RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 PSMD3O43242 534 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 SEC14L5O43304 696 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 COCHO43405 550 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 OAZ2O95190 189 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 NTSR2O95665 410 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 SNAP29O95721 258 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 GPIP06744 558 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 CTXN2P0C2S0 81 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 OCMP0CE72 109 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 CYP2C8P10632 490 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 TNNI3P19429 210 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 ITIH1P19827 911 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 SDHBP21912 280 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 PSMB6P28072 239 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 TACR3P29371 465 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 DCTDP32321 178 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 EIF2S3P41091 472 aaKnown RBP4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 CASRP41180 1078 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 SLC1A3P43003 542 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 LIMS1P48059 325 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 CLK3P49761 638 aaKnown RBP4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 IST1P53990 364 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 PDE1AP54750 535 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 LGALS4P56470 323 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 AP3S2P59780 193 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 ERVFRD-1P60508 538 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 BNC1Q01954 994 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 CYP24A1Q07973 514 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 STX3Q13277 289 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 NOMO1Q15155 1222 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 CHRNA2Q15822 529 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 VAMP3Q15836 100 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 ETFDHQ16134 617 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 TAZQ16635 292 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 LRRC36Q1X8D7 754 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 BTBD16Q32M84 506 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 CHRFAM7AQ494W8 412 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 CMPK2Q5EBM0 449 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 COQ5Q5HYK3 327 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 CDKL4Q5MAI5 379 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 CCNYL2Q5T2Q4 361 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 LRRC66Q68CR7 880 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 ANKRD26P1Q6NSI1 321 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 DUS1LQ6P1R4 473 aaKnown RBP4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 FAM151BQ6UXP7 276 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 CFAP77Q6ZQR2 320 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 P4HA3Q7Z4N8 544 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 YTHDF3Q7Z739 585 aaKnown RBP4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 LUZP2Q86TE4 346 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 AACSQ86V21 672 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 NUDT13Q86X67 352 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 PLD3Q8IV08 490 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 LYSMD2Q8IV50 215 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 SIAH3Q8IW03 269 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 NELFCDQ8IXH7 590 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 SLC35F3Q8IY50 421 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 GSPT2Q8IYD1 628 aaKnown RBP4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 MICU2Q8IYU8 434 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 DSELQ8IZU8 1212 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 THEM5Q8N1Q8 247 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 LRRC17Q8N6Y2 441 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 MB21D1Q8N884 522 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 VGLL2Q8N8G2 317 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 ATP6V0D2Q8N8Y2 350 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 RASGEF1AQ8N9B8 481 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 TC2NQ8N9U0 490 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 PAPD5Q8NDF8 572 aaKnown RBP4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 MCUQ8NE86 351 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 C17orf47Q8NEP4 570 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 GPRC5AQ8NFJ5 357 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 OR4C5Q8NGB2 326 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 OR2D3Q8NGH3 330 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 OR13F1Q8NGS4 319 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 OR13C9Q8NGT0 318 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 OR2I1PQ8NGU4 316 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 WDR48Q8TAF3 677 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 GRAPLQ8TC17 118 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 GRHL3Q8TE85 626 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 DTD1Q8TEA8 209 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 KBTBD7Q8WVZ9 684 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 GTF3AQ92664 365 aaKnown RBP4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 DVL3Q92997 716 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 CD101Q93033 1021 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 LPPQ93052 612 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 CCDC124Q96CT7 223 aaKnown RBP4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 LRIG1Q96JA1 1093 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 B3GALT6Q96L58 329 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 C16orf92Q96LL3 132 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 LRFN5Q96NI6 719 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 CSPG4P5Q96PW8 444 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 DPYSL5Q9BPU6 564 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 TEKT3Q9BXF9 490 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 KRTAP17-1Q9BYP8 105 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 POTEKPQ9BYX7 375 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 TOLLIPQ9H0E2 274 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 CSNK1G1Q9HCP0 422 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 ACSS2Q9NR19 701 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 INIPQ9NRY2 104 aa4.39□□□□□ -1.71
HMGB3P26-201ENST00000560051 MED17Q9NVC6 651 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms