RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 FAM155BO75949 473 aa8.99□□□□□ -0.97
SMAD3-215ENST00000560424 AP2A1O95782 977 aa8.99□□□□□ -0.97
SMAD3-215ENST00000560424 SLC4A1P02730 911 aa8.99□□□□□ -0.97
SMAD3-215ENST00000560424 CAPN1P07384 714 aa8.99□□□□□ -0.97
SMAD3-215ENST00000560424 GSTA2P09210 222 aa8.99□□□□□ -0.97
SMAD3-215ENST00000560424 ESRRAP11474 423 aaPredicted RBP8.99□□□□□ -0.97
SMAD3-215ENST00000560424 CES1P23141 567 aa8.99□□□□□ -0.97
SMAD3-215ENST00000560424 RPL26P61254 145 aaKnown RBP8.99□□□□□ -0.97
SMAD3-215ENST00000560424 RBPJQ06330 500 aa8.99□□□□□ -0.97
SMAD3-215ENST00000560424 ZBTB17Q13105 803 aa8.99□□□□□ -0.97
SMAD3-215ENST00000560424 KRT33BQ14525 404 aa8.99□□□□□ -0.97
SMAD3-215ENST00000560424 RASA2Q15283 850 aa8.99□□□□□ -0.97
SMAD3-215ENST00000560424 SLC14A2Q15849 920 aa8.99□□□□□ -0.97
SMAD3-215ENST00000560424 ANKRD22Q5VYY1 191 aa8.99□□□□□ -0.97
SMAD3-215ENST00000560424 PID1Q7Z2X4 250 aa8.99□□□□□ -0.97
SMAD3-215ENST00000560424 ZNF295-AS1Q8N0V1 137 aa8.99□□□□□ -0.97
SMAD3-215ENST00000560424 CNTD1Q8N815 330 aa8.99□□□□□ -0.97
SMAD3-215ENST00000560424 GPR150Q8NGU9 434 aa8.99□□□□□ -0.97
SMAD3-215ENST00000560424 OR1L3Q8NH93 324 aa8.99□□□□□ -0.97
SMAD3-215ENST00000560424 GLYATL1Q969I3 302 aa8.99□□□□□ -0.97
SMAD3-215ENST00000560424 C14orf79Q96F83 325 aa8.99□□□□□ -0.97
SMAD3-215ENST00000560424 SERPINB12Q96P63 405 aa8.99□□□□□ -0.97
SMAD3-215ENST00000560424 TDRD1Q9BXT4 1180 aaKnown RBP8.99□□□□□ -0.97
SMAD3-215ENST00000560424 ROPN1BQ9BZX4 212 aaPredicted RBP8.99□□□□□ -0.97
SMAD3-215ENST00000560424 CDC42EP4Q9H3Q1 356 aaKnown RBP8.99□□□□□ -0.97
SMAD3-215ENST00000560424 ROPN1Q9HAT0 212 aaPredicted RBP8.99□□□□□ -0.97
SMAD3-215ENST00000560424 RAD18Q9NS91 495 aa8.99□□□□□ -0.97
SMAD3-215ENST00000560424 IMP3Q9NV31 184 aaKnown RBP8.99□□□□□ -0.97
SMAD3-215ENST00000560424 IFT80Q9P2H3 777 aaPredicted RBP8.99□□□□□ -0.97
SMAD3-215ENST00000560424 FETUBQ9UGM5 382 aa8.99□□□□□ -0.97
SMAD3-215ENST00000560424 PSMD13Q9UNM6 376 aa8.99□□□□□ -0.97
SMAD3-215ENST00000560424 RPL26L1Q9UNX3 145 aaKnown RBP8.99□□□□□ -0.97
SMAD3-215ENST00000560424 BTRCQ9Y297 605 aa8.99□□□□□ -0.97
SMAD3-215ENST00000560424 WDR37Q9Y2I8 494 aa8.99□□□□□ -0.97
SMAD3-215ENST00000560424 AAR2Q9Y312 384 aaKnown RBP8.99□□□□□ -0.97
SMAD3-215ENST00000560424 TCRBV7S3A2A0A539 114 aa8.98□□□□□ -0.97
SMAD3-215ENST00000560424 GSAPA4D1B5 854 aa8.98□□□□□ -0.97
SMAD3-215ENST00000560424 OR6C74A6NCV1 312 aa8.98□□□□□ -0.97
SMAD3-215ENST00000560424 SLC9B1P1A6NJY1 282 aa8.98□□□□□ -0.97
SMAD3-215ENST00000560424 ZNF749O43361 778 aa8.98□□□□□ -0.97
SMAD3-215ENST00000560424 KCNJ13O60928 360 aa8.98□□□□□ -0.97
SMAD3-215ENST00000560424 ANXA9O76027 345 aa8.98□□□□□ -0.97
SMAD3-215ENST00000560424 APRTP07741 180 aa8.98□□□□□ -0.97
SMAD3-215ENST00000560424 HLA-DPA1P20036 260 aa8.98□□□□□ -0.97
SMAD3-215ENST00000560424 CD68P34810 354 aaPredicted RBP8.98□□□□□ -0.97
SMAD3-215ENST00000560424 MAGEA4P43358 317 aa8.98□□□□□ -0.97
SMAD3-215ENST00000560424 SOX8P57073 446 aa8.98□□□□□ -0.97
SMAD3-215ENST00000560424 KRTAP10-9P60411 292 aa8.98□□□□□ -0.97
SMAD3-215ENST00000560424 PPP2R2AP63151 447 aa8.98□□□□□ -0.97
SMAD3-215ENST00000560424 RPE65Q16518 533 aa8.98□□□□□ -0.97
SMAD3-215ENST00000560424 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.98□□□□□ -0.97
SMAD3-215ENST00000560424 CCDC38Q502W7 563 aa8.98□□□□□ -0.97
SMAD3-215ENST00000560424 DNAJC21Q5F1R6 531 aaKnown RBP8.98□□□□□ -0.97
SMAD3-215ENST00000560424 PDPK2PQ6A1A2 396 aa8.98□□□□□ -0.97
SMAD3-215ENST00000560424 LRRC8BQ6P9F7 803 aa8.98□□□□□ -0.97
SMAD3-215ENST00000560424 CYS1Q717R9 158 aa8.98□□□□□ -0.97
SMAD3-215ENST00000560424 ZNF534Q76KX8 674 aa8.98□□□□□ -0.97
SMAD3-215ENST00000560424 CAND1Q86VP6 1230 aaKnown RBP8.98□□□□□ -0.97
SMAD3-215ENST00000560424 AMZ2Q86W34 360 aa8.98□□□□□ -0.97
SMAD3-215ENST00000560424 TRAM1L1Q8N609 369 aa8.98□□□□□ -0.97
SMAD3-215ENST00000560424 OR2Y1Q8NGV0 311 aa8.98□□□□□ -0.97
SMAD3-215ENST00000560424 TADA1Q96BN2 335 aa8.98□□□□□ -0.97
SMAD3-215ENST00000560424 PTERQ96BW5 349 aa8.98□□□□□ -0.97
SMAD3-215ENST00000560424 MTFMTQ96DP5 389 aaKnown RBP8.98□□□□□ -0.97
SMAD3-215ENST00000560424 ZIM3Q96PE6 472 aa8.98□□□□□ -0.97
SMAD3-215ENST00000560424 LYSMD1Q96S90 227 aa8.98□□□□□ -0.97
SMAD3-215ENST00000560424 NAT9Q9BTE0 207 aa8.98□□□□□ -0.97
SMAD3-215ENST00000560424 ADGRE3Q9BY15 652 aa8.98□□□□□ -0.97
SMAD3-215ENST00000560424 MCCC2Q9HCC0 563 aa8.98□□□□□ -0.97
SMAD3-215ENST00000560424 IRAK4Q9NWZ3 460 aa8.98□□□□□ -0.97
SMAD3-215ENST00000560424 KLHL8Q9P2G9 620 aaPredicted RBP8.98□□□□□ -0.97
SMAD3-215ENST00000560424 TEX264Q9Y6I9 313 aa8.98□□□□□ -0.97
SMAD3-215ENST00000560424 SPG11Q96JI7 2443 aa8.97□□□□□ -0.97
SMAD3-215ENST00000560424 E7EVH7 732 aa8.97□□□□□ -0.97
SMAD3-215ENST00000560424 MASP2O00187 686 aa8.97□□□□□ -0.97
SMAD3-215ENST00000560424 MATN2O00339 956 aa8.97□□□□□ -0.97
SMAD3-215ENST00000560424 KLF7O75840 302 aaPredicted RBP8.97□□□□□ -0.97
SMAD3-215ENST00000560424 UNC5CO95185 931 aa8.97□□□□□ -0.97
SMAD3-215ENST00000560424 POLR2CP19387 275 aaPredicted RBP8.97□□□□□ -0.97
SMAD3-215ENST00000560424 PSMB4P28070 264 aa8.97□□□□□ -0.97
SMAD3-215ENST00000560424 CA7P43166 264 aa8.97□□□□□ -0.97
SMAD3-215ENST00000560424 KPNA2P52292 529 aaKnown RBP8.97□□□□□ -0.97
SMAD3-215ENST00000560424 ARG2P78540 354 aa8.97□□□□□ -0.97
SMAD3-215ENST00000560424 DCDP81605 110 aaKnown RBP8.97□□□□□ -0.97
SMAD3-215ENST00000560424 PDIA2Q13087 525 aaKnown RBP8.97□□□□□ -0.97
SMAD3-215ENST00000560424 FRG1Q14331 258 aaKnown RBP8.97□□□□□ -0.97
SMAD3-215ENST00000560424 SLC29A2Q14542 456 aa8.97□□□□□ -0.97
SMAD3-215ENST00000560424 PRPSAP1Q14558 356 aa8.97□□□□□ -0.97
SMAD3-215ENST00000560424 KCTD19Q17RG1 926 aaPredicted RBP8.97□□□□□ -0.97
SMAD3-215ENST00000560424 FNBP1LQ5T0N5 605 aa8.97□□□□□ -0.97
SMAD3-215ENST00000560424 C1orf189Q5VU69 101 aa8.97□□□□□ -0.97
SMAD3-215ENST00000560424 PRAMEF13Q5VWM6 474 aa8.97□□□□□ -0.97
SMAD3-215ENST00000560424 FAAH2Q6GMR7 532 aa8.97□□□□□ -0.97
SMAD3-215ENST00000560424 RPUSD3Q6P087 351 aaKnown RBP8.97□□□□□ -0.97
SMAD3-215ENST00000560424 ZNF449Q6P9G9 518 aa8.97□□□□□ -0.97
SMAD3-215ENST00000560424 TAOK1Q7L7X3 1001 aa8.97□□□□□ -0.97
SMAD3-215ENST00000560424 LINC00523Q86TU6 105 aa8.97□□□□□ -0.97
SMAD3-215ENST00000560424 OR1N1Q8NGS0 311 aa8.97□□□□□ -0.97
SMAD3-215ENST00000560424 UBLCP1Q8WVY7 318 aaPredicted RBP8.97□□□□□ -0.97
SMAD3-215ENST00000560424 NR4A3Q92570 626 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms