RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 COILP38432 576 aaPredicted RBP16.98■□□□□ 0.31
NME3-205ENST00000563854 RRADP55042 308 aa16.98■□□□□ 0.31
NME3-205ENST00000563854 TSTA3Q13630 321 aaPredicted RBP16.98■□□□□ 0.31
NME3-205ENST00000563854 THOC5Q13769 683 aaKnown RBP16.98■□□□□ 0.31
NME3-205ENST00000563854 DHX34Q14147 1143 aaKnown RBP16.98■□□□□ 0.31
NME3-205ENST00000563854 NADK2Q4G0N4 442 aa16.98■□□□□ 0.31
NME3-205ENST00000563854 FCRL6Q6DN72 434 aa16.98■□□□□ 0.31
NME3-205ENST00000563854 ZNF470Q6ECI4 717 aa16.98■□□□□ 0.31
NME3-205ENST00000563854 NEPROQ6NW34 567 aa16.98■□□□□ 0.31
NME3-205ENST00000563854 CCDC137Q6PK04 289 aaKnown RBP16.98■□□□□ 0.31
NME3-205ENST00000563854 TTLL10Q6ZVT0 673 aa16.98■□□□□ 0.31
NME3-205ENST00000563854 MRGPREQ86SM8 312 aa16.98■□□□□ 0.31
NME3-205ENST00000563854 CAND1Q86VP6 1230 aaKnown RBP16.98■□□□□ 0.31
NME3-205ENST00000563854 RASGEF1CQ8N431 466 aa16.98■□□□□ 0.31
NME3-205ENST00000563854 FDCSPQ8NFU4 85 aa16.98■□□□□ 0.31
NME3-205ENST00000563854 DLG3Q92796 817 aa16.98■□□□□ 0.31
NME3-205ENST00000563854 TCF12Q99081 682 aa16.98■□□□□ 0.31
NME3-205ENST00000563854 LUZP4Q9P127 313 aa16.98■□□□□ 0.31
NME3-205ENST00000563854 CTAGE9A4FU28 777 aa16.97■□□□□ 0.31
NME3-205ENST00000563854 KLF7O75840 302 aaPredicted RBP16.97■□□□□ 0.31
NME3-205ENST00000563854 PKMP14618 531 aaKnown RBP16.97■□□□□ 0.31
NME3-205ENST00000563854 CCNFP41002 786 aa16.97■□□□□ 0.31
NME3-205ENST00000563854 MAGEA6P43360 314 aa16.97■□□□□ 0.31
NME3-205ENST00000563854 ACSBG2Q5FVE4 666 aa16.97■□□□□ 0.31
NME3-205ENST00000563854 ZC3H12BQ5HYM0 836 aaKnown RBP16.97■□□□□ 0.31
NME3-205ENST00000563854 CENPUQ71F23 418 aa16.97■□□□□ 0.31
NME3-205ENST00000563854 MED25Q71SY5 747 aa16.97■□□□□ 0.31
NME3-205ENST00000563854 CILP2Q8IUL8 1156 aa16.97■□□□□ 0.31
NME3-205ENST00000563854 SLC35F6Q8N357 371 aa16.97■□□□□ 0.31
NME3-205ENST00000563854 METTL27Q8N6F8 245 aaPredicted RBP16.97■□□□□ 0.31
NME3-205ENST00000563854 TMEM102Q8N9M5 508 aaPredicted RBP16.97■□□□□ 0.31
NME3-205ENST00000563854 MAGEC3Q8TD91 643 aa16.97■□□□□ 0.31
NME3-205ENST00000563854 NAP1L3Q99457 506 aaPredicted RBP16.97■□□□□ 0.31
NME3-205ENST00000563854 SELENOSQ9BQE4 189 aa16.97■□□□□ 0.31
NME3-205ENST00000563854 NUDT9Q9BW91 350 aa16.97■□□□□ 0.31
NME3-205ENST00000563854 ACAT2Q9BWD1 397 aa16.97■□□□□ 0.31
NME3-205ENST00000563854 MFRPQ9BY79 579 aa16.97■□□□□ 0.31
NME3-205ENST00000563854 FBXO6Q9NRD1 293 aaPredicted RBP16.97■□□□□ 0.31
NME3-205ENST00000563854 GALPQ9UBC7 116 aa16.97■□□□□ 0.31
NME3-205ENST00000563854 ZNF451Q9Y4E5 1061 aa16.97■□□□□ 0.31
NME3-205ENST00000563854 MAD1L1Q9Y6D9 718 aa16.97■□□□□ 0.31
NME3-205ENST00000563854 PCSK5Q92824 1860 aa16.97■□□□□ 0.31
NME3-205ENST00000563854 A0A1B0GX78 115 aa16.96■□□□□ 0.31
NME3-205ENST00000563854 SDR42E2A6NKP2 422 aa16.96■□□□□ 0.31
NME3-205ENST00000563854 PEX12O00623 359 aa16.96■□□□□ 0.31
NME3-205ENST00000563854 VSX2P58304 361 aaPredicted RBP16.96■□□□□ 0.31
NME3-205ENST00000563854 FASTKQ14296 549 aaKnown RBP16.96■□□□□ 0.31
NME3-205ENST00000563854 ANKRD20A4Q4UJ75 823 aa16.96■□□□□ 0.31
NME3-205ENST00000563854 ATCAYQ86WG3 371 aa16.96■□□□□ 0.31
NME3-205ENST00000563854 TMEM151BQ8IW70 566 aa16.96■□□□□ 0.31
NME3-205ENST00000563854 DENND6AQ8IWF6 608 aa16.96■□□□□ 0.31
NME3-205ENST00000563854 TTC29Q8NA56 475 aaPredicted RBP16.96■□□□□ 0.31
NME3-205ENST00000563854 DENND1AQ8TEH3 1009 aa16.96■□□□□ 0.31
NME3-205ENST00000563854 COG1Q8WTW3 980 aa16.96■□□□□ 0.31
NME3-205ENST00000563854 SERPINB12Q96P63 405 aa16.96■□□□□ 0.31
NME3-205ENST00000563854 CCDC68Q9H2F9 335 aa16.96■□□□□ 0.31
NME3-205ENST00000563854 XAB2Q9HCS7 855 aaKnown RBP16.96■□□□□ 0.31
NME3-205ENST00000563854 CUTCQ9NTM9 273 aa16.96■□□□□ 0.31
NME3-205ENST00000563854 GPR83Q9NYM4 423 aa16.96■□□□□ 0.31
NME3-205ENST00000563854 SPATA7Q9P0W8 599 aa16.96■□□□□ 0.31
NME3-205ENST00000563854 FAM169AQ9Y6X4 670 aa16.96■□□□□ 0.31
NME3-205ENST00000563854 FER1L5A0AVI2 2057 aa16.96■□□□□ 0.31
NME3-205ENST00000563854 A0A0J9YVX5 310 aa16.95■□□□□ 0.3
NME3-205ENST00000563854 GOLGA6L10A0A0M3HER8 536 aa16.95■□□□□ 0.3
NME3-205ENST00000563854 FAM237BA0A1B0GVD1 139 aa16.95■□□□□ 0.3
NME3-205ENST00000563854 ARHGEF33A8MVX0 844 aa16.95■□□□□ 0.3
NME3-205ENST00000563854 KIF5CO60282 957 aa16.95■□□□□ 0.3
NME3-205ENST00000563854 NRP2O60462 931 aa16.95■□□□□ 0.3
NME3-205ENST00000563854 PHF2O75151 1096 aa16.95■□□□□ 0.3
NME3-205ENST00000563854 CNOT3O75175 753 aaKnown RBP16.95■□□□□ 0.3
NME3-205ENST00000563854 USP1O94782 785 aa16.95■□□□□ 0.3
NME3-205ENST00000563854 MLNP12872 115 aa16.95■□□□□ 0.3
NME3-205ENST00000563854 ATP5DP30049 168 aa16.95■□□□□ 0.3
NME3-205ENST00000563854 ARSFP54793 590 aa16.95■□□□□ 0.3
NME3-205ENST00000563854 CTBP1Q13363 440 aa16.95■□□□□ 0.3
NME3-205ENST00000563854 CUL1Q13616 776 aa16.95■□□□□ 0.3
NME3-205ENST00000563854 SSPNQ14714 243 aa16.95■□□□□ 0.3
NME3-205ENST00000563854 GRM7Q14831 915 aa16.95■□□□□ 0.3
NME3-205ENST00000563854 KLHL38Q2WGJ6 581 aa16.95■□□□□ 0.3
NME3-205ENST00000563854 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.95■□□□□ 0.3
NME3-205ENST00000563854 SPNS2Q8IVW8 549 aa16.95■□□□□ 0.3
NME3-205ENST00000563854 EFCAB3Q8N7B9 438 aa16.95■□□□□ 0.3
NME3-205ENST00000563854 CLEC1AQ8NC01 280 aa16.95■□□□□ 0.3
NME3-205ENST00000563854 OR2L3Q8NG85 312 aa16.95■□□□□ 0.3
NME3-205ENST00000563854 OR2Y1Q8NGV0 311 aa16.95■□□□□ 0.3
NME3-205ENST00000563854 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.95■□□□□ 0.3
NME3-205ENST00000563854 MIB2Q96AX9 1013 aa16.95■□□□□ 0.3
NME3-205ENST00000563854 OSBPL9Q96SU4 736 aa16.95■□□□□ 0.3
NME3-205ENST00000563854 C20orf96Q9NUD7 363 aaPredicted RBP16.95■□□□□ 0.3
NME3-205ENST00000563854 ABCF3Q9NUQ8 709 aa16.95■□□□□ 0.3
NME3-205ENST00000563854 INTS10Q9NVR2 710 aaKnown RBP16.95■□□□□ 0.3
NME3-205ENST00000563854 MAP10Q9P2G4 905 aa16.95■□□□□ 0.3
NME3-205ENST00000563854 VPS9D1Q9Y2B5 631 aa16.95■□□□□ 0.3
NME3-205ENST00000563854 MASP2O00187 686 aa16.94■□□□□ 0.3
NME3-205ENST00000563854 DSCR3O14972 297 aa16.94■□□□□ 0.3
NME3-205ENST00000563854 PRICKLE3O43900 615 aaPredicted RBP16.94■□□□□ 0.3
NME3-205ENST00000563854 DPM1O60762 260 aa16.94■□□□□ 0.3
NME3-205ENST00000563854 CTSVO60911 334 aa16.94■□□□□ 0.3
NME3-205ENST00000563854 CEACAM4O75871 244 aa16.94■□□□□ 0.3
NME3-205ENST00000563854 MATN4O95460 622 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms