RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 MRGPRGQ86SM5 289 aa11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 LDB1Q86U70 411 aaPredicted RBP11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 VSIG1Q86XK7 387 aa11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 KRT222Q8N1A0 295 aa11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 BCORP1Q8N888 145 aa11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 OR5K2Q8NHB8 316 aa11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 ACTL9Q8TC94 416 aa11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 VPS37BQ9H9H4 285 aa11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 ABHD10Q9NUJ1 306 aa11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 SLC2A6Q9UGQ3 507 aa11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 TRHDEQ9UKU6 1024 aa11.18□□□□□ -0.62
NSMCE1-202ENST00000561960 LOC105369274A0A096LPK9 316 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 TRBV5-4A0A0C4DH59 114 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 LOC102723532A0A0G2JNH3 316 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 A0A0J9YVX5 310 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 A0A1B0GUH1 482 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 CCDC162PA2VCL2 907 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 GOLGA6L19H0YKK7 550 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 PSTPIP1O43586 416 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 CTSVO60911 334 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 ZRANB2O95218 330 aaKnown RBP eCLIP11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 COX6B1P14854 86 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 GCGRP47871 477 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 HSPA14Q0VDF9 509 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 MFAP5Q13361 173 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 PRPSAP1Q14558 356 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 SF1Q15637 639 aaKnown RBP11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 SLC5A12Q1EHB4 618 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 FCRLBQ6BAA4 426 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 ITPRIPL1Q6GPH6 555 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 FIGLAQ6QHK4 219 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 GDF7Q7Z4P5 450 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 RHOT2Q8IXI1 618 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 TBC1D21Q8IYX1 336 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 OR4N4Q8N0Y3 316 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 OR8K1Q8NGG5 319 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 DLG3Q92796 817 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 CCDC42Q96M95 316 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 VAT1Q99536 393 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 DNAJC7Q99615 494 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 MIPEPQ99797 713 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 SELENOSQ9BQE4 189 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 SYNPO2LQ9H987 977 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 NLE1Q9NVX2 485 aaPredicted RBP11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 ZC3H7BQ9UGR2 993 aaKnown RBP11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 LCMT1Q9UIC8 334 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 TINAGQ9UJW2 476 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 C3orf18Q9UK00 162 aa11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 NIPBLQ6KC79 2804 aaeCLIP11.17□□□□□ -0.62
NSMCE1-202ENST00000561960 SLC5A10A0PJK1 596 aa11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 KLHL33A6NCF5 533 aa11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 HACD1B0YJ81 288 aa11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 FAM227AF5H4B4 570 aa11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 MAP2K7O14733 419 aa11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 PCDH17O14917 1159 aa11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 METTL18O95568 372 aa11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 RBP3P10745 1247 aa11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 ITGAMP11215 1152 aa11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 ACPPP15309 386 aa11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 MSNP26038 577 aaKnown RBP11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 CTNNA2P26232 953 aa11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 SLC1A1P43005 524 aa11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 SNRPNP63162 240 aaKnown RBP11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 CACNG1Q06432 222 aa11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 RPA4Q13156 261 aa11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 SEMA3AQ14563 771 aa11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 SYT16Q17RD7 645 aa11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 WASHC2DQ5SRD0 308 aa11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 ZNF324BQ6AW86 544 aaPredicted RBP11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 TMEM207Q6UWW9 146 aa11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 C3P1Q6ZMU1 363 aa11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 BBS12Q6ZW61 710 aa11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 KATNAL2Q8IYT4 538 aa11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 STT3BQ8TCJ2 826 aa11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 NR4A3Q92570 626 aa11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 FKBP10Q96AY3 582 aa11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 CDKN2AIPNLQ96HQ2 116 aa11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 MENTQ9BUN1 341 aa11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 HES7Q9BYE0 225 aa11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 TRIM8Q9BZR9 551 aa11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 ZNHIT6Q9NWK9 470 aaKnown RBP11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 OR6C2Q9NZP2 312 aa11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 NFS1Q9Y697 457 aa11.16□□□□□ -0.62
NSMCE1-202ENST00000561960 IGHV3-20A0A0C4DH32 117 aa11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 OR2W5A6NFC9 320 aa11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 APOC4-APOC2K7ER74 178 aa11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 LIN7AO14910 233 aaPredicted RBP11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 AP2A1O95782 977 aa11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 WDPCPO95876 746 aa11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 APOC2P02655 101 aa11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 ZGLP1P0C6A0 271 aa11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 PRR35P0CG20 571 aa11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 COX6A1P12074 109 aa11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 CCR7P32248 378 aa11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 TNFSF10P50591 281 aa11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 EFNA3P52797 238 aa11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 ADORA2A-AS1P86434 159 aa11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 TSTA3Q13630 321 aaPredicted RBP11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 GRB7Q14451 532 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms