa19.12■□□□□ 0.65
CMTM3-207ENST00000564060 E7ESA3 106 aa19.12■□□□□ 0.65
CMTM3-207ENST00000564060 MYO1CO00159 1063 aa19.12■□□□□ 0.65
CMTM3-207ENST00000564060 MEN1O00255 615 aa19.12■□□□□ 0.65
CMTM3-207ENST00000564060 ZBTB14O43829 449 aa19.12■□□□□ 0.65
CMTM3-207ENST00000564060 ERGP11308 486 aa19.12■□□□□ 0.65
CMTM3-207ENST00000564060 C2orf54Q08AI8 447 aa19.12■□□□□ 0.65
CMTM3-207ENST00000564060 CBLBQ13191 982 aa19.12■□□□□ 0.65
CMTM3-207ENST00000564060 GPS2Q13227 327 aa19.12■□□□□ 0.65
CMTM3-207ENST00000564060 CUL1Q13616 776 aa19.12■□□□□ 0.65
CMTM3-207ENST00000564060 TBR1Q16650 682 aa19.12■□□□□ 0.65
CMTM3-207ENST00000564060 CCSMST1Q4G0I0 132 aa19.12■□□□□ 0.65
CMTM3-207ENST00000564060 ZC3H12BQ5HYM0 836 aaKnown RBP19.12■□□□□ 0.65
CMTM3-207ENST00000564060 HP1BP3Q5SSJ5 553 aaPredicted RBP19.12■□□□□ 0.65
CMTM3-207ENST00000564060 ZNF517Q6ZMY9 492 aaPredicted RBP19.12■□□□□ 0.65
CMTM3-207ENST00000564060 C2orf73Q8N5S3 287 aaPredicted RBP19.12■□□□□ 0.65
CMTM3-207ENST00000564060 LMNTD1Q8N9Z9 388 aa19.12■□□□□ 0.65
CMTM3-207ENST00000564060 DENND1AQ8TEH3 1009 aa19.12■□□□□ 0.65
CMTM3-207ENST00000564060 ZUFSPQ96AP4 578 aa19.12■□□□□ 0.65
CMTM3-207ENST00000564060 SLC30A3Q99726 388 aa19.12■□□□□ 0.65
CMTM3-207ENST00000564060 C17orf62Q9BQA9 187 aa19.12■□□□□ 0.65
CMTM3-207ENST00000564060 IRAK4Q9NWZ3 460 aa19.12■□□□□ 0.65
CMTM3-207ENST00000564060 ZFATQ9P243 1243 aa19.12■□□□□ 0.65
CMTM3-207ENST00000564060 ATMQ13315 3056 aa19.11■□□□□ 0.65
CMTM3-207ENST00000564060 TARM1B6A8C7 271 aa19.11■□□□□ 0.65
CMTM3-207ENST00000564060 NKX2-8O15522 239 aa19.11■□□□□ 0.65
CMTM3-207ENST00000564060 ZSCAN9O15535 394 aaPredicted RBP19.11■□□□□ 0.65
CMTM3-207ENST00000564060 ZNF749O43361 778 aa19.11■□□□□ 0.65
CMTM3-207ENST00000564060 RAD51CO43502 376 aa19.11■□□□□ 0.65
CMTM3-207ENST00000564060 PRICKLE3O43900 615 aaPredicted RBP19.11■□□□□ 0.65
CMTM3-207ENST00000564060 CREG1O75629 220 aa19.11■□□□□ 0.65
CMTM3-207ENST00000564060 F7P08709 466 aaPredicted RBP19.11■□□□□ 0.65
CMTM3-207ENST00000564060 PRKAR1AP10644 381 aa19.11■□□□□ 0.65
CMTM3-207ENST00000564060 AGXTP21549 392 aa19.11■□□□□ 0.65
CMTM3-207ENST00000564060 F8A1P23610 371 aa19.11■□□□□ 0.65
CMTM3-207ENST00000564060 RORAP35398 523 aa19.11■□□□□ 0.65
CMTM3-207ENST00000564060 CCR10P46092 362 aa19.11■□□□□ 0.65
CMTM3-207ENST00000564060 GABRA4P48169 554 aa19.11■□□□□ 0.65
CMTM3-207ENST00000564060 C19orf57Q0VDD7 668 aa19.11■□□□□ 0.65
CMTM3-207ENST00000564060 ILF2Q12905 390 aaKnown RBP19.11■□□□□ 0.65
CMTM3-207ENST00000564060 ZIC1Q15915 447 aa19.11■□□□□ 0.65
CMTM3-207ENST00000564060 DEFB110Q30KQ9 67 aa19.11■□□□□ 0.65
CMTM3-207ENST00000564060 LINC00303Q3SY05 128 aa19.11■□□□□ 0.65
CMTM3-207ENST00000564060 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.11■□□□□ 0.65
CMTM3-207ENST00000564060 TEDDM1Q5T9Z0 273 aa19.11■□□□□ 0.65
CMTM3-207ENST00000564060 C16orf46Q6P387 395 aa19.11■□□□□ 0.65
CMTM3-207ENST00000564060 ZNF572Q7Z3I7 529 aaPredicted RBP19.11■□□□□ 0.65
CMTM3-207ENST00000564060 ANKMY2Q8IV38 441 aa19.11■□□□□ 0.65
CMTM3-207ENST00000564060 PALM2Q8IXS6 379 aa19.11■□□□□ 0.65
CMTM3-207ENST00000564060 CPNE9Q8IYJ1 553 aa19.11■□□□□ 0.65
CMTM3-207ENST00000564060 DNAJC22Q8N4W6 341 aa19.11■□□□□ 0.65
CMTM3-207ENST00000564060 FBXO36Q8NEA4 188 aa19.11■□□□□ 0.65
CMTM3-207ENST00000564060 SMPDL3AQ92484 453 aa19.11■□□□□ 0.65
CMTM3-207ENST00000564060 PWWP2AQ96N64 755 aa19.11■□□□□ 0.65
CMTM3-207ENST00000564060 NDNQ99608 321 aa19.11■□□□□ 0.65
CMTM3-207ENST00000564060 ADNPQ9H2P0 1102 aa19.11■□□□□ 0.65
CMTM3-207ENST00000564060 NSMCE4AQ9NXX6 385 aa19.11■□□□□ 0.65
CMTM3-207ENST00000564060 MRPS18BQ9Y676 258 aaKnown RBP19.11■□□□□ 0.65
CMTM3-207ENST00000564060 FER1L5A0AVI2 2057 aa19.11■□□□□ 0.65
CMTM3-207ENST00000564060 COL6A6A6NMZ7 2263 aa19.11■□□□□ 0.65
CMTM3-207ENST00000564060 C9J4A7 227 aa19.1■□□□□ 0.65
CMTM3-207ENST00000564060 TP73O15350 636 aa19.1■□□□□ 0.65
CMTM3-207ENST00000564060 EIF3HO15372 352 aaKnown RBP eCLIP19.1■□□□□ 0.65
CMTM3-207ENST00000564060 AHSGP02765 367 aa19.1■□□□□ 0.65
CMTM3-207ENST00000564060 RAB40ALP0C0E4 278 aa19.1■□□□□ 0.65
CMTM3-207ENST00000564060 PTPN4P29074 926 aa19.1■□□□□ 0.65
CMTM3-207ENST00000564060 CMPK1P30085 196 aa19.1■□□□□ 0.65
CMTM3-207ENST00000564060 CAV1Q03135 178 aa19.1■□□□□ 0.65
CMTM3-207ENST00000564060 MGAT5Q09328 741 aa19.1■□□□□ 0.65
CMTM3-207ENST00000564060 LY6DQ14210 128 aa19.1■□□□□ 0.65
CMTM3-207ENST00000564060 FIGLAQ6QHK4 219 aa19.1■□□□□ 0.65
CMTM3-207ENST00000564060 SYVN1Q86TM6 617 aa19.1■□□□□ 0.65
CMTM3-207ENST00000564060 SYTL1Q8IYJ3 562 aa19.1■□□□□ 0.65
CMTM3-207ENST00000564060 ZBED8Q8IZ13 594 aa19.1■□□□□ 0.65
CMTM3-207ENST00000564060 MYO1HQ8N1T3 1032 aa19.1■□□□□ 0.65
CMTM3-207ENST00000564060 SLC38A9Q8NBW4 561 aa19.1■□□□□ 0.65
CMTM3-207ENST00000564060 OR2L3Q8NG85 312 aa19.1■□□□□ 0.65
CMTM3-207ENST00000564060 PROKR1Q8TCW9 393 aa19.1■□□□□ 0.65
CMTM3-207ENST00000564060 ASB11Q8WXH4 323 aa19.1■□□□□ 0.65
CMTM3-207ENST00000564060 DLG3Q92796 817 aa19.1■□□□□ 0.65
CMTM3-207ENST00000564060 C16orf45Q96MC5 204 aaPredicted RBP19.1■□□□□ 0.65
CMTM3-207ENST00000564060 DPH5Q9H2P9 285 aa19.1■□□□□ 0.65
CMTM3-207ENST00000564060 ACTL8Q9H568 366 aa19.1■□□□□ 0.65
CMTM3-207ENST00000564060 TXLNGQ9NUQ3 528 aa19.1■□□□□ 0.65
CMTM3-207ENST00000564060 PCMTD2Q9NV79 361 aa19.1■□□□□ 0.65
CMTM3-207ENST00000564060 UTP6Q9NYH9 597 aaKnown RBP19.1■□□□□ 0.65
CMTM3-207ENST00000564060 EURLQ9NYK6 297 aa19.1■□□□□ 0.65
CMTM3-207ENST00000564060 KLK4Q9Y5K2 254 aa19.1■□□□□ 0.65
CMTM3-207ENST00000564060 MDC1Q14676 2089 aaKnown RBP19.09■□□□□ 0.65
CMTM3-207ENST00000564060 GFYI3L273 518 aa19.09■□□□□ 0.65
CMTM3-207ENST00000564060 CCNDBP1O95273 360 aa19.09■□□□□ 0.65
CMTM3-207ENST00000564060 C8GP07360 202 aa19.09■□□□□ 0.65
CMTM3-207ENST00000564060 MCM3P25205 808 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms