RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 PTRH1Q86Y79 214 aaKnown RBP18.57■□□□□ 0.56
SMPD3-203ENST00000563226 YAF2Q8IY57 180 aa18.57■□□□□ 0.56
SMPD3-203ENST00000563226 GALNT4Q8N4A0 578 aa18.57■□□□□ 0.56
SMPD3-203ENST00000563226 UHRF1Q96T88 793 aaPredicted RBP18.57■□□□□ 0.56
SMPD3-203ENST00000563226 VAPAQ9P0L0 249 aa18.57■□□□□ 0.56
SMPD3-203ENST00000563226 AQP12BA6NM10 295 aa18.56■□□□□ 0.56
SMPD3-203ENST00000563226 C1QTNF3-AMACRE9PGA6 284 aa18.56■□□□□ 0.56
SMPD3-203ENST00000563226 TXNDC9O14530 226 aa18.56■□□□□ 0.56
SMPD3-203ENST00000563226 SOX9P48436 509 aa18.56■□□□□ 0.56
SMPD3-203ENST00000563226 RPS14P62263 151 aaKnown RBP18.56■□□□□ 0.56
SMPD3-203ENST00000563226 SPATS1Q496A3 300 aa18.56■□□□□ 0.56
SMPD3-203ENST00000563226 XKR6Q5GH73 641 aa18.56■□□□□ 0.56
SMPD3-203ENST00000563226 AQP12AQ8IXF9 295 aa18.56■□□□□ 0.56
SMPD3-203ENST00000563226 CXorf40AQ8TE69 158 aa18.56■□□□□ 0.56
SMPD3-203ENST00000563226 GTF2H4Q92759 462 aa18.56■□□□□ 0.56
SMPD3-203ENST00000563226 NR1H4Q96RI1 486 aaPredicted RBP18.56■□□□□ 0.56
SMPD3-203ENST00000563226 AURKCQ9UQB9 309 aa18.56■□□□□ 0.56
SMPD3-203ENST00000563226 PRKAB1Q9Y478 270 aa18.56■□□□□ 0.56
SMPD3-203ENST00000563226 DHRS12A0PJE2 317 aa18.56■□□□□ 0.56
SMPD3-203ENST00000563226 C1orf105O95561 183 aa18.56■□□□□ 0.56
SMPD3-203ENST00000563226 LYNP07948 512 aa18.56■□□□□ 0.56
SMPD3-203ENST00000563226 GDI1P31150 447 aa18.56■□□□□ 0.56
SMPD3-203ENST00000563226 DRD3P35462 400 aa18.56■□□□□ 0.56
SMPD3-203ENST00000563226 DOC2AQ14183 400 aa18.56■□□□□ 0.56
SMPD3-203ENST00000563226 ADNP2Q6IQ32 1131 aa18.56■□□□□ 0.56
SMPD3-203ENST00000563226 DNAJC14Q6Y2X3 702 aaPredicted RBP18.56■□□□□ 0.56
SMPD3-203ENST00000563226 DSG4Q86SJ6 1040 aa18.56■□□□□ 0.56
SMPD3-203ENST00000563226 MRPL38Q96DV4 380 aaKnown RBP18.56■□□□□ 0.56
SMPD3-203ENST00000563226 CMTM7Q96FZ5 175 aa18.56■□□□□ 0.56
SMPD3-203ENST00000563226 TSSK3Q96PN8 268 aa18.56■□□□□ 0.56
SMPD3-203ENST00000563226 BTBD9Q96Q07 612 aa18.56■□□□□ 0.56
SMPD3-203ENST00000563226 HDAC8Q9BY41 377 aa18.56■□□□□ 0.56
SMPD3-203ENST00000563226 TRIM15Q9C019 465 aa18.56■□□□□ 0.56
SMPD3-203ENST00000563226 ZCCHC2Q9C0B9 1178 aaKnown RBP18.56■□□□□ 0.56
SMPD3-203ENST00000563226 TRIM39Q9HCM9 518 aa18.56■□□□□ 0.56
SMPD3-203ENST00000563226 CCM2LQ9NUG4 571 aaPredicted RBP18.56■□□□□ 0.56
SMPD3-203ENST00000563226 DLGAP2Q9P1A6 1054 aa18.56■□□□□ 0.56
SMPD3-203ENST00000563226 TMEM98Q9Y2Y6 226 aa18.56■□□□□ 0.56
SMPD3-203ENST00000563226 TRPM6Q9BX84 2022 aa18.55■□□□□ 0.56
SMPD3-203ENST00000563226 CKAP5Q14008 2032 aa18.55■□□□□ 0.56
SMPD3-203ENST00000563226 C15orf38-AP3S2A0A0A6YYH1 394 aa18.55■□□□□ 0.56
SMPD3-203ENST00000563226 TCRBV5S2A0A599 114 aa18.55■□□□□ 0.56
SMPD3-203ENST00000563226 A6NHS1 94 aa18.55■□□□□ 0.56
SMPD3-203ENST00000563226 MID1O15344 667 aa18.55■□□□□ 0.56
SMPD3-203ENST00000563226 PGRP06401 933 aa18.55■□□□□ 0.56
SMPD3-203ENST00000563226 SDC1P18827 310 aa18.55■□□□□ 0.56
SMPD3-203ENST00000563226 PRPH2P23942 346 aa18.55■□□□□ 0.56
SMPD3-203ENST00000563226 HRH2P25021 359 aa18.55■□□□□ 0.56
SMPD3-203ENST00000563226 PHC1P78364 1004 aa18.55■□□□□ 0.56
SMPD3-203ENST00000563226 ARPINQ7Z6K5 226 aa18.55■□□□□ 0.56
SMPD3-203ENST00000563226 MSRB3Q8IXL7 192 aa18.55■□□□□ 0.56
SMPD3-203ENST00000563226 ADGRG5Q8IZF4 528 aa18.55■□□□□ 0.56
SMPD3-203ENST00000563226 AADATQ8N5Z0 425 aa18.55■□□□□ 0.56
SMPD3-203ENST00000563226 GLB1L3Q8NCI6 653 aaPredicted RBP18.55■□□□□ 0.56
SMPD3-203ENST00000563226 CATSPER1Q8NEC5 780 aa18.55■□□□□ 0.56
SMPD3-203ENST00000563226 OR56A3Q8NH54 315 aa18.55■□□□□ 0.56
SMPD3-203ENST00000563226 ATL1Q8WXF7 558 aa18.55■□□□□ 0.56
SMPD3-203ENST00000563226 APOLD1Q96LR9 279 aa18.55■□□□□ 0.56
SMPD3-203ENST00000563226 FOPNLQ96NB1 174 aa18.55■□□□□ 0.56
SMPD3-203ENST00000563226 ARMC1Q9NVT9 282 aa18.55■□□□□ 0.56
SMPD3-203ENST00000563226 STON1Q9Y6Q2 735 aa18.55■□□□□ 0.56
SMPD3-203ENST00000563226 MAGEA13PA6NCF6 341 aa18.54■□□□□ 0.56
SMPD3-203ENST00000563226 KCNH1O95259 989 aa18.54■□□□□ 0.56
SMPD3-203ENST00000563226 B3GALT4O96024 378 aa18.54■□□□□ 0.56
SMPD3-203ENST00000563226 ZNF26P17031 533 aaPredicted RBP18.54■□□□□ 0.56
SMPD3-203ENST00000563226 TAS2R38P59533 333 aa18.54■□□□□ 0.56
SMPD3-203ENST00000563226 MED21Q13503 144 aa18.54■□□□□ 0.56
SMPD3-203ENST00000563226 NFE2L1Q14494 772 aa18.54■□□□□ 0.56
SMPD3-203ENST00000563226 MAPKAPK3Q16644 382 aa18.54■□□□□ 0.56
SMPD3-203ENST00000563226 TBCELQ5QJ74 424 aa18.54■□□□□ 0.56
SMPD3-203ENST00000563226 LIPJQ5W064 366 aa18.54■□□□□ 0.56
SMPD3-203ENST00000563226 TMEM184AQ6ZMB5 413 aa18.54■□□□□ 0.56
SMPD3-203ENST00000563226 FAM83HQ6ZRV2 1179 aaPredicted RBP18.54■□□□□ 0.56
SMPD3-203ENST00000563226 KLHDC8AQ8IYD2 350 aa18.54■□□□□ 0.56
SMPD3-203ENST00000563226 WDR20Q8TBZ3 569 aa18.54■□□□□ 0.56
SMPD3-203ENST00000563226 EGLN2Q96KS0 407 aa18.54■□□□□ 0.56
SMPD3-203ENST00000563226 SLC28A3Q9HAS3 691 aa18.54■□□□□ 0.56
SMPD3-203ENST00000563226 MSRAQ9UJ68 235 aa18.54■□□□□ 0.56
SMPD3-203ENST00000563226 PPT2Q9UMR5 302 aa18.54■□□□□ 0.56
SMPD3-203ENST00000563226 DPPA5A6NC42 116 aa18.54■□□□□ 0.56
SMPD3-203ENST00000563226 POP7O75817 140 aaKnown RBP18.54■□□□□ 0.56
SMPD3-203ENST00000563226 IL6P05231 212 aa18.54■□□□□ 0.56
SMPD3-203ENST00000563226 ZCCHC18P0CG32 403 aa18.54■□□□□ 0.56
SMPD3-203ENST00000563226 AMD1P17707 334 aa18.54■□□□□ 0.56
SMPD3-203ENST00000563226 HTR1EP28566 365 aa18.54■□□□□ 0.56
SMPD3-203ENST00000563226 GRIA2P42262 883 aa18.54■□□□□ 0.56
SMPD3-203ENST00000563226 DDX39BQ13838 428 aaKnown RBP18.54■□□□□ 0.56
SMPD3-203ENST00000563226 GTDC1Q4AE62 458 aa18.54■□□□□ 0.56
SMPD3-203ENST00000563226 IRAK1BP1Q5VVH5 260 aa18.54■□□□□ 0.56
SMPD3-203ENST00000563226 GALNT13Q8IUC8 556 aa18.54■□□□□ 0.56
SMPD3-203ENST00000563226 ZNF480Q8WV37 535 aa18.54■□□□□ 0.56
SMPD3-203ENST00000563226 EME1Q96AY2 570 aa18.54■□□□□ 0.56
SMPD3-203ENST00000563226 PPWD1Q96BP3 646 aaKnown RBP18.54■□□□□ 0.56
SMPD3-203ENST00000563226 MTERF1Q99551 399 aaKnown RBP18.54■□□□□ 0.56
SMPD3-203ENST00000563226 EBPLQ9BY08 206 aa18.54■□□□□ 0.56
SMPD3-203ENST00000563226 IKZF5Q9H5V7 419 aa18.54■□□□□ 0.56
SMPD3-203ENST00000563226 RPF2Q9H7B2 306 aaKnown RBP18.54■□□□□ 0.56
SMPD3-203ENST00000563226 COQ10BQ9H8M1 238 aa18.54■□□□□ 0.56
SMPD3-203ENST00000563226 SLC6A13Q9NSD5 602 aa18.54■□□□□ 0.56
SMPD3-203ENST00000563226 SLC25A37Q9NYZ2 338 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms