RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 NELL2Q99435 816 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 TACO1Q9BSH4 297 aaKnown RBP17.5■□□□□ 0.39
COMMD4-208ENST00000563220 RTKNQ9BST9 563 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 TDRKHQ9Y2W6 561 aaKnown RBP17.5■□□□□ 0.39
COMMD4-208ENST00000563220 LSM1O15116 133 aaKnown RBP17.5■□□□□ 0.39
COMMD4-208ENST00000563220 KCNJ13O60928 360 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 SLC35G4P0C7Q5 338 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 KELP23276 732 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 OXTRP30559 389 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 PNLIPRP1P54315 467 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 NME5P56597 212 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 TBPL1P62380 186 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 IRF8Q02556 426 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 CUL3Q13618 768 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 CLCA4Q14CN2 919 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 ZRSR2Q15696 482 aaKnown RBP17.5■□□□□ 0.39
COMMD4-208ENST00000563220 CAPN13Q6MZZ7 669 aaPredicted RBP17.5■□□□□ 0.39
COMMD4-208ENST00000563220 DUS1LQ6P1R4 473 aaKnown RBP17.5■□□□□ 0.39
COMMD4-208ENST00000563220 TRIM46Q7Z4K8 759 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 FUNDC1Q8IVP5 155 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 TSACCQ96A04 125 aaPredicted RBP17.5■□□□□ 0.39
COMMD4-208ENST00000563220 WDR92Q96MX6 357 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 RAB3IPQ96QF0 476 aaPredicted RBP17.5■□□□□ 0.39
COMMD4-208ENST00000563220 SGPP1Q9BX95 441 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 TBC1D17Q9HA65 648 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 MRGBPQ9NV56 204 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 CCDC167Q9P0B6 97 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 GPR45Q9Y5Y3 372 aa17.5■□□□□ 0.39
COMMD4-208ENST00000563220 PDYNP01213 254 aa17.49■□□□□ 0.39
COMMD4-208ENST00000563220 KRT6AP02538 564 aa17.49■□□□□ 0.39
COMMD4-208ENST00000563220 KRT6BP04259 564 aa17.49■□□□□ 0.39
COMMD4-208ENST00000563220 JUPP14923 745 aa17.49■□□□□ 0.39
COMMD4-208ENST00000563220 NPPBP16860 134 aa17.49■□□□□ 0.39
COMMD4-208ENST00000563220 KRT6CP48668 564 aa17.49■□□□□ 0.39
COMMD4-208ENST00000563220 PXNP49023 591 aaPredicted RBP17.49■□□□□ 0.39
COMMD4-208ENST00000563220 NEK2P51955 445 aa17.49■□□□□ 0.39
COMMD4-208ENST00000563220 ERVK-8P63133 956 aa17.49■□□□□ 0.39
COMMD4-208ENST00000563220 HMGCS1Q01581 520 aa17.49■□□□□ 0.39
COMMD4-208ENST00000563220 PCDH1Q08174 1060 aa17.49■□□□□ 0.39
COMMD4-208ENST00000563220 DOC2AQ14183 400 aa17.49■□□□□ 0.39
COMMD4-208ENST00000563220 NR6A1Q15406 480 aa17.49■□□□□ 0.39
COMMD4-208ENST00000563220 KIF19Q2TAC6 998 aa17.49■□□□□ 0.39
COMMD4-208ENST00000563220 ATP6AP1LQ52LC2 224 aa17.49■□□□□ 0.39
COMMD4-208ENST00000563220 XKR6Q5GH73 641 aa17.49■□□□□ 0.39
COMMD4-208ENST00000563220 LIPJQ5W064 366 aa17.49■□□□□ 0.39
COMMD4-208ENST00000563220 SUSD1Q6UWL2 747 aa17.49■□□□□ 0.39
COMMD4-208ENST00000563220 Q6ZSR6 202 aa17.49■□□□□ 0.39
COMMD4-208ENST00000563220 RGL4Q8IZJ4 473 aa17.49■□□□□ 0.39
COMMD4-208ENST00000563220 C12orf66Q96MD2 445 aa17.49■□□□□ 0.39
COMMD4-208ENST00000563220 OR2M4Q96R27 311 aa17.49■□□□□ 0.39
COMMD4-208ENST00000563220 C1orf50Q9BV19 199 aa17.49■□□□□ 0.39
COMMD4-208ENST00000563220 PRDM8Q9NQV8 689 aa17.49■□□□□ 0.39
COMMD4-208ENST00000563220 IGHV1OR15-9A0A0B4J2B8 117 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 PRAMEF26H0Y7S4 382 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 SLC28A1O00337 649 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 AIM2O14862 343 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 ITGAXP20702 1163 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 IDSP22304 550 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 HTR1BP28222 390 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 STX1BP61266 288 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 YPEL5P62699 121 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 TSTA3Q13630 321 aaPredicted RBP17.48■□□□□ 0.39
COMMD4-208ENST00000563220 GSTA3Q16772 222 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 AP5B1Q2VPB7 878 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 RFTN2Q52LD8 501 aaPredicted RBP17.48■□□□□ 0.39
COMMD4-208ENST00000563220 RD3Q7Z3Z2 195 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 C2orf73Q8N5S3 287 aaPredicted RBP17.48■□□□□ 0.39
COMMD4-208ENST00000563220 FNDC5Q8NAU1 212 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 SELENOMQ8WWX9 145 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 SLC45A3Q96JT2 553 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 MENTQ9BUN1 341 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 SDR39U1Q9NRG7 319 aaPredicted RBP17.48■□□□□ 0.39
COMMD4-208ENST00000563220 AIG1Q9NVV5 245 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 SNX6Q9UNH7 406 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 SH2B3Q9UQQ2 575 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 KCNE2Q9Y6J6 123 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 A8MUI8 341 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 UGDHO60701 494 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 ZNF217O75362 1048 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 IDO1P14902 403 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 ACADVLP49748 655 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 ABI3BPQ7Z7G0 1075 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 TBC1D21Q8IYX1 336 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 MIER2Q8N344 545 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 OR13H1Q8NG92 308 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 NEIL2Q969S2 332 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 RCN3Q96D15 328 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 FERD3LQ96RJ6 166 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 ACPTQ9BZG2 426 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 TRIT1Q9H3H1 467 aaKnown RBP17.48■□□□□ 0.39
COMMD4-208ENST00000563220 ELOVL6Q9H5J4 265 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 CAAP1Q9H8G2 361 aa17.48■□□□□ 0.39
COMMD4-208ENST00000563220 SCHIP1Q9P0W5 487 aaPredicted RBP17.48■□□□□ 0.39
COMMD4-208ENST00000563220 STK25O00506 426 aa17.47■□□□□ 0.39
COMMD4-208ENST00000563220 TNFRSF10CO14798 259 aa17.47■□□□□ 0.39
COMMD4-208ENST00000563220 CLGNO14967 610 aa17.47■□□□□ 0.39
COMMD4-208ENST00000563220 RGS14O43566 566 aa17.47■□□□□ 0.39
COMMD4-208ENST00000563220 RPN2P04844 631 aa17.47■□□□□ 0.39
COMMD4-208ENST00000563220 ERGP11308 486 aa17.47■□□□□ 0.39
COMMD4-208ENST00000563220 VARSP26640 1264 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms