RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 CRTAC1Q9NQ79 661 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 BOLA2-SMG1P6H3BVE0 249 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 AGPSO00116 658 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 PRPS2P11908 318 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 MLC1Q15049 377 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 C1orf94Q6P1W5 598 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 TBL1XR1Q9BZK7 514 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 SEC61A2Q9H9S3 476 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 ZDHHC4Q9NPG8 344 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 LAMP5Q9UJQ1 280 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 HCN2Q9UL51 889 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 NME7Q9Y5B8 376 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 A0A1B0GVI7 797 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 SCAF4O95104 1147 aaKnown RBP13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 ARP10275 920 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 HTD2P86397 168 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 FAM182BQ5T319 152 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 SKA3Q8IX90 412 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 OR10A6Q8NH74 314 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 GPR151Q8TDV0 419 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 PLEKHM1Q9Y4G2 1056 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 MYH3P11055 1940 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 J3QLW9 94 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 APODP05090 189 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 ZNF19P17023 458 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 SSX2Q16385 188 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 TXNRD3Q86VQ6 643 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 DGAT2Q96PD7 388 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 KCNC2Q96PR1 638 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 DUSP16Q9BY84 665 aa13.58□□□□□ -0.24
CSPG4P12-202ENST00000559989 MEN1O00255 615 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 SCAMP3O14828 347 aaKnown RBP13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 CCND3P30281 292 aaPredicted RBP13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 SPAM1P38567 509 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 CRISP3P54108 245 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 BNIP3Q12983 259 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 STYK1Q6J9G0 422 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 CREG2Q8IUH2 290 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 CASTOR1Q8WTX7 329 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 SLC25A36Q96CQ1 311 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 TM9SF2Q99805 663 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 YTHDF1Q9BYJ9 559 aaKnown RBP13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 FBXO5Q9UKT4 447 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 USP42Q9H9J4 1324 aaKnown RBP13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 TRAV6A0A075B6T7 132 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 RPP14O95059 124 aaKnown RBP13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 CHST9Q7L1S5 443 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 BARD1Q99728 777 aaKnown RBP13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 TMEM39BQ9GZU3 492 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 LRRC19Q9H756 370 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 DUXAA6NLW8 204 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 C8GP07360 202 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 PKMP14618 531 aaKnown RBP13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 POLR2J3Q9H1A7 115 aaKnown RBP13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 RLIMQ9NVW2 624 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 P2RX2Q9UBL9 471 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 F8VP50 259 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 STK16O75716 305 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 CAPN3P20807 821 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 IGFBP4P22692 258 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 PPATQ06203 517 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 ZNF529Q6P280 563 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 C17orf113A0A1B0GUU1 675 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 C2orf92A0A1B0GVN3 265 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 F5H0A9 414 aaPredicted RBP13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 FADDQ13158 208 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 GPR157Q5UAW9 335 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 KLHDC10Q6PID8 442 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 BAIAP2L2Q6UXY1 529 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 FAM124AQ86V42 546 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 TTLQ8NG68 377 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 EBPLQ9BY08 206 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 DHX33Q9H6R0 707 aaKnown RBP13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 PLK2Q9NYY3 685 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 ANXA8P13928 327 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 FXYD6P3P58550 94 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 TATDN1Q6P1N9 297 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 CLEC10AQ8IUN9 316 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 MFSD2AQ8NA29 543 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 ASPNQ9BXN1 380 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 TLR4O00206 839 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 RCBTB2O95199 551 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 IL33O95760 270 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 IGKV5-2P06315 115 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 NUDT17P0C025 328 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 NPTX1Q15818 432 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 SLC26A9Q7LBE3 791 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 ESX1Q8N693 406 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 TMEM41AQ96HV5 264 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 ZNF558Q96NG5 402 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 SLC38A3Q99624 504 aa13.57□□□□□ -0.24
CSPG4P12-202ENST00000559989 SAMD9LQ8IVG5 1584 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 FRMPD4Q14CM0 1322 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 EME2A4GXA9 379 aaPredicted RBP13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 PIP5K1CO60331 668 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 IL7P13232 177 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 NTRK2Q16620 822 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 TBRG1Q3YBR2 411 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 ARL9Q6T311 187 aa13.56□□□□□ -0.24
CSPG4P12-202ENST00000559989 ZNF283Q8N7M2 679 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms