RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 WT1P19544 449 aaPredicted RBP8.24□□□□□ -1.09
UBR1-204ENST00000563239 CD82P27701 267 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 PSMB5P28074 263 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 FOXM1Q08050 763 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 IL11RAQ14626 422 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 GPR19Q15760 415 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 PHKG1Q16816 387 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.24□□□□□ -1.09
UBR1-204ENST00000563239 FCRL6Q6DN72 434 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 UGT3A1Q6NUS8 523 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 C19orf48Q6RUI8 117 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 CEACAM20Q6UY09 585 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 CDHR3Q6ZTQ4 885 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 UBE2R2Q712K3 238 aaPredicted RBP8.24□□□□□ -1.09
UBR1-204ENST00000563239 LURAP1LQ8IV03 231 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 DNAJC22Q8N4W6 341 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 OR2A1Q8NGT9 310 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 ZNF480Q8WV37 535 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 ANKRD49Q8WVL7 239 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 HNRNPLLQ8WVV9 542 aaKnown RBP8.24□□□□□ -1.09
UBR1-204ENST00000563239 KCNE4Q8WWG9 221 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 NKD1Q969G9 470 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 LINGO1Q96FE5 620 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 PDLIM5Q96HC4 596 aaKnown RBP8.24□□□□□ -1.09
UBR1-204ENST00000563239 ELMO2Q96JJ3 720 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 TEFMQ96QE5 360 aaKnown RBP8.24□□□□□ -1.09
UBR1-204ENST00000563239 FMO2Q99518 471 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 RBBP8Q99708 897 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 CPNE1Q99829 537 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 RHOXF2Q9BQY4 288 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 ZPBPQ9BS86 351 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 SLC12A9Q9BXP2 914 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 CHRNA10Q9GZZ6 450 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 CAB39LQ9H9S4 337 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 FGF21Q9NSA1 209 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 NSMCE4AQ9NXX6 385 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 SLC39A10Q9ULF5 831 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 NFU1Q9UMS0 254 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 PDE10AQ9Y233 779 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 TMEM184BQ9Y519 407 aaPredicted RBP8.24□□□□□ -1.09
UBR1-204ENST00000563239 KLK4Q9Y5K2 254 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 AHCTF1Q8WYP5 2266 aa8.24□□□□□ -1.09
UBR1-204ENST00000563239 ATMQ13315 3056 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 IGKV1-8A0A0C4DH67 115 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 E7ENX8 843 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 SLC16A5O15375 505 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 RRP8O43159 456 aaKnown RBP8.23□□□□□ -1.09
UBR1-204ENST00000563239 KLK10O43240 276 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 NRP2O60462 931 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 SPAG6O75602 509 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 STK17BO94768 372 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 FAM153BP0C7A2 387 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 LIPCP11150 499 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 ZNF37AP17032 561 aaPredicted RBP8.23□□□□□ -1.09
UBR1-204ENST00000563239 MAGP20916 626 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 SAT1P21673 171 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 IMPA1P29218 277 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 OAS2P29728 719 aaKnown RBP8.23□□□□□ -1.09
UBR1-204ENST00000563239 STX2P32856 288 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 GMPRP36959 345 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 GP5P40197 560 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 RGS4P49798 205 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 CSRP3P50461 194 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 PNLIPRP1P54315 467 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 IL2P60568 153 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 TUBB4BP68371 445 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 ACY1Q03154 408 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 TAP2Q03519 686 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 TUBB3Q13509 450 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 ARHGAP19Q14CB8 494 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 ZKSCAN8Q15776 578 aaPredicted RBP8.23□□□□□ -1.09
UBR1-204ENST00000563239 FAM153CQ494X1 144 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 TMEM164Q5U3C3 297 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 PRAMEF17Q5VTA0 474 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 KIAA1614Q5VZ46 1190 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 PWWP2BQ6NUJ5 590 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 TTC23LQ6PF05 361 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 MBOAT1Q6ZNC8 495 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 PPM1NQ8N819 430 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 C19orf47Q8N9M1 422 aaKnown RBP8.23□□□□□ -1.09
UBR1-204ENST00000563239 SLC38A9Q8NBW4 561 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 PPFIBP2Q8ND30 876 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 OR1L3Q8NH93 324 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 MAGEC3Q8TD91 643 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 CDKL2Q92772 493 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 TCTN2Q96GX1 697 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 GPR22Q99680 433 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 RAB11FIP5Q9BXF6 653 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 TXLNGYQ9BZA5 131 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 CDC42EP4Q9H3Q1 356 aaKnown RBP8.23□□□□□ -1.09
UBR1-204ENST00000563239 ACSS3Q9H6R3 686 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 SYNPO2LQ9H987 977 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 PARVBQ9HBI1 364 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 PDE7BQ9NP56 450 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 MTRF1LQ9UGC7 380 aaKnown RBP8.23□□□□□ -1.09
UBR1-204ENST00000563239 IGSF10Q6WRI0 2623 aa8.23□□□□□ -1.09
UBR1-204ENST00000563239 ESPNB1AK53 854 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 STMND1H3BQB6 276 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 CDC7O00311 574 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 TERTO14746 1132 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms