RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 LOC102723996A0A087X1L8 192 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 FITM1A5D6W6 292 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 NPIPA5E9PKD4 350 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 FAM227AF5H4B4 570 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 ASNA1O43681 348 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 BUD23O43709 281 aaKnown RBP7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 KLK8O60259 260 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 FTLP02792 175 aaPredicted RBP7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 INHBBP09529 407 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 MAGP20916 626 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 HOXC12P31275 282 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 AKT1P31749 480 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 SHMT2P34897 504 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 CHRNA4P43681 627 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 ALDH6A1Q02252 535 aaKnown RBP7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 EEF1A2Q05639 463 aaKnown RBP7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 KRT81Q14533 505 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 PTPRCAPQ14761 206 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 CDKAL1Q5VV42 579 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 YOD1Q5VVQ6 348 aaPredicted RBP7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 KDELC1Q6UW63 502 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 CLEC9AQ6UXN8 241 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 NEK10Q6ZWH5 1172 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 MCATQ8IVS2 390 aaKnown RBP7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 PRSS58Q8IYP2 241 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 METTL27Q8N6F8 245 aaPredicted RBP7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 OR5AR1Q8NGP9 310 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 SUN3Q8TAQ9 357 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 ZNF398Q8TD17 642 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 TFGQ92734 400 aaPredicted RBP7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 BTBD6Q96KE9 485 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 IMMP1LQ96LU5 166 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 ZNF670Q9BS34 389 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 IRAK4Q9NWZ3 460 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 C3orf18Q9UK00 162 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 ADAM21Q9UKJ8 722 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 NPIPA1Q9UND3 350 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 KLHL20Q9Y2M5 609 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 L3MBTL1Q9Y468 752 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 SCINQ9Y6U3 715 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 MAU2Q9Y6X3 613 aa7.35□□□□□ -1.23
HERPUD1-206ENST00000563343 EML6Q6ZMW3 1958 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 FAM90A27PA6NNH2 459 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 IDSB3KWA1 339 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 DDX3XO00571 662 aaKnown RBP eCLIP7.34□□□□□ -1.232e-17■■■□□ 16.5
HERPUD1-206ENST00000563343 WFS1O76024 890 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 ZWINTO95229 277 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 TSPAN12O95859 305 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 LY6G6DO95868 133 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 GZMAP12544 262 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 ABOP16442 354 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 FERP16591 822 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 MX2P20592 715 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 ACADLP28330 430 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 RAB28P51157 221 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 DLX5P56178 289 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 XIAPP98170 497 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 MYBPHQ13203 477 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 PIGHQ14442 188 aaPredicted RBP7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 GRM7Q14831 915 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 TFDP3Q5H9I0 405 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 SIRPB2Q5JXA9 342 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 RNFT1Q5M7Z0 435 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 ABHD17BQ5VST6 288 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 H3F3CQ6NXT2 135 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 CNSTQ6PJW8 725 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 ARHGEF18Q6ZSZ5 1173 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 HOOK3Q86VS8 718 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 CPNE8Q86YQ8 564 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 GHDCQ8N2G8 530 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 RPRMLQ8N4K4 120 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 CCNYQ8ND76 341 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 DENND1AQ8TEH3 1009 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 NUDT8Q8WV74 236 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 ASB5Q8WWX0 329 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 MIEF2Q96C03 454 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 NPAS2Q99743 824 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 MENTQ9BUN1 341 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 POLDIP3Q9BY77 421 aaKnown RBP7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 ZNF700Q9H0M5 742 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 GLOD4Q9HC38 313 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 ZNF304Q9HCX3 659 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 RIC8BQ9NVN3 520 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 STMN3Q9NZ72 180 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 IL1RAPL1Q9NZN1 696 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 OR6C2Q9NZP2 312 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 LRFN1Q9P244 771 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 MYO1AQ9UBC5 1043 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 MKL2Q9ULH7 1088 aa7.34□□□□□ -1.23
HERPUD1-206ENST00000563343 CUBNO60494 3623 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 MPDZO75970 2070 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 IGLV3-16A0A075B6K0 115 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 IFRD1O00458 451 aaPredicted RBP7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 PRRG2O14669 202 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 TTI1O43156 1089 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 SRP72O76094 671 aaKnown RBP7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 MLYCDO95822 493 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 TPOP07202 933 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 C8BP07358 591 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 MYBL2P10244 700 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms